gpa33a


Basic Information

Item Value
gene id gpa33a
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2647427 ~ 2654848 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250987.1
TAATACAGTTCTCACAGATCGATTAGGACCTGTGTTGCTCTTCATAAGCAGAAGTTAGACACACATTACTGTGGTCTCTGTGTTGATCTCACACAAGAAACTGTGAGACAGACAGGAGAACCAGGGCAAGACGAGACTCGACGGCGGGGCGGTGCTCTTCGTTTCCAGCGTCTCATTGGCTAAGAGAGAGAGTTTGAGCGCCTTCAACACCTTCGGTTCATACCTGAGACGCTGCTGGACGCTCACAGAAATGGAAGGAACGCTGGGAATATTTGGGATATGTCTGCTCTTCGCTGGAGTTCACATGACTTCGGGCACAACCGTAAACATCCCAGATCCGGAATATAAGATTGCGAGGGGTGATAATGTGATCATACCCTGCACTTTCACACCAGGTAACACTATCGTGTCAATATCTTGGACAGCAGAGCCAGATGTACAGGGTCAATCAGAGATTAAAGTTGTTGATTACTTCATTACCGGGAATAAAATGACGGTATTCAAGAAATATAAAGGCAGGGCAAGTGTAGTTGTGGATATGGCCAAAGGAACAGCCAACCTGCAGCTCCAGAGTGTCACCAGCGCAGACACACGGGCCTACGAGTGTAAAGTCCAGGACCCGGACGATGAGGAGGGCAATCTGTCGGACACGGCCAAACTCATAGTCCTGGTGGCTCCATCGACGCCCGTCTGCAGTGTTGTGGGGAAGGCAGAATACTTCGAGAACATCGAGCTGACCTGCCGCTCTGAGGAGGGAACCCCGACGCCGACTTACAAATGGCAAATCTACAGCGTCAGTAATGTCCCAAAACCCCTGCCGCCGAAGGCCACTGaccTAAACGGAGTTTTGTCTCTTGTCAACATTTCCATGGACACCTCTGGCTACTACACCTGCACATCCACCAATGAAATCAGATCTGCAAAGTGTAATCTGACCCTGGCTGTCATGCCTCCGTCCATGAACTTGGCCTCCACAGCCGGGATCATCGGAGCTGTGGTGTGTGTAGCTGTTCTTCTGGGAATCATCGTCCtcatctgctgctgctgccgtCGCAGGAGAAAACAGGCTGAGGAATACGCAATGGGAACTCCTGAAGAGTTCACAGACAAGGACCCTGAAGGAAGAGCGGACGAGCGCGCCGAACACGTGAACCAGGAGGAAGAGCGTCGCGTGAAAAGCGCAGACAAGCGCGACCCACCTGACGACCGCAGCGAGAAGAGCTACGATCGGCGCAGCGACTACGACGACCGGAGAGAGCAGTACAACGACAGACGAGACGACCGCGGCGACCGGCGCGAGAGGTACGATAGAGACGACCGGCGCGACCGTTACGACGATCGCAGAGACCAATACGATGACCGTCACGATCGCTACGACGACCGCAGAGATCGTTATGATGATCGCAGAGACCGCTACGACGATCGCAGAGACCGCTATGATGACCGCTACGATAGCGACCGTTATTCCGACCGCTACGACAGTCGCGACAGACCTCCTAGCGTTCCACCGAACAAACCCAGAGAACCACGGAACTGAGGTGAGCAGGCGCAGAGTCGATcctcagaaatacacagaaacTAGAGAAAATGGACAAATAAAGGTTTTAGTACCTCATATGCTGAATATGAAATTTGACAGAATAAGGGGCGTGTTTACACGTTGGTGTCTTTTTTGACAAGAAAAAGCTTCCAAGAGCAGGGTTTTACTTACAAACAGCAGCCAAGGACGTCttttgttgctatagcaactGCAGCAACAGTAGCCTGTGTCCTGgggaaaaatatcaataaagttCTTGCGTCATCTTTTGAAGTTAACGCGAAGGTGAATATTATTCACAATGACGTTCGTGGGAATGTAAATACAGGGAAGAAAACAGTATGAGGGCTTACAACAATCTAGTCCCGGAGCCTGGATAAGCAGAATATTTTAGACTATATCAAAGACTACCCAAGAATATCAAAGAATACCCAAGACGTGTCACAAAAGCAACGCTTAACATAGCTGATCAATCTCCAGCCGCTGATTCATAAGGTCAGGGGTCACCGCGTCGGACAGGTTCGGGTTGTCTAGGGCTGCACTGATCTCGATCTCATCTGAgagaaaaaacttttataacGTTGAGCgaaagaaacaacatttattatacagttgTTGTCAGACATTACTGGTGACTTCAATTCTGAAATTTACTCGAAAGCTTAGTGAACCGTTTGGGAGTATTAGATGTTTCCACATTCAAAGAGATCttctgcatttttctttttgttgtcaTGTAAACGACTCGCTGCTGGCTTGTGATTGGTCAGCTCTAAAAAATGTGCTTGATGTAAGgttttttcagaaatgttatttcaacTTGAAAAGACGTCCTGATCTGCAGAAAAGATGCCGGTGATGACAACTAAAAAAACCACTCAACTCTGCtttgtcctgcaaagtttagctccaagtctaatcaaatacacctgctttttattttcaagcgatcctgaagacctttagtcaggtgtgtttgattagagctgGACTTTTCAGGACAGTAGTTCTGATTCACTCCACAGAAGTATAATGTAAAACAGTCTctgaccattttaaaaaaaagacaccgATTGTAAACATAGCCTAAAGGTCTTCAATACATCTACCACCACACTCTcttatgtgtttatgttttaatgtgaaataatgGGGTTggtttgctgtttatttgtattgttacaACCGAACTGTATTCACGTCCATGTTGTAGTtctgtttctttattctttagATCTTTCATGACTCTTTATTGACgtgctttatttttgcattgtttcaaaataaaacgttCAAGTAAATTCACACAGGTCTCACTGAAGTTCCTGATTAAGATGTTTAATATTCAGGCTTCTGTTTTAAAGCTGAACTTCTCTCTTCATTATGAGTCATTGTTATGAAAAGCGGTCCTGTAGCTCATGATGACGTCGGTCTGAGAGTTTTGCACAAGGCCATTTTCAGCCaagatgtaattaaatataattattctttaatattcAAGTGGCATCATGTTAAGGAAAATGTGTTCAGCTGTATATGACAGAAATGTATTGTTCGACCTGGGGATGctgttttttatgattaatttgATCTGCTTTTGATTGATTCTACACACGTTCTGATATCGTTTCTcgtgtcatttattttgcagGATGTTACATGACAACCATTAAATACGTGTTTTTGCTAA

