LOC122356235 (LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922)


Basic Information

Item Value
gene id LOC122356235
gene name LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14079532 ~ 14082790 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138946
GGGATTGTGGGTTTACATGGCGGCGCCCGTTTGAGTCATGTTGAATAATGTCCTACCGACCTTATTCTCACTAATATGAAATAGTAGAATGACATGCATACACGAAACATGTGGAATCTAGTTCGCAAACTCCAAAGTAACAGGACATTGAAATATGGGATCCCGATGCTGCTGCTGGTTGTCGGAGGGTCGTTTGGATTGAGAGAGTTCACTCAGATTAGATATGATGCACAGCGGATAAAAAAGAAGcTGGACCCTGCTCTGGAAGCCCGGGTGAACACTAAAAACCAGTCGACCATCCTTCACGATGAGTATGAGAAATTAAAGGATTTGGACTTGGATGGATGGAAGAACATTCGTGGCCCACGTCCCTGGGAGGATTCGAAGGAGCACCAGGAGCAGCAGAGAGCTCAGCTCAGTAAAAACACATAGAACTCTAAAATCTTAAACTCCCCCTGCTGGCCCACACATGAAAGACACCCTTAAAAACAGTGCAGTGGACCATAAATTGGCATGATCATCATATTATATCTAGATCGGGAACTACCAGTTTTGACTGTACTGTGTCGTCCTTTTTGGAAATATATGTCCTTTTGCACTTGTGTGACTGGGTATGCGTGTATCTGCCCACTTTggtgctcatttatttttatggcatCAGGAAGGTTGTAACCATTTTTCCGTGTCAGTTCACATTGACAGTAATGCAAAACTCAAGCTCCAGTACTGCATctgagtgaaaaaaaacaattgttctTTCAGTGGTGCGAACAGAATCAATGGTGCCTGTGCACATGGTGGGTGAATGGTACAGTCTAAATGAGTGACCTTCTGCACACCTGTGCTGGATCAGCCTACTGCTCACTGTACATCTAATTCCAGGCAGAATATGGTCATCAGCAGTTTGGACATTTGTCTTTTCTGAAACAACCGCTTTCTTGATGAGTTTATTTAGGCTGTTGATGTCTAGCAGTGTCTCTCTGGGTTCCTGAGTGAGTGAAAagctaacattttaattaaaaatataagacaaaattaatcaaaacaatCTGAAACTGTCATTATAGCTTGAAATCAATAGAATAGATTCtttgtgttaatattaataatattaattgtattgCTTTTCAGGACAATGGTATAATACAAAACTATAACAACaactaataatgttttttatgtcttaatttttgcaattagattttaaaacaattacttGCATGCCATGTGCACCATTACCCAACATCAGAGAGCTATGAACATGAGAGTGTCTCTAGTGTTACCTCTTGATGTTTCTAGTTTCTTTTCACAATTTGCAAGAAAAGTCGTCCAAGTGacacttttaatttttacagtatttgttcATATTCATATCTATTACTTTAGAGATTAAAGAGATATTTTACACTGTCCAATAAACCAAGGACTGTTTTAG
>XM_043254765.1
GACGCAATACCAGGTTGTACGAAGTCGTGGAGGGGATTGTGGGTTTACATGGCGGCGCCCGTTTGAGTCATGTTGAATAATGTCCTACCGACCTTATTCTCACTAATATGAAATAGTAGAATGACATGCATACACGAAACATGTGGAATCTAGTTCGCAAACTCCAAAGTAACAGGACATTGAAATATGGGATCCCGATGCTGCTGCTGGTTGTCGGAGGGTCGTTTGGATTGAGAGAGTTCACTCAGATTAGATATGATGCACAGCGGATAAAAAAGAAGcTGGACCCTGCTCTGGAAGCCCGGGTGAACACTAAAAACCAGTCGACCATCCTTCACGATGAGTATGAGAAATTAAAGGATTTGGACTTGGATGGATGGAAGAACATTCGTGGCCCACGTCCCTGGGAGGATTCGAAGGAGCACCAGGAGCAGCAGAGAGCTCAGCTCAGTAAAAACACATAGAACTCTAAAATCTTAAACTCCCCCTGCTGGCCCACACATGAAAGACACCCTTAAAAACAGTGCAGTGGACCATAAATTGGCATGATCATCATATTATATCTAGATCGGGAACTACCAGTTTTGACTGTACTGTGTCGTCCTTTTTGGAAATATATGTCCTTTTGCACTTGTGTGACTGGGTATGCGTGTATCTGCCCACTTTggtgctcatttatttttatggcatCAGGAAGGTTGTAACCATTTTTCCGTGTCAGTTCACATTGACAGTAATGCAAAACTCAAGCTCCAGTACTGCATctgagtgaaaaaaaacaattgttctTTCAGTGGTGCGAACAGAATCAATGGTGCCTGTGCACATGGTGGGTGAATGGTACAGTCTAAATGAGTGACCTTCTGCACACCTGTGCTGGATCAGCCTACTGCTCACTGTACATCTAATTCCAGGCAGAATATGGTCATCAGCAGTTTGGACATTTGTCTTTTCTGAAACAACCGCTTTCTTGATGAGTTTATTTAGGCTGTTGATGTCTAGCAGTGTCTCTCTGGGTTCCTGAGTGAGTGAAAagctaacattttaattaaaaatataagacaaaattaatcaaaacaatCTGAAACTGTCATTATAGCTTGAAATCAATAGAATAGATTCtttgtgttaatattaataatattaattgtattgCTTTTCAGGACAATGGTATAATACAAAACTATAACAACaa

