G74755


Basic Information

Item Value
gene id G74755
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 4130565 ~ 4131444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU110601
TAAACCCGTGTCTTccaatcatttaatattttatttcaaatgcatgaTTTGTATGCTTACAGTTTCACTGATGTGATCAGAACAGACATTCCTACAAACACAAACCTCGTCGCACATAAATAGATCTTAAAATGCGTATGCTAAATGACCTAAGGTGCaagataaaagtattttatgacCTTATAATACAAGCCAAGGCTAACGAAGTTTTTAGGAAAGAAAGGGAAGTTGCACTGAAGCGTCGCAGGGTGAGCGTCACTGGATATCTTGTAACGTGATCTACGTCTTACCCGCTTAAACACAACTATGGTGACTTGTCTGTCATGTAATCTAATATGGCTGCCACAAGTTCAAAGACGGGCACGGGCAAAAGGAGTAACAGTAACCGGCCCACTTCCAGTTTGAAAAATAAGCATAGAAAGGCAACATTTATTCAGGCAAGAGTCATCCTGGAGGACAGGATGTAGTTGAAATGGCTGTGGATTTTAGTAGGTTTTTTTCTCCTCGAATATCAGGTTGGCAGTGGCTTTTTTGGCCTTCATCTTTAAACTTGTCTGCCGCCTCTGACGCTTTATCCGTGATGTCTTTCATCACATTGTCGATCTTGGCTTCGTTCTTTAGGAAGAAGGGCCGGATGATTCTCGTGTAGATCAGAACGGAGCCGTTTGATGGAGTGGGAGCCATGCACCAAACCAAGAAAgcgc
>TU110602
TAAACCCGTGTCTTccaatcatttaatattttatttcaaatgcatgaTTTGTATGCTTACAGTTTCACTGATGTGATCAGAACAGACATTCCTACAAACACAAACCTCGTCGCACATAAATAGATCTTAAAATGCGTATGCTAAATGACCTAAGGTGCaagataaaagtattttatgacCTTATAATACAAGCCAAGGCTAACGAAGTTTTTAGGAAAGAAAGGGAAGTTGCACTGAAGCGTCGCAGGGTGAGCGTCACTGGATATCTTGTAACGTGATCTACGTCTTACCCGCTTAAACACAACTATGGTGACTTGTCTGTCATGTAATCTAATATGGCTGCCACAAGTTCAAAGACGGGCACGGGCAAAAGGAGTAACAGTAACCGGCCCACTTCCAGTTTGAAAAATAAGCATAGAAAGGCAACATTTATTCAGGCAAGAGTCATCCTGGAGGACAGGATGTAGTTGAAATGGCTGTGGATTTTAGTAGGTTTTTTTCTCCTCGAATATCAGGTTGGCAGTGGCTTTTTTGCTTCATCTTTAAACTTGTCTGCCGCCTCTGACGCTTTATCCGTGATGTCTTTCATCACATTGTCGATCTTGGCTTCGTTCTTTAGGAAGAAGGGCCGGATGATTCTCGTGTAGATCAGAACGGAGCCGTTTGATGGAGTGGGAGCCATGCACCAAACCAAGAAAgcgc

Function

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0071345 cellular response to cytokine stimulus biological_process
GO:0034097 response to cytokine biological_process
GO:0017119 Golgi transport complex cellular_component
GO:0099023 vesicle tethering complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110601 True 704 lncRNA 0.42 2 4130565 4131444
TU110602 False 702 lncRNA 0.42 2 4130565 4131444

Neighbor

gene id symbol gene type direction distance location
dcp2 dcp2,LOC107702577,LOC107670035,LOC107564107 coding downstream 4033 4119378 ~ 4126532 (-)
ca9 LOC107568649,LOC107715873,LOC107670029,LOC107737123,LOC107572190,LOC107702555 coding downstream 14789 4106008 ~ 4115776 (-)
pdzph1 LOC107702580,LOC107670049,LOC107560411,LOC107558250,LOC107715841,LOC107706919,LOC107737152,LOC107579090 coding downstream 226442 3891642 ~ 3904123 (-)
pam pam,LOC107737006,LOC107670040,LOC107560403,LOC107715844,LOC107702561 coding downstream 251045 3843692 ~ 3879520 (-)
sec31a LOC107715884,LOC107702588 coding downstream 466684 3644069 ~ 3663881 (-)
chd1 chd1,LOC107665465,LOC107670034 coding upstream 298 4131742 ~ 4153288 (-)
macir zgc:194281,cunh5orf30,LOC107665462,LOC107740794,LOC107715868,LOC107670048,LOC107564120 coding upstream 23960 4155404 ~ 4164114 (-)
ppip5k2 ppip5k2 coding upstream 35578 4167022 ~ 4201388 (-)
sh2d4a sh2d4a,LOC107715862,LOC107665475,LOC107740790,LOC107564121 coding upstream 109857 4241301 ~ 4249943 (-)
nrg1 nrg1,LOC107575152,LOC107681480 coding upstream 227216 4358660 ~ 4407937 (-)
G74757 NA non-coding downstream 554 4126895 ~ 4130011 (-)
G74737 NA non-coding downstream 121191 4007230 ~ 4009374 (-)
G74742 NA non-coding downstream 130778 3997901 ~ 3999787 (-)
G74739 map3k1,LOC107670047,LOC107737160,LOC107702559,LOC107715839,LOC107558252 non-coding downstream 137131 3992187 ~ 3993434 (-)
G74615 NA non-coding downstream 298473 3831602 ~ 3832092 (-)
G74791 NA non-coding upstream 167292 4298736 ~ 4323950 (-)
G74796 NA non-coding upstream 231960 4363404 ~ 4364758 (-)
G74762 tln1,LOC107702558,LOC107715875,LOC107568645 non-coding upstream 363616 4495060 ~ 4496658 (-)
G74803 LOC107715875,LOC107737170,LOC107568645,LOC107670039,LOC107702558 non-coding upstream 379102 4510546 ~ 4510942 (-)
G74819 NA non-coding upstream 548259 4679703 ~ 4680232 (-)
LOC122352741 diras2,LOC107560410,LOC107736992,LOC107702570,LOC107558266,LOC107715878,LOC107670053 other downstream 217823 3905614 ~ 3912742 (-)
hnrnpd LOC107702593,LOC107715890,LOC107573849 other downstream 522777 3601612 ~ 3607788 (-)
LOC122353137 palm2,LOC107702598,LOC107715893,LOC107732273,LOC107653494,LOC107569382 other downstream 752781 3337339 ~ 3377784 (-)
LOC122352587 cntfr,LOC107554853,LOC107756542 other downstream 1363370 2717097 ~ 2767195 (-)
LOC122352692 NA other downstream 1933136 2194085 ~ 2197429 (-)
LOC122352369 colgalt1,LOC107672476,LOC107711180,LOC107757371,LOC107670492,LOC107567242,LOC108429625,LOC107587993 other upstream 887863 5019307 ~ 5028513 (-)
si:ch211-113d22.2 si:ch211-113d22.2,LOC107677989,LOC107705073,LOC107586211,LOC107688532 other upstream 2406678 6538122 ~ 6540973 (-)
sprn2 LOC107578968,LOC107720715 other upstream 2496981 6628425 ~ 6631188 (-)
G75454 LOC107552069,LOC107678002,LOC107586137,LOC107687386,LOC107742371,LOC108437806 other upstream 3045880 7177324 ~ 7180821 (-)
LOC122352929 LOC107675999,LOC107677996,LOC107552059,LOC107720693 other upstream 3392750 7524194 ~ 7528558 (-)

Expression


Co-expression Network