bhlha15 (bhlha15,LOC107669184,LOC107753453,LOC107584229,LOC107594213,LOC107699868)


Basic Information

Item Value
gene id bhlha15
gene name bhlha15,LOC107669184,LOC107753453,LOC107584229,LOC107594213,LOC107699868
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7851508 ~ 7854838 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254098.1
AGCTCACGGGTGAGTCGAGACGAAACGGATCCCTCCTTTGATTGGCCACAAAAGCGCTACGTGGACATCGAGCAGCAACAGGTAGAGCGCGTGACCGTTATCATTTCATTCTGACTGCGGCTGGCAGGAGGACAACAGCGCTTCGCGTCAACCCATTATCGCTCTCCTCAAGCCTCTTATCGCGCTCAAATCGCCACGAGTTTGGCGGACATTTATTTCGAGGGCCTACACCAGGGTGTGGGTGAGCCAAGTATGAAGTCCAAAGGAAAGGGGTCAAAGCGGGGCAGACAGTCTTGGGCAGAGCAGGACGACCCAGACTTTACGCTGGAAACAGAGCCAGGTTCCAGTGAGCAGGAGGGTTCAGAGGCGTCCGTGAGGCTGGGAGGCACATGGAGAACACTGAGGGGTGAGAGGCACAGCAGTTCCCGCGTGGCCAAACGTCGCAGGCGGCAGCACGGCAGCGCTAAGGAACGCAACGTCCGCAGGCTGGAGAGtaacgagagagagaggcagaggatGCACAAACTCAACAATGCCTTTCAGGCCCTGCGGGAGGCCATTCCTCACGTCAACACGGACAAGAAACTTTCCAAGATCGAGACGCTCACGCTGGCAAAGAACTACATCAAGGCATTAACCACAATCATCCTGGGCATGTCAAACGCCTGCCTGCCTCACGCCGAGACTGACATGGAGGCTCATGCCTCCCGGCTCCTGCAGTGCTATCAGCAGCATCTACaggaggagggagaggaagaTCTGTCCAACTACCTGAGCCACATTCACAGCTTCAACCAAGGCAGCTAACGCACGCTGCCACAGACTCAAATAGTGCTGTGTAAATACACGCGTGATGATGAACTCACAAAAGGGTCCATCTGAATGACCCCGAGTTTACAAGCTAAAGCTGGTTCATAAACGGGCTCATTTACGTACAGAGTATGCACCGATTATTTTGCCCACAAACAATGAGGTAGTTATTTTCCAACATCAGTCTTTCTTAGAGTTACTAGCAGTGAACTCTTTGGATTATGAAGGGACACAATTTTCTGGCCAATAgtgtagttcacccaaaaaacgtCACAAAAGAATATGTTTTGCTCAAATAGTGACAGTCAGTGGACCCTTTATTGTGTgggcaaacaaaacaaaatcttctttctttgttttccatacagtcatacaggtttgaaacgtcctgagggtgagcaaacaataaaaataaattttttttgggtgaaccatccctttaacaGGGTaagtatttcatattaaaaatgcaaagtttcGGAgcagatttaatatttattgagaGGACACATACCATGCACATGTGACACTGAGAGGAGTTCAATGTACTCAAATTAAGACTCTTTACCCTGTTATTTgtctatatttaataatttcaaactatattatcctttttttttctattggtTTCTCTCATGCCTTCATAATATGTACAGAAGCAACCATAAATAATGCCCTATAGGACGTCACACAATTAATCCAGTttcacatataatataataaattacccATAAATATTCCAAATTTATACATCCACATGTACAATATAACTTAGCAGAAGAGGAATAAAACCATTTGGAAAGATCTGTTATAAACACTGTTACTTTTTGAAATTTGTGCTGCCTTTAAATGGAATTAAACCActtatatatctataaatgaaatatgctgACATCCTGAGAAATGTTTCACAACATTGtcattttcatcacattttcaagtgcaaaataaacattgcacTCTTTCATCAATGACAACAGCAAATTAAGTGTCTGAAcgtacactaccattcaaaacttaaaggtCGGTAAGAttcacatgtatttatttatttttttaatctcaccactgcttttatttgataaaataaatattgtgaaaattctgtcatattcATTCAGctatgctgatttttttttttgcactttgcgGATATATAACaaattcttattatcaatgttgaaaacggtaaagctgttaaattattttgtagcaactttttaaacattaaacctTTGAACATTATGTAGGAAGttcaaaagtacagcatttatttttgaaacagaaatctttcaCAATATAATCCTTCACTctcattttagtctttttttatatctttgcTGAATGAAGtatgaatttcttaaaaaaaacaaaataatcataaaaaaatcttactgaccccagatTTTGGAACTGTAGTGTATTTGTACAGTACCACTGTGCCGTCTCCgctttgaataaatacataacccGATACAAGCAGATGATGAAAGTATTAAAGACTTTTATGCTTAAACCGATGTCTAGCGGCATTGCAGCCTAGCCGTAAAATTCCCCGAAGCaggtgtttgtttaaaaatgttgtttgtgtgtgatgttcaatataaaatgctttaagTGTACCTACATTAGCTTACACTGTGaccttttgtatttaatgcccctgaattcaaataaaaaaaaaaaaaatgcaaa

