ptpn2a (LOC107748621,LOC107656702,LOC107686952)


Basic Information

Item Value
gene id ptpn2a
gene name LOC107748621,LOC107656702,LOC107686952
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9112262 ~ 9118118 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260311.1
GTTTGTCTCTATCCACTGGCACACGGAAGTAGCCGATGGGGGTGCTGAAAGTGCTGGTAATTTTATCCTCTTTGATGAGGGTTAACATCGCACCGCACCGTTCCTTGCCGTTTTAACGGGATCATGACCATTTTTAACAATGGAATAGTGACCCCTCGTTTGACCTCAGACGATATATGATTTAACCATTTCACATTTGAATAACCCCgcttcggaaaaaaaaaatggatcagGAGTTTGAGAACATCGATTCATCTGGACAGTGGCAAAACCTTTATAATGAAATCCGTAACCAGTCTCAGGAGTGTCCCTACAAAGTGGCAAAGTTCCCAGAAAATCGCAATAGGAATAGATATAGAGACGTCAGTCCCTATGATCACAGTCGGGTGAGATTAGAAAATTCAGAGAATGACTACATAAATGCGAGCCTAATTACCATGGAGGAGGCCCAGAGAAGGTACATATTGACACAGGGCCCACTGAGGAACACCTGTGGTCACTTCTGGCAAATGATTTGGGAACAGCGTTGCAAAGCAGTCATTATGCTTAACAGAGTTATAGAAAAAGGCTCGGAGAAGTGTGCGCAGTACTGGCCATCAAAGGAGGAGCGAGACATGGATTTCAGTGACACTGGGTTTGTGGTCACTCTGGTGTCTGAGGATGTCAAACCCAATTACATAATCAGACTATTAGAACTCGCAAATGTCAAGaccGGAGAAACCAGAGACATCTACCATTTTAATTACACAACGTGGCCTGATTTTGGCGTGCCGGAGTCCCCGGCATCATTCCTCAACTTCCTTTTCAAGGTTCGAGAGTCTGGTTCTTTGGGGCCAGAGAACGGACCTGCGGTGGTCCACTGCAGTGCAGGAATAGGGAGATCTGGGACGTTCTCATTGGTTGACACCTGCCTTGTATTGATGGACAGGAGGAAAGACCCTTCGTCTGTGGACATTCAAAAGGTTTTGTTAGATATGAGAGAGTATCGCATGGGCCTTATCCAAACCCCAGATCAGCTTCGATTTTCATATATGGCAGTCATGGAGGGAGCAAAGAGCATCCTGGGAGATTCAGCTCTACAGAAGCAGCAGCCTGAAGATTGGCAGGAACCAGAAGCTTATTTGGTTTCATCTTCTCAGAGCTCCATCCTGAGTTCAGAGAAACTCAACGGACAGTCTGACTCTTGTACTGAGACACATGATCCAGGAAGAGAACGAGACAGCATACATTCACCAAATGAAGAGCAAACAGAGTTAAAAACATTAAGCCTTCGCAAGCGGAACCGCGAGGAACGGATAGCCAGCACGGCACAGAAGCTGCAGCAAATGAAGTTGAAACTAAGCGATtcggagaaaaagaaagagaagtggCTTTTCTGGAAACCAATTCTCTTAAATGTTGGCGCTGGTGCAGCTGTAGCACTGGGACTGTGCATGTGCTGGGCCTTTTTGTCCCAGTAATGCCGTTTTATCCCACAGATTCCTCTTCTTGTCTTTTATTCTCCCAGGGACCCAAATTATGGTACTCATATTAGTAGGTGCTTGGATGTTTCTAGATAAGggacaaaaaaatgtagaacGATCGTGTTTACAAGCATTCATACCCGGATGTTGTTCATGATTCATTGAATGTTTGTGTCATATGTTGTTATTACAGTGTAACGAATGATGTAGTTACGTTGTAACTACTATTGTAATTCCATCATGGTAAGTTCTCGCGGCCTAACAACTTTCACTGTACAGTATTTTGTCTGAGTTTATATGCGGAGCAATGTTAAACAGACCCTTACCGGTCTGTCTGAGTCAGTTTATTAAATGCGTCTGTTTGCTAAATTTCCACATGGATATTCATAGGGTGACTCATTTGTTTCAGTAGGTCAATGCCCGGTGAGTTTCCGTACATGCACATCTCAGGATCTTCTAGTAATAAACTGACTGTAGATTCAGCCAAATGTAATAAGTGGTCCGATTTCCactttcaaaaatgtacataGTAAACTCTTTACTAAAGAAGAaatattgcca
>XM_043260313.1
ATGATCACAGTCGGGTGAGATTAGAAAATTCAGAGAATGACTACATAAATGCGAGCCTAATTACCATGGAGGAGGCCCAGAGAAGGTACATATTGACACAGGTATGGCAGTAATGGAAAAAGGCCCACTGAGGAACACCTGTGGTCACTTCTGGCAAATGATTTGGGAACAGCGTTGCAAAGCAGTCATTATGCTTAACAGAGTTATAGAAAAAGGCTCGGAGAAGTGTGCGCAGTACTGGCCATCAAAGGAGGAGCGAGACATGGATTTCAGTGACACTGGGTTTGTGGTCACTCTGGTGTCTGAGGATGTCAAACCCAATTACATAATCAGACTATTAGAACTCGCAAATGTCAAGaccGGAGAAACCAGAGACATCTACCATTTTAATTACACAACGTGGCCTGATTTTGGCGTGCCGGAGTCCCCGGCATCATTCCTCAACTTCCTTTTCAAGGTTCGAGAGTCTGGTTCTTTGGGGCCAGAGAACGGACCTGCGGTGGTCCACTGCAGTGCAGGAATAGGGAGATCTGGGACGTTCTCATTGGTTGACACCTGCCTTGTATTGATGGACAGGAGGAAAGACCCTTCGTCTGTGGACATTCAAAAGGTTTTGTTAGATATGAGAGAGTATCGCATGGGCCTTATCCAAACCCCAGATCAGCTTCGATTTTCATATATGGCAGTCATGGAGGGAGCAAAGAGCATCCTGGGAGATTCAGCTCTACAGAAGCAGCAGCCTGAAGATTGGCAGGAACCAGAAGCTTATTTGGTTTCATCTTCTCAGAGCTCCATCCTGAGTTCAGAGAAACTCAACGGACAGTCTGACTCTTGTACTGAGACACATGATCCAGGAAGAGAACGAGACAGCATACATTCACCAAATGAAGAGCAAACAGAGTTAAAAACATTAAGCCTTCGCAAGCGGAACCGCGAGGAACGGATAGCCAGCACGGCACAGAAGCTGCAGCAAATGAAGTTGAAACTAAGCGATtcggagaaaaagaaagagaagtggCTTTTCTGGAAACCAATTCTCTTAAATGTTGGCGCTGGTGCAGCTGTAGCACTGGGACTGTGCATGTGCTGGGCCTTTTTGTCCCAGTAATGCCGTTTTATCCCACAGATTCCTCTTCTTGTCTTTTATTCTCCCAGGGACCCAAATTATGGTACTCATATTAGTAGGTGCTTGGATGTTTCTAGATAAGggacaaaaaaatgtagaacGATCGTGTTTACAAGCATTCATACCCGGATGTTGTTCATGATTCATTGAATGTTTGTGTCATATGTTGTTATTACAGTGTAACGAATGATGTAGTTACGTTGTAACTACTATTGTAATTCCATCATGGTAAGTTCTCGCGGCCTAACAACTTTCACTGTACAGTATTTTGTCTGAGTTTATATGCGGAGCAATGTTAAACAGACCCTTACCGGTCTGTCTGAGTCAGTTTATTAAATGCGTCTGTTTGCTAAATTTCCACATGGATATTCATAGGGTGACTCATTTGTTTCAGTAGGTCAATGCCCGGTGAGTTTCCGTACATGCACATCTCAGGATCTTCTAGTAATAAACTGACTGTAGATTCAGCCAAATGTAATAAGTGGTCCGATTTCCactttcaaaaatgtacataGTAAACTCTTTACTAAAGAAGAaatattgcca

