LOC122353666


Basic Information

Item Value
gene id LOC122353666
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 627700 ~ 627818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252043.1
ccttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcttggttagtacttggatgggagactgcctaggaataccaggtgctgtaagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252043.1 True 119 rRNA 0.52 1 627700 627818

Neighbor

gene id symbol gene type direction distance location
trnag-gcc NA coding downstream 188572 439054 ~ 439128 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding downstream 194022 422900 ~ 433678 (-)
ccr9b ccr9b,LOC107598203,LOC107749654,LOC107675310,LOC107726711,LOC107703604 coding downstream 219614 404682 ~ 408086 (-)
gli3 LOC107749627,LOC107747788,LOC107554716,LOC107598194,LOC107694915,LOC107694564 coding downstream 266097 210723 ~ 361603 (-)
prpf4bb prpf4bb,LOC107738454,LOC107749644,LOC107598186,LOC107670278,LOC107554722,LOC108442973 coding downstream 422141 193211 ~ 205559 (-)
LOC122342059 ncam2,LOC107748174,LOC107756756,LOC107673712,LOC108426076,LOC107721821 coding upstream 138408 766226 ~ 826226 (-)
farp1 farp1,LOC107730395,LOC107677850,LOC107653673,LOC107560794,LOC107744955,LOC107559785 coding upstream 422928 1050746 ~ 1116435 (-)
kpnb3 kpnb3,ipo5,LOC107677849,LOC107653674 coding upstream 490023 1117841 ~ 1137065 (-)
LOC122353706 NA coding upstream 501681 1129499 ~ 1129637 (-)
rap2ab rap2ab,rap2a,LOC105911819,LOC106582448,LOC106512668,LOC101166017,LOC105933629,LOC103391592,LOC105907999 coding upstream 520854 1148672 ~ 1164935 (-)
G73 NA non-coding downstream 179060 448328 ~ 448640 (-)
G72 NA non-coding downstream 179818 447508 ~ 447882 (-)
G70 NA non-coding downstream 185491 441879 ~ 442209 (-)
G66 NA non-coding downstream 205291 422132 ~ 422409 (-)
G56 NA non-coding downstream 233848 393299 ~ 393852 (-)
G99 NA non-coding upstream 95927 723745 ~ 724036 (-)
G125 NA non-coding upstream 262426 890244 ~ 890587 (-)
G231 NA non-coding upstream 345928 973746 ~ 973969 (-)
LOC122347488 NA non-coding upstream 628371 1256189 ~ 1263203 (-)
G244 NA non-coding upstream 655020 1282838 ~ 1284809 (-)
G67 NA other downstream 191575 435808 ~ 436125 (-)
G20 NA other downstream 440615 186420 ~ 187085 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other upstream 110319 738137 ~ 748364 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other upstream 448370 1076188 ~ 1231647 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 964251 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 2060947 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 2508690 3136508 ~ 3284786 (-)

Expression


Co-expression Network