jazf1b (jazf1,LOC572950,LOC107743157,LOC108441515,LOC107684540,LOC107550831,LOC107685586)


Basic Information

Item Value
gene id jazf1b
gene name jazf1,LOC572950,LOC107743157,LOC108441515,LOC107684540,LOC107550831,LOC107685586
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11687295 ~ 11704828 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261757.1
ccgctgtctgcctgtctatctGACGgtgcgcgcgtgcgtgcgtgcgtgcgcgcgaTCTCCTTTCCGCTCGCGCCGTGCTGCTGCTCCTCAATGTAGCAAAGACCATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAACATTTGCCAGTTCGGGGGCTGCGGACTGCACTTCGAGTCGCTGGCCGAGCTCATCGTGCACATCGAGGATAATCACATCGATACAGACCCCCGTGTGTTGGAGAAACAGGAACTGCAGCAGCCCACGTATGTCGCCCTCAGCTACATTAACAGGTTTATGACAGATGCAGCACGGCGGGAGCATGAGTCTCTGAAGAAGAAAGTTCAGCCAAAGCTGTCGCTCTCGCTGACCGGCGGCCTTTCACGCAACAGCGTGGCCACGCCCCCTCGGCACAACAGCGGCAACCTGACTCCGCCCGTGACTCCGCCCATCACGCCGTCGTCTTCATTCAGGAGCAGCACCCCCACAGGCAGCGAGTATGATGAGGAGGAAGCAGAATACGAAGAGTCTGACAGTGACGAGTCGTGGACCACCGAAAGTGCCATTAGCTCTGAATACATCCTCAGTTCCATGTGCATGAACGGCGGTGACGAGAAACCGTTCGCATGTCCCGTGCCTGGCTGCAAAAAGAGATACAAGAATGTGAATGGTATCAAATACCACGCCAAGAACGGCCACCGCACTCAGATCCGCGTTCGGAAGCCCTTCAAGTGCCGGTGTGGTAAAAGCTACAAAAGCTCTCAGGGGCTTCGACACCACACCATCAACTTCCACCCGCCCGTCTCTGCCGACATCATCCGCAAGATGCAGCAGTAGAGAGTGCCAAGATCCTcctcgacacacacacacacacacacatgtatatacagtacaaacacCTACACACCCATCTCACCAGCAGCCATGGCTGTCCATTAACTCTGACTTTGACCCGTCTTCTCCTCAGTTTTTTTTGGAGTACatccaaaaaatatttgtctGGAGGACAGTTTGTCTTTCTCTATTTTACTCTTTCAGGAGTAAGACTTCACCTCCCTTTTCATTCCACTCCTCACGAGGAGGAAACTTTTAATCTTTTTGTATTCCTCTTCCTCAAGGAAGACTCCCTGTATCATTCCGTTCGTTTCAACCATCTTATCAAAAcactacatttttaattgcatgctttaattcagttcttttttttttttattgttatttcctTCGCTTATTTGTATCTTATTAGAGTTCAcggttttgtatttttgcacattcgcttaatcattttttttttttttttttttcctcgtctttatttttttgatgctaGGTGCTTATTGTAAGACTGACGGTATGTTTGGAAAGGAGAGAATCGTGGCCAGCCTCACGCGAGTGGAAAACGAAAGATAGGAAAGGCTTGAAAAGTCCGAATGTTTATCTACCCTGTATAAGCAACATTCATAGCTACAGATTgtgtatataactatatattctATAAGTTTCATAGTCAGATTTAAATTCTATACTTTATTCctaagttttattttgtatattttcaacCGAGCTTCGGAGACGACGTTATCGATTGGATTATGGATGTACAGTTTTCGGTAGTGCTTTCACCCTTTCTGTTAATCTCAGAAAAGCTTTGAGTTATAGCACCAAATGACTCTCAGGTGACAAATCGCCAGCATTTCAAACACACAATCCTGATCTGATAGTATTTTTGAGTAGGCTGTTACACTCTTCCCAGGTCTGCTGTGGCCGGACCGTTCTGGAGCGTCGTAGAACTCCACAGCGATCTGGAGAAGAACCTAAAGCACTTTGTAGTGACCAGTTGCCAACCTGTTTAGGGCATTTTGTATTGCCAACAAGCTACGAAATTCCAAGGACTAATATGGCGTATTGGAGGTCTCTCTTTCTGAggttcttttattattattttttctagcTAAGGGAATTCATTCTTTCGCTATACCTCCAGTGTGCTTGTTAGATGTGAGATTATTGAAACTGGTTGCCTTGAATTGTGGTACACCACAGCATTCCAGTACAGTATATGTGTAGCCAAGTGATTCAGATTGTGTATTCATCCTGATTCTGGCTCGTCTCTGGCGTGTCCGGTTGACTTTTATACCCCTAACCTGTCACTGGGACGATATAGAGTCACAACCCAAAGATATTCAAGTGTGGACTCATACCTTGAAGCAGAAAGGTACTCGATTTGATTTGCTTTTGGACTCGTgggtggtaaaaaaaaatgaaaagtcgcTAGATCTTCCGGAGATGCCGGCCAGGTCAGGGCCTGCCAATCACTCATTATGACATTACTGCATGGACATTAATGTTGTTGGAATTGCAGTATCGGTTTAGATGCAACATTGTAACAGTATTACACTGCCAGTACAGAGGGAAGTATTTGATATATTGTGTACTTAATGTATTGTCTCGATGTGAGtgctttaaattatattttcttaagTTTCTGGACAACAATGTTCCTACATGTAATGAAGTCAGACACCAGGGGTTGTTTTGGAACTGGTGACATTTTCtgcaacaaaactgaaaaaaaaaaaaaaaaaaagctgcttcataaatgtaaacctggttacattttaaatattaaaatggcctctgatatgttttaaaaaaaaaa

