LOC122353624 (LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062)


Basic Information

Item Value
gene id LOC122353624
gene name LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 3695165 ~ 3701245 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251462.1
ttctctctccgaTTGTCTTACCATCGCCATCACCCTTCAATTATGCTGTTGCGTAAAATAAGATAGAGAGAGGGCAGTGTGCGAGCAACATTGTGCACGAAGCTCTTATTTTAAGTCCTCTCATAAATATTCCACCCTGCCCCAAATTTACAATTGATCTGACGACAGTACAGCAACAGTGAGCCAATGGAAATCCAAGTTCCACTAGTTGAAACACTAGTTAAGATGGCAACACATCTCCAAAGACGGATTTATGGGAACCTCTTGccaaaacaagaataaaaaaaatacagaaatatgaaAACAGACAACACGGCATTGGAGGAACCAGAGATCAGCGAAGAAATCACATGTACATCCGGCAATATACAACGCGATACCAGCCGTACCACTCACAAGCGTCTCGGGGATGCGTACTTTGCGCGTCCGTTCCTGAGAAAAAGGGATAGACTGCCTTGCTCGTGGATACATTTCGTTTAAAATGGACATTGCACTGGTTGGATTTTGCCAAGGAAGGGCAACGCACATCAAGCGAAATTCCTAAACTTGCGTTTTTCCTATTTTCAGCCAGCTGACCGTCACGTTTCCAGGGAGAGTTTGCGATACCCAGGCTGATCACGAACCGCTTCACGGATTATTATACAGTCGGGCTAAAGAGGCACCGGCGTCTTCAAGGTTATGGATTGGCCGTGCTCATGATGTTTTCGAATTTACCACGTTTAAGCGGATGACACCTCAAACTGCAACTGCACTACCGTGAGCTGGGCCATTCCTGCACAAGAAAATGCATATCTGGATACTGAAAATAATATTGCTGGTTGCCACATCTCTGAGTCTGGTTGAGATGTATGACAATTATGGGGAGATCTGTAGGAATCTGTGCACTTGCGAGGAGAAGGAAGGCATTCTGACGGTCAGTTGTGAGAACAGGGGCATTGTGCGGCTGTCGGAAATAAGCCCAGTTCAGTTTTCTATGTACCATCTTTTGCTGACAGGTAATTTGCTGAAAAGACTATCTGTCAATGACTTCATCAACTATACTGGAGTTACTATTTTGCATTTAGGTAATAATGACATATCTGAGGTGGAGACCGGGGCTTTCAACGGGCTCCAAGGATTAAAGAGATTACATTTGAACAATAACAAAATAGACATGCTAAGGGATGACACTTTCGTCGGACTCGAGAGCCTAGAATACCTTCAGATAGACTATAATTTCATTAGCACTATTGAACCTAATGCTCTGAGCAGGCTTCAGCAACTGACTGTGCTTATTCTCAATGACAACTTGTTGTCCTCTTTGCCCACAAACATTTTCCGGAATGTGCCCTTGACGCACCTGGATCTTAGGGGCAACCGCTTAAAAATGTTCCCTTACATCGGCCTTTTGGAGCATATGGACAAAGTAGTGGAATTACAGCTTGAGGAGAATCCGTGGAATTGTTCCTGCGAGCTCATTGCGCTTAAGGCTTGGCTGGAAAGCATCGCCTACACAGCTCTGGTGGGGGAGGTGGTATGTGAGACTCCTTTCAGGCTCCATGGCAGGGATCTGGACGAGGTCTCAAAGCAGGAACTGTGTCCCAGAAGGGCCATATCAGAGTACGAGATGCGGCCTCCACCCCCACTCAGCACCAGCGGCTATTTCCAGACCACACCGGCGGCCGTGACGGCATCAGCCACATCTTCGGCCGTCCTGCGATCCTCGTCCAGGCCGACCAAGGGCACACGGCAACCCGGCAAAACCAAGTCCAAGCCTACTTCTCGAATCCCAGCCAACCCCTACAACTATGGGCCCATCATTGCTTTTCAGACCAAATCTCCCGTGCCTTTGGACTGCCCCACCACATGTACATGCAATCTACAGATCTCCGACCTGGGGCTAAATGTCAACTGCCAGGAGAGGAAGATTGAAAACATATCAGATCTGAAGCCCAAGCCATACAATCCTAAAAAGATGTATCTCACAGGGAACTACATCCCTGTCGTTCGTAGATCTGACTTTGTGGAGGCTGAGGGACTGGATTTATTGCACCTGGGAAACAATCGGATAGCACTCATACACGACAGAGCCTTTGGGGATTTAATTAACCTACGTAGGCTGTACTTGAATGGCAATTTGATTGACAGACTCACAGCAGATATGTTCTTTGGGTTAAAAAGTCTGCAGTACTTgtatttagaatataataagATTCGAGAGATTGTAGGTGGCACCTTCCGCTTTGTGCCCAACCTTCAGTTACTTTTCCTCAATaacaatcttttaaaaacattgccAGGAGGCATCTTCTCTAGTCTGTCTCTCTCCCGACTCAACCTTCGCAGCAACCACTTTCAAAACCTGCCTGTCAGCGGAGTTCTGGACCAGCTGAAAGCACTGGTCCAGATTGACCTATTTGAGAACCCTTGGGACTGCTCCTGCGATGTGGTCGGCATGAAGATCTGGCTGGAGCAGCTAAACACAGGAACAGTGGTCAATGATGTCAAATGCGTGACTCCCAAGCGGCTCGCGGGCCAGGATATGCGGGTTGTCCCCTCTGAGCAATTATGTCCAGATTACTCCGATGTCATCGTCTCCACCGTGGTTCCTTCTGAGGAGCCTTCTGCAGACAGGATCACCACCACGGAGACACCCCAGAGGTTTAACACCCATTCCAGTAACGTTCCTTTGTCTGTCCTCATTCTCAGCCTCCTCCTTGTTTTCATTATGTCGGTGTTTGTGGCAGCCGGCCTGTTTGTGGTGGTGATGAAGAGGCGTAAAAAGTCTCAGAGCGACCGTACCAGCACAAACAACTCTGATGTGAGCTCCTTCAACCTGCAGTACAATCTCTATAGCAATCGCTCCGTTCCCAAGGTCAAGGCCCCAGCGGGTCATGTCTATGAGTACATTCCCCATCCGTTAGGTCACATGTGCAAAAACCCAATCTACAGGTCCCGGGAAGGGAATGCTGTGGAGGATTACCCTGATCTACACGAACTCAAGGTCACCTACAGGAGTAATGCTGACGAGGACCAGGAGGTCACCTTGAGGAGCCCGAATTACACAGTGAGCACCATCGAGCCTCGTGAGCAGCCGTCCCCTGTCCAGGATGCAGAACACTTTTTCCGAGGAATCCTGGAGCCGGATAAATCCCCATCGACTGCTGGCAGCAGGTTTGAATATAAGTACACTGGCCCCGTCCCGTACACATACCAACCAAACTTCGACGTCAGGCGCCAGTTCTTACATCCAGAAGGAATACGAGAGACTATGCTATATGGCACAGCGCCAAGTACTGTCTTTGTGGAGCCCAATAGAAACGACTATTTGGAACTAAAGGCAAAACTTCAAATAGAGCCGGACTACCTCGAAGTTCTTGAGAAACAGACAACACAGAGCCAGTTTTAAATGTTGGGCTATCTATAAATGCAGTAGATGCATTTTTCCCCTTGTACTGACTCAAACTGGAGGGTGCCTTGGCACAACATACATCAAcgtaaagagaaaaaaaaaagtccaaatccTTAAGTGGGGTGTGCCGAACTATGTTACTTTAATTTCAGAACCACATGGCATTACAGAAATATCtaagaatgaaaacaaataaatagagcTCGCGGAACTTGGATGAAAGCACGAGTTGTGATATAAAACTGGCGAtgcaaaaatctatttttttaagtggaTGATTGAATACTCATAAATCTAAGTGTACAGGTTAATCTCACCCAAATACATTTTCAGGAATATAATCATACAAATATTGTGAATTTAAAGAGGTCGGGGAGGGGTTTCGCaaacaagaacaaaagaaaaaaaacaaaaaacaaaaaaaaaacacaactttctGACAGAAACACTATACAGCAGCGCATCCAATCGAGCAGGACAATTTCTCTGCTTTAGTCTGTAAGTAAGTACTGTATTTATTGGTATACTCTTTGCCatgtattttcaacattttttcaatGCTCATCAATATTATGTGTGTCATGTCCCATTCTCTGTACGAACATTTTGTTTGTAGTTTCCGATCACTTACTGTAGCTTGCATTGTACAAGTGGCTTTTTTTCAGCAGTGGCACACCCCAATGTCGAAGAGAGACTTTGCATCATTTAACAATTTCAAAGGAAAAGTGTCTTTGTATGCTGTCTGCACTTTTTTGGAAGATGGAAGGCCACAGGGCCTTCCCAGCTAACGTTagaagaaatattatatattaaaaatgaatatgtgtATTCATtcttaatatgtatttttaatatgttatatcaaaattcataaataataattgaagtAATAATTATGTTGTGTAATACtgatattttaatgtaacacCTATTTTTATACAAGCATTCGCAATTCTCTTTCCCTTATCGTTTCCATTGTTTTGATTGCTTTGCACTTATTGCACTATATTGaccaaaatatgtttatgtcaTCAATAAATATGATGTCGGTT
