trnac-gca_16


Basic Information

Item Value
gene id trnac-gca_16
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1110035 ~ 1110106 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1486
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcagatccgggtgccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1486 True 72 tRNA 0.58 1 1110035 1110106

Neighbor

gene id symbol gene type direction distance location
trnac-gca_15 NA coding downstream 150 1109814 ~ 1109885 (-)
trnac-gca_14 NA coding downstream 360 1109604 ~ 1109675 (-)
trnac-gca_13 NA coding downstream 793 1109172 ~ 1109242 (-)
trnac-gca_12 NA coding downstream 1011 1108953 ~ 1109024 (-)
trnac-gca_11 NA coding downstream 1223 1108741 ~ 1108812 (-)
trnac-gca_17 NA coding upstream 147 1110253 ~ 1110324 (-)
trnac-gca_18 NA coding upstream 357 1110463 ~ 1110534 (-)
trnac-gca_19 NA coding upstream 567 1110673 ~ 1110743 (-)
trnac-gca_20 NA coding upstream 788 1110894 ~ 1110965 (-)
trnas-gcu_14 NA coding upstream 1000 1111106 ~ 1111177 (-)
G78338 NA non-coding downstream 35579 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 57491 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 60099 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 86225 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 202461 905807 ~ 907574 (-)
G78354 NA non-coding upstream 58216 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 93770 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 102170 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 171626 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 177187 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 135248 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 315899 599107 ~ 794136 (-)
G78170 NA other downstream 654037 453134 ~ 455998 (-)
G78144 alas1 other downstream 661134 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 704624 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 107113 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 478598 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 594518 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1703246 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1709482 2819588 ~ 2830203 (-)

Expression


Co-expression Network