LOC122347249


Basic Information

Item Value
gene id LOC122347249
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6487644 ~ 6490193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251203.1
AGTTTGTATCttgcaatttagatttttttttttaattgctagaAAGATGATAAGTTGAATTATAccttctttatatttattccaGAGCAGGAAAAAATGGTTGATGAAagagaaaattagttttctgtgATATTCATCTCAGATGTTCTGCTAACATCTGACAAGCAGAAAGTCACAGAGttgtaattatgtattttttttatcatgttaaatgcttttttgcatggcattttttgcacaaaaagatTGCTTATGCTATTTTTATGCTGTAATAATATACTGGGGTCATCTGGGGCCGGTACCAGCTTCGCATGCTTGCGTAGTTTTCAAATAGTGCCACAGATTGTCAGGACTGAGATCACAGCTTTGAGAAAACCATTGtaacacattcattcattcaaacgtTTTGTTCTTGTTTCGCTCTGATGTTAATTTGGCCGTGTGTTTGTGAAGATTATCATGACAGAAGAGCTGTGACATGGACCTTCTGTTTATAGCAGACTGAAACAGGTCCTTTTGCAGAAGCTATTTATGTTCTGCACCATTCATTCTTCTTTCTGTTTCAGGATGTCCAGATGAAAAACATGATGCAaccaaagccaaacaaaggctCTGCACAATTGCTCAAGTATAGGTCCTATGTGAGTGGAGATAGGAAGATGGAGCGAGTGAATGGGATAAGGACATCATGACCCAGACATCACAAACAGCGCTCGTGAAAACAGCCTTGAAAAGAGCCTCCAGGCTCACGGATCTCTGCcatgagaatgagaaaatgcTTCCTGAAAAGGTTCGTCGGCAGTAAACTTTCATCCAATTAGGGCACAGCGTTGATGTTGGTCTCCCATACATGCCAATGTGAAAATTGCTATTAGTCACAGTCCTAGTTTGTGTGCTTTCTGTGTGATATAATCTCAGCACTCACAGCCCCATCTTTACTCTATTAAATTGAAGTGTTCAAGGGAAACAAAACACTGATGGCGGAGCGCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251203.1 True 992 lncRNA 0.39 3 6487644 6490193

Neighbor

gene id symbol gene type direction distance location
micall2b LOC107564427,LOC107702520,LOC107590718,LOC107722924,LOC107692650,LOC107725362 coding downstream 35002 6439035 ~ 6452642 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding downstream 137143 6339847 ~ 6350501 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding downstream 149325 6333937 ~ 6338319 (-)
LOC122342505 LOC107565181 coding downstream 157117 6329661 ~ 6330527 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding downstream 174871 6299916 ~ 6312773 (-)
LOC122347228 NA coding upstream 55768 6545961 ~ 6547468 (-)
LOC122346971 ugt5b3,ugt5b4,LOC107564400,LOC107692647,LOC107714140 coding upstream 90011 6580204 ~ 6593716 (-)
LOC122346986 ugt5b1,LOC107692647,LOC107714140,LOC107564400 coding upstream 98864 6589057 ~ 6593789 (-)
LOC122346519 mad1l1,LOC107564387,LOC107722950,LOC107590744,LOC107714125 coding upstream 224552 6714745 ~ 6761771 (-)
c1h7orf26 LOC107714132,LOC107722952,LOC107663321,LOC107692723,LOC107565504 coding upstream 275869 6766062 ~ 6770577 (-)
G1398 NA non-coding downstream 74063 6413382 ~ 6413581 (-)
G1394 NA non-coding downstream 98007 6389420 ~ 6389637 (-)
G1288 NA non-coding downstream 269055 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 273097 6213641 ~ 6214547 (-)
G1263 NA non-coding downstream 398241 6089023 ~ 6089403 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 292220 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 312101 6802294 ~ 6802755 (-)
G1528 NA non-coding upstream 363881 6854074 ~ 6854374 (-)
G1529 NA non-coding upstream 365602 6855795 ~ 6856108 (-)
G1531 NA non-coding upstream 367602 6857795 ~ 6858061 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 19390 6456044 ~ 6468254 (-)
gng13a NA other downstream 159303 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 212893 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 261530 6220604 ~ 6226114 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 374121 6111463 ~ 6113523 (-)
LOC122342514 NA other upstream 43308 6533501 ~ 6544558 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 581396 7071589 ~ 7134282 (-)
G1642 NA other upstream 635449 7125642 ~ 7170022 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 713811 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 2001951 8492144 ~ 8500212 (-)

Expression


Co-expression Network