LOC122351434


Basic Information

Item Value
gene id LOC122351434
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2821188 ~ 2833731 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251760.1
ATTTATGACAGCGCGGCATGGCTTCATTTCATCCTGCTCTTTTAATGTGCTGAAAGACACATCGCTCCCCTCAGCATCACATCAGTGCAGAGACGTCGTCGCTTCTGATGCATGCAGCTCTTCCAAAAGTGACTAGATAACAGCAGAATTGTCCAGCAGACGGTGAAGTGTTGCTCGAGGCTGAGCGCCCCACACAACCTGCATTTTACGGCTGGAGAAGATGGAGACTTTCATCGAAACTGACAAGCCGAGGTCCAGACGGATGGCTTTTCTGGAGATATGTGACTCTGCGGAGTCCGACTCAGACGGGGAATAGTTTGAACTATTTATGCGAGAGGCGCTCTCGACGGGAGTCGGACCATGCATGAAATGTTCAGCAATGTCAACAATGCCAAATGTAGGGCAGCCGAGAATTCCCAGCGACAACAAAGGTCCATCCTCCCAGTGCCATCTGCCGCTACCATAAAGAGGAGAGACGGGGCGAGCGAGACGGTGCGTGACAGACTGTTTTATTTGACTTGGAGGGGCTAATTTGGATTAGGGAGGATTTGTGTCCCCGCTGTGAAGCCCGGGCCTGTTTGCGAAGCGACTTGCGGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251760.1 True 600 lncRNA 0.52 3 2821188 2833731

Neighbor

gene id symbol gene type direction distance location
cep97 NA coding downstream 81599 2732846 ~ 2739589 (-)
nfkbiz LOC107751657,LOC107575617 coding downstream 88830 2726297 ~ 2732358 (-)
eed eed,LOC107751659,LOC107662672 coding downstream 97268 2720655 ~ 2723920 (-)
hikeshi hikeshi,zgc:110091,LOC106574699 coding downstream 101045 2717987 ~ 2720143 (-)
LOC122342272 LOC107751049 coding downstream 103344 2710717 ~ 2717844 (-)
LOC122353624 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 coding upstream 861434 3695165 ~ 3701245 (-)
ndfip2 ndfip2,LOC107676059,LOC107549434,LOC107750462,LOC107674006,LOC108411896 coding upstream 1698058 4531789 ~ 4546466 (-)
mnx2b mnx2b,LOC107750883,LOC107674001,LOC107556279,LOC107676047 coding upstream 1736103 4569834 ~ 4574420 (-)
fn1b fn1b,LOC107749885,LOC107556289,LOC107674002,LOC107750053,LOC107676051,LOC107549419 coding upstream 1763349 4597080 ~ 4618627 (-)
nrp2a nrp2a,nrp2,LOC107556288,LOC107749808,LOC107750056,LOC107673990,LOC107676043 coding upstream 1839958 4673689 ~ 4739460 (-)
G681 NA non-coding downstream 78760 2740227 ~ 2742428 (-)
G666 NA non-coding downstream 166356 2652717 ~ 2654832 (-)
G652 creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633 non-coding downstream 256778 2562191 ~ 2564410 (-)
G653 creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464 non-coding downstream 259222 2561355 ~ 2561966 (-)
G638 NA non-coding downstream 262324 2556243 ~ 2558864 (-)
G692 NA non-coding upstream 233080 3066811 ~ 3070069 (-)
G695 NA non-coding upstream 278539 3112270 ~ 3120797 (-)
G720 NA non-coding upstream 452225 3285956 ~ 3286209 (-)
G730 NA non-coding upstream 507831 3341562 ~ 3341953 (-)
G732 NA non-coding upstream 509360 3343091 ~ 3343493 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 131724 2688765 ~ 2689464 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 1216204 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1589541 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 2072824 738137 ~ 748364 (-)
G67 NA other downstream 2385063 435808 ~ 436125 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 302777 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 1174109 4007840 ~ 4014287 (-)
G820 NA other upstream 1464579 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 2122388 4956119 ~ 4960210 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 3010413 5844144 ~ 5853249 (-)

Expression


Co-expression Network