LOC122353706


Basic Information

Item Value
gene id LOC122353706
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1129499 ~ 1129637 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252053.1
GCCTGGTGGTTTCCTCGAGACAGCTCTTCTGTGCTGATCCGTGGGTTTTATTAAACGGGCACACATCGATCTCTGCGATTTCAATGCTTGGAGGTCGCTGCTCCCGTGCGGCTTCCACAGCCCGGTTGCAGAAACACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252053.1 True 139 snoRNA 0.55 1 1129499 1129637

Neighbor

gene id symbol gene type direction distance location
farp1 farp1,LOC107730395,LOC107677850,LOC107653673,LOC107560794,LOC107744955,LOC107559785 coding downstream 13064 1050746 ~ 1116435 (-)
LOC122342059 ncam2,LOC107748174,LOC107756756,LOC107673712,LOC108426076,LOC107721821 coding downstream 303273 766226 ~ 826226 (-)
LOC122353666 NA coding downstream 501681 627700 ~ 627818 (-)
trnag-gcc NA coding downstream 690371 439054 ~ 439128 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding downstream 695821 422900 ~ 433678 (-)
rap2ab rap2ab,rap2a,LOC105911819,LOC106582448,LOC106512668,LOC101166017,LOC105933629,LOC103391592,LOC105907999 coding upstream 19035 1148672 ~ 1164935 (-)
slc5a3a slc5a3a,LOC107730390,LOC107677845,LOC107555245,LOC107559792,LOC107746980,LOC107653669 coding upstream 135134 1264771 ~ 1269925 (-)
ptgfrnb LOC107730397,LOC107555256,LOC107653676,LOC107559799,LOC107677843,LOC107746979,LOC107717917 coding upstream 147863 1277500 ~ 1315538 (-)
si:ch211-132g1.1 NA coding upstream 189153 1318790 ~ 1324793 (-)
si:ch211-132g1.6 NA coding upstream 202046 1331683 ~ 1333824 (-)
G231 NA non-coding downstream 155530 973746 ~ 973969 (-)
G125 NA non-coding downstream 238912 890244 ~ 890587 (-)
G99 NA non-coding downstream 405463 723745 ~ 724036 (-)
G73 NA non-coding downstream 680859 448328 ~ 448640 (-)
G72 NA non-coding downstream 681617 447508 ~ 447882 (-)
LOC122347488 NA non-coding upstream 126552 1256189 ~ 1263203 (-)
G244 NA non-coding upstream 153201 1282838 ~ 1284809 (-)
G247 NA non-coding upstream 214661 1344298 ~ 1346789 (-)
G260 NA non-coding upstream 311451 1441088 ~ 1441512 (-)
G297 NA non-coding upstream 437401 1567038 ~ 1567532 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 381135 738137 ~ 748364 (-)
G67 NA other downstream 693374 435808 ~ 436125 (-)
G20 NA other downstream 942414 186420 ~ 187085 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 462432 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 1559128 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 2006871 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 2878203 4007840 ~ 4014287 (-)
G820 NA other upstream 3168673 4298310 ~ 4299193 (-)

Expression


Co-expression Network