>XM_043251470.1
ttctctctccgaTTGTCTTACCATCGCCATCACCCTTCAATTATGCTGTTGCGTAAAATAAGATAGAGAGAGGGCAGTGTGCGAGCAACATTGTGCACGAAGCTCTTATTTTAAGTCCTCTCATAAATATTCCACCCTGCCCCAAATTTACAATTGATCTGACGACAGTACAGCAACAGTGAGCCAATGGAAATCCAAGTTCCACTAGTTGAAACACTAGTTAAGATGGCAACACATCTCCAAAGACGGATTTATGGGAACCTCTTGccaaaacaagaataaaaaaaatacagaaatatgaaAACAGACAACACGGCATTGGAGGAACCAGAGATCAGCGAAGAAATCACATGTACATCCGGCAATATACAACGCGATACCAGCCGTACCACTCACAAGCGTCTCGGGGATGCGTACTTTGCGCGTCCGTTCCTGAGAAAAAGGGATAGACTGCCTTGCTCGTGGATACATTTCGTTTAAAATGGACATTGCACTGGTTGGATTTTGCCAAGGAAGGGCAACGCACATCAAGCGAAATTCCTAAACTTGCGTTTTTCCTATTTTCAGCCAGCTGACCGTCACGTTTCCAGGGAGAGTTTGCGATACCCAGGCTGATCACGAACCGCTTCACGGATTATTATACAGTCGGGCTAAAGAGGCACCGGCGTCTTCAAGGTTATGGATTGGCCGTGCTCATGATGTTTTCGAATTTACCACGTTTAAGCGGATGGAATCGGGCTATAATCGATGACGTCGCTTCTGCTTTTAATCAACTCGCGTCTTTGTCGCCCGAGGGATGAGCTATGACTGTCACATATAGCATCAAAGGGAGAAATTCAACATAGGCACCTTTGTGAAACGTAGATGTGTCGTGCACTCCGAGGTTTAACTTCGATACTGGTTGAGAGTTGATAAAAAAACTGAAGTCGTCGGATATGTGGGATGACACCTCAAACTGCAACTGCACTACCGTGAGCTGGGCCATTCCTGCACAAGAAAATGCATATCTGGATACTGAAAATAATATTGCTGGTTGCCACATCTCTGAGTCTGGTTGAGATGTATGACAATTATGGGGAGATCTGTAGGAATCTGTGCACTTGCGAGGAGAAGGAAGGCATTCTGACGGTCAGTTGTGAGAACAGGGGCATTGTGCGGCTGTCGGAAATAAGCCCAGTTCAGTTTTCTATGTACCATCTTTTGCTGACAGGTAATTTGCTGAAAAGACTATCTGTCAATGACTTCATCAACTATACTGGAGTTACTATTTTGCATTTAGGTAATAATGACATATCTGAGGTGGAGACCGGGGCTTTCAACGGGCTCCAAGGATTAAAGAGATTACATTTGAACAATAACAAAATAGACATGCTAAGGGATGACACTTTCGTCGGACTCGAGAGCCTAGAATACCTTCAGATAGACTATAATTTCATTAGCACTATTGAACCTAATGCTCTGAGCAGGCTTCAGCAACTGACTGTGCTTATTCTCAATGACAACTTGTTGTCCTCTTTGCCCACAAACATTTTCCGGAATGTGCCCTTGACGCACCTGGATCTTAGGGGCAACCGCTTAAAAATGTTCCCTTACATCGGCCTTTTGGAGCATATGGACAAAGTAGTGGAATTACAGCTTGAGGAGAATCCGTGGAATTGTTCCTGCGAGCTCATTGCGCTTAAGGCTTGGCTGGAAAGCATCGCCTACACAGCTCTGGTGGGGGAGGTGGTATGTGAGACTCCTTTCAGGCTCCATGGCAGGGATCTGGACGAGGTCTCAAAGCAGGAACTGTGTCCCAGAAGGGCCATATCAGAGTACGAGATGCGGCCTCCACCCCCACTCAGCACCAGCGGCTATTTCCAGACCACACCGGCGGCCGTGACGGCATCAGCCACATCTTCGGCCGTCCTGCGATCCTCGTCCAGGCCGACCAAGGGCACACGGCAACCCGGCAAAACCAAGTCCAAGCCTACTTCTCGAATCCCAGCCAACCCCTACAACTATGGGCCCATCATTGCTTTTCAGACCAAATCTCCCGTGCCTTTGGACTGCCCCACCACATGTACATGCAATCTACAGATCTCCGACCTGGGGCTAAATGTCAACTGCCAGGAGAGGAAGATTGAAAACATATCAGATCTGAAGCCCAAGCCATACAATCCTAAAAAGATGTATCTCACAGGGAACTACATCCCTGTCGTTCGTAGATCTGACTTTGTGGAGGCTGAGGGACTGGATTTATTGCACCTGGGAAACAATCGGATAGCACTCATACACGACAGAGCCTTTGGGGATTTAATTAACCTACGTAGGCTGTACTTGAATGGCAATTTGATTGACAGACTCACAGCAGATATGTTCTTTGGGTTAAAAAGTCTGCAGTACTTgtatttagaatataataagATTCGAGAGATTGTAGGTGGCACCTTCCGCTTTGTGCCCAACCTTCAGTTACTTTTCCTCAATaacaatcttttaaaaacattgccAGGAGGCATCTTCTCTAGTCTGTCTCTCTCCCGACTCAACCTTCGCAGCAACCACTTTCAAAACCTGCCTGTCAGCGGAGTTCTGGACCAGCTGAAAGCACTGGTCCAGATTGACCTATTTGAGAACCCTTGGGACTGCTCCTGCGATGTGGTCGGCATGAAGATCTGGCTGGAGCAGCTAAACACAGGAACAGTGGTCAATGATGTCAAATGCGTGACTCCCAAGCGGCTCGCGGGCCAGGATATGCGGGTTGTCCCCTCTGAGCAATTATGTCCAGATTACTCCGATGTCATCGTCTCCACCGTGGTTCCTTCTGAGGAGCCTTCTGCAGACAGGATCACCACCACGGAGACACCCCAGAGGTTTAACACCCATTCCAGTAACGTTCCTTTGTCTGTCCTCATTCTCAGCCTCCTCCTTGTTTTCATTATGTCGGTGTTTGTGGCAGCCGGCCTGTTTGTGGTGGTGATGAAGAGGCGTAAAAAGTCTCAGAGCGACCGTACCAGCACAAACAACTCTGATGTGAGCTCCTTCAACCTGCAGTACAATCTCTATAGCAATCGCTCCGTTCCCAAGGTCAAGGCCCCAGCGGGTCATGTCTATGAGTACATTCCCCATCCGTTAGGTCACATGTGCAAAAACCCAATCTACAGGTCCCGGGAAGGGAATGCTGTGGAGGATTACCCTGATCTACACGAACTCAAGGTCACCTACAGGAGTAATGCTGACGAGGACCAGGAGGTCACCTTGAGGAGCCCGAATTACACAGTGAGCACCATCGAGCCTCGTGAGCAGCCGTCCCCTGTCCAGGATGCAGAACACTTTTTCCGAGGAATCCTGGAGCCGGATAAATCCCCATCGACTGCTGGCAGCAGGTTTGAATATAAGTACACTGGCCCCGTCCCGTACACATACCAACCAAACTTCGACGTCAGGCGCCAGTTCTTACATCCAGAAGGAATACGAGAGACTATGCTATATGGCACAGCGCCAAGTACTGTCTTTGTGGAGCCCAATAGAAACGACTATTTGGAACTAAAGGCAAAACTTCAAATAGAGCCGGACTACCTCGAAGTTCTTGAGAAACAGACAACACAGAGCCAGTTTTAAATGTTGGGCTATCTATAAATGCAGTAGATGCATTTTTCCCCTTGTACTGACTCAAACTGGAGGGTGCCTTGGCACAACATACATCAAcgtaaagagaaaaaaaaaagtccaaatccTTAAGTGGGGTGTGCCGAACTATGTTACTTTAATTTCAGAACCACATGGCATTACAGAAATATCtaagaatgaaaacaaataaatagagcTCGCGGAACTTGGATGAAAGCACGAGTTGTGATATAAAACTGGCGAtgcaaaaatctatttttttaagtggaTGATTGAATACTCATAAATCTAAGTGTACAGGTTAATCTCACCCAAATACATTTTCAGGAATATAATCATACAAATATTGTGAATTTAAAGAGGTCGGGGAGGGGTTTCGCaaacaagaacaaaagaaaaaaaacaaaaaacaaaaaaaaaacacaactttctGACAGAAACACTATACAGCAGCGCATCCAATCGAGCAGGACAATTTCTCTGCTTTAGTCTGTAAGTAAGTACTGTATTTATTGGTATACTCTTTGCCatgtattttcaacattttttcaatGCTCATCAATATTATGTGTGTCATGTCCCATTCTCTGTACGAACATTTTGTTTGTAGTTTCCGATCACTTACTGTAGCTTGCATTGTACAAGTGGCTTTTTTTCAGCAGTGGCACACCCCAATGTCGAAGAGAGACTTTGCATCATTTAACAATTTCAAAGGAAAAGTGTCTTTGTATGCTGTCTGCACTTTTTTGGAAGATGGAAGGCCACAGGGCCTTCCCAGCTAACGTTagaagaaatattatatattaaaaatgaatatgtgtATTCATtcttaatatgtatttttaatatgttatatcaaaattcataaataataattgaagtAATAATTATGTTGTGTAATACtgatattttaatgtaacacCTATTTTTATACAAGCATTCGCAATTCTCTTTCCCTTATCGTTTCCATTGTTTTGATTGCTTTGCACTTATTGCACTATATTGaccaaaatatgtttatgtcaTCAATAAATATGATGTCGGTT

