G78373


Basic Information

Item Value
gene id G78373
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1203876 ~ 1204107 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115978
GAAGGCCTGAATATATGATGGCTCAGCTTTCTCCAGAACGCTccttaataaatgaaatgataagCACAGCATTTGTAAATAAGACGGCGGCGCAGTTGTCTCGTAGTAAACGCTTCGGTGAGTTGTCGTCGCAGGAACATTGTTGCTTTTGGCTTTCGATTTATGCAGTAACTTGCGTTCTTATTTTCCTTGTGAGAGCAGGAGCAGACTGTAATCAACAGTTCTGTCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115978 True 232 lncRNA 0.43 1 1203876 1204107

Neighbor

gene id symbol gene type direction distance location
trnac-gca_119 NA coding downstream 39535 1164270 ~ 1164341 (-)
trnac-gca_118 NA coding downstream 40222 1163583 ~ 1163654 (-)
trnac-gca_117 NA coding downstream 40442 1163363 ~ 1163434 (-)
trnac-gca_116 NA coding downstream 40871 1162934 ~ 1163005 (-)
trnac-gca_115 NA coding downstream 41760 1162045 ~ 1162116 (-)
pdrg1 pdrg1,LOC107730611,LOC107722004,LOC107670939,LOC107654798,LOC107580937,LOC107654789 coding upstream 1012 1205119 ~ 1206837 (-)
fam217bb NA coding upstream 4093 1208200 ~ 1211684 (-)
si:ch73-303b9.1 LOC107654802,LOC107747473,LOC107550334 coding upstream 72260 1276367 ~ 1277356 (-)
faim2b faim2b,LOC107730619,LOC107681489,LOC107565004,LOC107741574,LOC107551329 coding upstream 245502 1449609 ~ 1455138 (-)
nr1d4b nr1d4b,LOC107681485,LOC107730617,LOC107551331,LOC107654804,LOC107565003 coding upstream 255467 1459574 ~ 1471248 (-)
G78354 NA non-coding downstream 35062 1168322 ~ 1168814 (-)
G78339 cnbp,cnbpb,LOC107742030,LOC107742027,LOC107675970,LOC106583855 non-coding downstream 44999 1075785 ~ 1158877 (-)
G78338 NA non-coding downstream 129420 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 151332 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 153940 1049406 ~ 1049936 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 8169 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 77625 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 83186 1287293 ~ 1298959 (-)
G78419 NA non-coding upstream 88854 1292961 ~ 1296158 (-)
G78440 LOC106565466,LOC107082107 non-coding upstream 185683 1389790 ~ 1391106 (-)
LOC122353728 NA other downstream 229089 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 409740 599107 ~ 794136 (-)
G78170 NA other downstream 747878 453134 ~ 455998 (-)
G78144 alas1 other downstream 754975 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 798465 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 13112 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 384597 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 500517 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1609245 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1615481 2819588 ~ 2830203 (-)

Expression


Co-expression Network