Function

GO: NA

KEGG:

id description
K06790 GPA33; cell surface A33 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250987.1 True 3230 mRNA 0.45 7 2647427 2654848

Neighbor

gene id symbol gene type direction distance location
cd247 cd247 coding upstream 73450 2564546 ~ 2573977 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding upstream 83008 2561357 ~ 2564419 (+)
adprhl1 adprhl1,LOC107694472 coding upstream 165868 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 241140 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 259778 2371927 ~ 2387649 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 1285 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 23450 2678298 ~ 2690765 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding downstream 36894 2691742 ~ 2700224 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding downstream 84829 2739677 ~ 2742411 (+)
LOC122353699 NA coding downstream 87231 2742079 ~ 2742212 (+)
G527 NA non-coding upstream 20023 2626045 ~ 2627404 (+)
G486 NA non-coding upstream 41350 2603191 ~ 2606077 (+)
G518 NA non-coding upstream 58419 2588687 ~ 2589008 (+)
G517 NA non-coding upstream 58754 2588445 ~ 2588673 (+)
G512 NA non-coding upstream 63780 2579316 ~ 2583647 (+)
G538 NA non-coding downstream 48674 2703522 ~ 2720923 (+)
G546 NA non-coding downstream 71452 2726300 ~ 2730720 (+)
G719 NA non-coding downstream 631101 3285949 ~ 3286202 (+)
G771 NA non-coding downstream 1065416 3720264 ~ 3720539 (+)
LOC122341420 NA non-coding downstream 1365249 4020097 ~ 4024338 (+)
G482 dusp27 other upstream 51125 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 88900 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 120183 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 129042 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 158324 2483640 ~ 2489103 (+)
G727 NA other downstream 679810 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 981859 3636707 ~ 3699093 (+)
G824 NA other downstream 1701850 4356698 ~ 4357260 (+)
G826 NA other downstream 1703159 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 2283333 4938181 ~ 4944841 (+)

Expression


Co-expression Network