Function

NR:

description
PREDICTED: cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like

GO:

id name namespace
GO:0031966 mitochondrial membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138946 True 1435 TUCP 0.39 4 14079532 14082758
XM_043254765.1 False 1195 mRNA 0.41 4 14079804 14082790

Neighbor

gene id symbol gene type direction distance location
slc8a3 slc8a3,LOC107654959,LOC107705428,LOC107602954,LOC107739881 coding downstream 9388 14031356 ~ 14070144 (-)
map3k9 map3k9,LOC107705427,LOC107654958,LOC107602953,LOC107553203 coding downstream 49015 14017021 ~ 14030517 (-)
med6 med6,LOC107654960,LOC107602956,LOC107683373,LOC107553190 coding downstream 69947 14006738 ~ 14009585 (-)
pcnx1 pcnx1,pcnx,LOC107683773 coding downstream 73754 13978092 ~ 14005778 (-)
lgmn lgmn,LOC107705425,LOC107602950,LOC107654963,LOC107682791,LOC107739877,LOC107553201 coding downstream 102419 13970422 ~ 13977113 (-)
actn1 actn1,LOC107705429,LOC107602958,LOC107654957,LOC107739883,LOC107680897,LOC103359947,LOC108440922 coding upstream 693 14083483 ~ 14108341 (-)
dcaf5 dcaf5,LOC107705431,LOC107654956,LOC107681972,LOC107553205,LOC107739884,LOC102780996 coding upstream 30596 14113386 ~ 14127085 (-)
pacs2 pacs2,LOC107654955,LOC107681285 coding upstream 46604 14129394 ~ 14159166 (-)
LOC122356233 LOC107705434,LOC794838,LOC107553207,LOC107683381,LOC107654921,LOC107602927 coding upstream 81944 14164734 ~ 14171855 (-)
LOC122356234 synj2bp,LOC107705435,LOC107654920,LOC107736856,LOC107553210,LOC107580248 coding upstream 89847 14172637 ~ 14176874 (-)
G93879 NA non-coding downstream 149238 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 390906 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 413272 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 415621 13661750 ~ 13663911 (-)
G93583 NA non-coding downstream 424183 13654379 ~ 13655349 (-)
G93905 NA non-coding upstream 104749 14187539 ~ 14189904 (-)
G94003 NA non-coding upstream 789642 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 898206 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 1196617 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 1521897 15604687 ~ 15605713 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 167695 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 174830 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 361218 13693026 ~ 13718314 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other downstream 511507 13564422 ~ 13568025 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other downstream 520698 13520413 ~ 13558834 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other upstream 77533 14160323 ~ 14164414 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 942042 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 1144542 15227332 ~ 15253357 (-)
G94128 NA other upstream 1481827 15564617 ~ 15583917 (-)
G94147 NA other upstream 1559241 15642031 ~ 15642503 (-)

Expression


Co-expression Network