LOC122353699


Basic Information

Item Value
gene id LOC122353699
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2742079 ~ 2742212 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252051.1
CTTGCCCCTTGAAGGCGTTGCAGTGTGACTGATTCTGTCATTTCTGTGTCATAAGGTGGCACAGAGTAGAAGGACTGTGTCTACACCTAGTACCCTTAACAATGGATGCTCAGTGTCATTTACAGCCCTACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252051.1 True 134 snoRNA 0.47 1 2742079 2742212

Neighbor

gene id symbol gene type direction distance location
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding upstream 41855 2691742 ~ 2700224 (+)
ildr1a LOC107751054,LOC107570078 coding upstream 51314 2678298 ~ 2690765 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding upstream 66050 2656133 ~ 2676029 (+)
gpa33a NA coding upstream 87231 2647427 ~ 2654848 (+)
cd247 cd247 coding upstream 168102 2564546 ~ 2573977 (+)
LOC122328837 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC103365236 coding downstream 15871 2758083 ~ 2782184 (+)
LOC122350229 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496 coding downstream 199558 2941770 ~ 3120820 (+)
slitrk6 slitrk6,LOC107674010,LOC107558904,LOC107730399,LOC107574216,LOC107737039,LOC107698122 coding downstream 1062387 3804599 ~ 3817996 (+)
LOC122352357 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 1265563 4007775 ~ 4011370 (+)
LOC122342374 erbb4a,LOC107674013,LOC107725343,LOC107556266,LOC108440448,LOC107557316,LOC107707608 coding downstream 1479071 4221283 ~ 4232503 (+)
G546 NA non-coding upstream 11359 2726300 ~ 2730720 (+)
G538 NA non-coding upstream 21156 2703522 ~ 2720923 (+)
G527 NA non-coding upstream 114675 2626045 ~ 2627404 (+)
G486 NA non-coding upstream 136002 2603191 ~ 2606077 (+)
G518 NA non-coding upstream 153071 2588687 ~ 2589008 (+)
G719 NA non-coding downstream 543737 3285949 ~ 3286202 (+)
G771 NA non-coding downstream 978052 3720264 ~ 3720539 (+)
LOC122341420 NA non-coding downstream 1277885 4020097 ~ 4024338 (+)
LOC122346127 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 non-coding downstream 1467197 4209409 ~ 4218600 (+)
LOC122346159 LOC107557315,LOC107705456,LOC107725343,LOC107707608,LOC107674013,LOC107667809,LOC107556266 non-coding downstream 1477030 4219242 ~ 4221288 (+)
G482 dusp27 other upstream 145777 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 183552 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 214835 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 223694 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 252976 2483640 ~ 2489103 (+)
G727 NA other downstream 592446 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 894495 3636707 ~ 3699093 (+)
G824 NA other downstream 1614486 4356698 ~ 4357260 (+)
G826 NA other downstream 1615795 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 2195969 4938181 ~ 4944841 (+)

Expression


Co-expression Network