Function

symbol description
jazf1 Enables transcription corepressor activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in cytosol; fibrillar center; and nucleoplasm. Part of transcription repressor complex.

NR:

description
juxtaposed with another zinc finger protein 1-like isoform X1

GO:

id name namespace
GO:0007368 determination of left/right symmetry biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K19495 JAZF1; juxtaposed with another zinc finger protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261757.1 True 2658 mRNA 0.44 5 11687295 11704828

Neighbor

gene id symbol gene type direction distance location
hibadhb hibadhb,hibadh,LOC107685537,LOC107550829,LOC107744697,LOC107743154,LOC107684541,LOC108441516 coding downstream 25063 11653213 ~ 11662232 (-)
hoxa13b hoxa13b,LOC107743224,LOC107685614,LOC107596755,LOC107744698,LOC107550814,LOC107684536 coding downstream 38426 11646850 ~ 11648869 (-)
hoxa11b hoxa11b,LOC107743198,LOC107596728,LOC107685585,LOC107744726,LOC107684537,LOC107550813 coding downstream 45786 11639005 ~ 11641509 (-)
hoxa10b hoxa10b,LOC107685613,LOC107743223,LOC107550811,LOC107744724,LOC107684558 coding downstream 50692 11633490 ~ 11636603 (-)
hoxa9b hoxa9b,LOC107743222,LOC107684557,LOC107744723,LOC107685612,LOC107550810,LOC107596757 coding downstream 53951 11629099 ~ 11633344 (-)
cpvl cpvl,LOC107743225,LOC107684544,LOC107745375,LOC107550833,LOC107685540,LOC107596754 coding upstream 70146 11774974 ~ 11779980 (-)
fkbp14 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding upstream 115959 11820787 ~ 11823551 (-)
colq colq,LOC107743227,LOC107745382,LOC107684559,LOC107685587 coding upstream 135073 11839901 ~ 11854994 (-)
hacl1 hacl1,LOC107743162,LOC107685543,LOC107745383,LOC107684560 coding upstream 150193 11855021 ~ 11865183 (-)
ankrd28b ankrd44,ankrd28b,LOC107685545,LOC107745379,LOC107550837,LOC107596646,LOC107684548 coding upstream 164370 11869198 ~ 11885649 (-)
G111559 NA non-coding downstream 21021 11662918 ~ 11666274 (-)
LOC122361126 NA non-coding downstream 117558 11562878 ~ 11569737 (-)
G111516 NA non-coding downstream 142963 11543916 ~ 11544332 (-)
G111508 NA non-coding downstream 198468 11487682 ~ 11488827 (-)
LOC122360676 NA non-coding downstream 206068 11480106 ~ 11481227 (-)
G111623 NA non-coding upstream 69091 11773919 ~ 11774181 (-)
G111625 NA non-coding upstream 75959 11780787 ~ 11781172 (-)
LOC122360397 NA non-coding upstream 78867 11783695 ~ 11784334 (-)
G111639 NA non-coding upstream 113631 11818459 ~ 11819778 (-)
G111661 NA non-coding upstream 237536 11942364 ~ 11943955 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 275518 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 300302 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 400863 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 803871 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 922990 10745576 ~ 10764305 (-)
LOC122361049 c16h2orf66,LOC107743229 other upstream 160852 11865680 ~ 11867315 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 658957 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1949232 13654060 ~ 13683909 (-)
G112478 NA other upstream 2529726 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2793435 14498263 ~ 14503136 (-)

Expression


Co-expression Network