Function

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 2-like isoform X1

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K18026 PTPN2, PTPT; tyrosine-protein phosphatase non-receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260311.1 True 2024 mRNA 0.44 9 9112262 9118118
XM_043260313.1 False 1672 mRNA 0.44 7 9112262 9116319

Neighbor

gene id symbol gene type direction distance location
cep76 cep76,LOC107684173 coding downstream 1507 9103514 ~ 9110755 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding downstream 82556 9026980 ~ 9029706 (-)
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding downstream 115276 8961054 ~ 8996986 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding downstream 154812 8946171 ~ 8957450 (-)
tapbpl LOC107749174,LOC107684168,LOC107596689,LOC107741975,LOC107564859,LOC107656706 coding downstream 167614 8938547 ~ 8944648 (-)
LOC122360027 LOC107751895,LOC107656720 coding upstream 27782 9145900 ~ 9148999 (-)
LOC122360802 LOC107749154,LOC107596765,LOC107686954 coding upstream 30997 9149115 ~ 9157421 (-)
cmtm8b LOC107749122,LOC107702023,LOC107564882,LOC107751904,LOC107661990,LOC107570991 coding upstream 201437 9319555 ~ 9322529 (-)
ulk4 ulk4,LOC107723070,LOC107704090,LOC107570990,LOC107668185,LOC107657572,LOC107564876,LOC107573651 coding upstream 269392 9387510 ~ 9523997 (-)
ccka LOC107751914,LOC107704089,LOC107601665,LOC107657574 coding upstream 509128 9627246 ~ 9629046 (-)
G110852 NA non-coding downstream 80813 9031135 ~ 9031449 (-)
G110849 NA non-coding downstream 104730 9007297 ~ 9007532 (-)
G110842 NA non-coding downstream 107056 9004538 ~ 9005206 (-)
G110836 NA non-coding downstream 110834 9000787 ~ 9001428 (-)
G110807 NA non-coding downstream 266269 8845525 ~ 8845993 (-)
G110897 NA non-coding upstream 8567 9126685 ~ 9191339 (-)
G111005 NA non-coding upstream 268061 9386179 ~ 9387391 (-)
G111021 LOC102788557 non-coding upstream 481814 9599932 ~ 9607073 (-)
G111024 NA non-coding upstream 502001 9620119 ~ 9620453 (-)
G111025 NA non-coding upstream 505582 9623700 ~ 9624119 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 476040 8633350 ~ 8636222 (-)
G110556 NA other downstream 795577 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 810017 8298789 ~ 8302245 (-)
G110544 NA other downstream 895667 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 1019807 8082900 ~ 8092455 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 27812 9145930 ~ 9152183 (-)
G110974 NA other upstream 152853 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 759093 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1627458 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1739402 10857520 ~ 10883424 (-)

Expression


Co-expression Network