Function

NR:

description
PREDICTED: SLIT and NTRK-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251462.1 False 4443 mRNA 0.44 2 3695165 3701245
XM_043251470.1 True 4658 mRNA 0.45 3 3695165 3701245

Neighbor

gene id symbol gene type direction distance location
cep97 NA coding downstream 955576 2732846 ~ 2739589 (-)
nfkbiz LOC107751657,LOC107575617 coding downstream 962807 2726297 ~ 2732358 (-)
eed eed,LOC107751659,LOC107662672 coding downstream 971245 2720655 ~ 2723920 (-)
hikeshi hikeshi,zgc:110091,LOC106574699 coding downstream 975022 2717987 ~ 2720143 (-)
LOC122342272 LOC107751049 coding downstream 977321 2710717 ~ 2717844 (-)
ndfip2 ndfip2,LOC107676059,LOC107549434,LOC107750462,LOC107674006,LOC108411896 coding upstream 830544 4531789 ~ 4546466 (-)
mnx2b mnx2b,LOC107750883,LOC107674001,LOC107556279,LOC107676047 coding upstream 868589 4569834 ~ 4574420 (-)
fn1b fn1b,LOC107749885,LOC107556289,LOC107674002,LOC107750053,LOC107676051,LOC107549419 coding upstream 895835 4597080 ~ 4618627 (-)
nrp2a nrp2a,nrp2,LOC107556288,LOC107749808,LOC107750056,LOC107673990,LOC107676043 coding upstream 972444 4673689 ~ 4739460 (-)
pard3ba pard3ba,LOC107673991,LOC107750057,LOC107676058,LOC107749732,LOC107549438,LOC107556285 coding upstream 1064054 4765299 ~ 4896900 (-)
G732 NA non-coding downstream 351672 3343091 ~ 3343493 (-)
G730 NA non-coding downstream 353212 3341562 ~ 3341953 (-)
G720 NA non-coding downstream 408956 3285956 ~ 3286209 (-)
G695 NA non-coding downstream 574368 3112270 ~ 3120797 (-)
G692 NA non-coding downstream 625096 3066811 ~ 3070069 (-)
G792 NA non-coding upstream 321122 4022367 ~ 4024242 (-)
G794 NA non-coding upstream 323461 4024706 ~ 4026047 (-)
G797 NA non-coding upstream 324860 4026105 ~ 4028108 (-)
G803 NA non-coding upstream 336493 4037738 ~ 4037970 (-)
LOC122346152 NA non-coding upstream 744814 4446059 ~ 4454180 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 410379 3136508 ~ 3284786 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 1005701 2688765 ~ 2689464 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 2090181 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 2463518 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 2946801 738137 ~ 748364 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 306595 4007840 ~ 4014287 (-)
G820 NA other upstream 597065 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 1254874 4956119 ~ 4960210 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 2142899 5844144 ~ 5853249 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 2410218 6111463 ~ 6113523 (-)

Expression


Co-expression Network