Function

symbol description
bhlha15 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within exocrine pancreas development. Predicted to be active in nucleus. Is expressed in exocrine pancreas; hatching gland; hindbrain; and polster. Orthologous to human BHLHA15 (basic helix-loop-helix family member a15).

NR:

description
serine/threonine-protein kinase LMTK2-like isoform X1

GO:

id name namespace
GO:0031017 exocrine pancreas development biological_process
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K08040 BHLHB8, MIST1; class B basic helix-loop-helix protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254098.1 True 2505 mRNA 0.40 2 7851508 7854838

Neighbor

gene id symbol gene type direction distance location
rsph10b LOC107669165,LOC107584188,LOC107753448 coding upstream 43898 7802834 ~ 7807610 (+)
pms2 pms2,LOC107753423,LOC107594169,LOC107724702 coding upstream 49209 7796260 ~ 7802299 (+)
cyth3a cyth3a,cyth3,LOC107753449,LOC107669236,LOC107584132,LOC108437157,LOC108258062,LOC107556600 coding upstream 73953 7762989 ~ 7777555 (+)
atad1b atad1,atad1b,LOC107680273,LOC107669218 coding upstream 103722 7742835 ~ 7747786 (+)
rnls rnls,LOC107669231,LOC107584138,LOC107680274,LOC107594162 coding upstream 154779 7663106 ~ 7696729 (+)
tmem130 tmem130,LOC107669166 coding downstream 31849 7886687 ~ 7890487 (+)
LOC122355373 trrap,LOC107669193,LOC107699870,LOC107734152 coding downstream 47276 7902114 ~ 7971554 (+)
fam20cb fam20c,fam20cb,LOC107669229,LOC107734234,LOC107699871,LOC105888715,LOC107731385 coding downstream 154542 8009380 ~ 8046039 (+)
foxl3 si:dkey-7e14.3,LOC107731394,LOC107594215,LOC107669190,LOC107734180,LOC107584227,LOC108431962 coding downstream 194738 8049576 ~ 8052386 (+)
noxo1b LOC107669189,LOC107734176,LOC107584122,LOC107699855,LOC107731427,LOC107594217 coding downstream 227796 8082634 ~ 8085604 (+)
G86374 NA non-coding upstream 4646 7846558 ~ 7846862 (+)
G86268 NA non-coding upstream 127647 7720392 ~ 7723861 (+)
G86283 NA non-coding upstream 132225 7718984 ~ 7719283 (+)
G86275 NA non-coding upstream 149709 7701343 ~ 7701799 (+)
G86219 NA non-coding upstream 347009 7502578 ~ 7504499 (+)
G86460 NA non-coding downstream 202093 8056931 ~ 8060176 (+)
G86540 NA non-coding downstream 343256 8198094 ~ 8198410 (+)
G86536 NA non-coding downstream 348745 8203583 ~ 8204143 (+)
LOC122355856 NA non-coding downstream 349307 8204145 ~ 8206748 (+)
G86577 NA non-coding downstream 437005 8291843 ~ 8292062 (+)
LOC122355675 NA other upstream 7425 7815823 ~ 7844083 (+)
G86143 NA other upstream 543279 7307924 ~ 7308229 (+)
G86142 NA other upstream 546660 7303138 ~ 7304848 (+)
G86029 NA other upstream 1328937 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 1409982 6440821 ~ 6441526 (+)
msrb1b msrb1b,LOC100705913 other downstream 250310 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 341126 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 981610 8836448 ~ 8852449 (+)
pkd1b LOC107723630,LOC107665861,LOC107556563 other downstream 1430825 9285663 ~ 9306831 (+)
mfsd8 mfsd8,LOC107738985,LOC107556570 other downstream 1801831 9656669 ~ 9664139 (+)

Expression


Co-expression Network