trnac-gca_23


Basic Information

Item Value
gene id trnac-gca_23
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1112180 ~ 1112251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1494
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccgattcaaatccgggtgcccctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1494 True 72 tRNA 0.54 1 1112180 1112251

Neighbor

gene id symbol gene type direction distance location
trnac-gca_22 NA coding downstream 368 1111741 ~ 1111812 (-)
trnac-gca_21 NA coding downstream 580 1111529 ~ 1111600 (-)
trnas-gcu_14 NA coding downstream 1003 1111106 ~ 1111177 (-)
trnac-gca_20 NA coding downstream 1215 1110894 ~ 1110965 (-)
trnac-gca_19 NA coding downstream 1437 1110673 ~ 1110743 (-)
trnac-gca_24 NA coding upstream 152 1112403 ~ 1112474 (-)
trnac-gca_25 NA coding upstream 370 1112621 ~ 1112692 (-)
trnac-gca_26 NA coding upstream 577 1112828 ~ 1112899 (-)
trnac-gca_27 NA coding upstream 790 1113041 ~ 1113111 (-)
trnac-gca_28 NA coding upstream 1003 1113254 ~ 1113325 (-)
G78338 NA non-coding downstream 37724 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 59636 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 62244 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 88370 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 204606 905807 ~ 907574 (-)
G78354 NA non-coding upstream 56071 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 91625 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 100025 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 169481 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 175042 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 137393 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 318044 599107 ~ 794136 (-)
G78170 NA other downstream 656182 453134 ~ 455998 (-)
G78144 alas1 other downstream 663279 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 706769 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 104968 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 476453 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 592373 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1701101 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1707337 2819588 ~ 2830203 (-)

Expression


Co-expression Network