G12406



Basic Information


Item Value
gene id G12406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 18842822 ~ 18843057 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU13736
ATTTTACTCCTGGAACTTGCTGAAGAAGTGTATTCAGCTTTGATACTTTCCACAAAAAAGTACAAAAAAGGGCTTGAAACTCACAATAAACTAGATTGGACAATAGGTGGCGCTATAACTGTTAAAAAGCTTTAAAAAAACATATATTTCCTTTGTAAATTGCCTGTAAATGGTCTTTTCCATCTATGATCTAGGTGGTTACAGGCTTCCTAAATAAAAAAGGGCTTGAAACTCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU13736 True 236 lncRNA 0.39 1 18842822 18843057

Neighbor


gene id symbol gene type direction distance location
CI01000000_18815522_18834911 OGT, OGT.1 coding downstream 7911 18815473 ~ 18834911 (-)
CI01000000_18789985_18793339 CCNG1 coding downstream 49483 18789985 ~ 18793339 (-)
CI01000000_18779242_18784513 GABRA6A, GABRA6 coding downstream 58309 18778960 ~ 18784513 (-)
CI01000000_18721338_18772372 GABRB2, GABRB2L coding downstream 70150 18721275 ~ 18772672 (-)
CI01000000_18665046_18710097 ATP10B coding downstream 132711 18664585 ~ 18710111 (-)
CI01000000_18948340_18951635 NKX1.2LB coding upstream 105070 18948127 ~ 18951954 (-)
CI01000000_19057376_19068807 NA coding upstream 214234 19057291 ~ 19068807 (-)
G12397 NA non-coding downstream 31337 18807824 ~ 18811485 (-)
G12378 NA non-coding downstream 282747 18559822 ~ 18560075 (-)
G12329 NA non-coding downstream 395249 18440497 ~ 18447573 (-)
G12190 NA non-coding downstream 564298 18018668 ~ 18278524 (-)
G12414 NA non-coding upstream 21274 18864331 ~ 18864858 (-)
G12415 NA non-coding upstream 24794 18867851 ~ 18895992 (-)
G12417 NA non-coding upstream 26637 18869694 ~ 18871234 (-)
G12401 NA non-coding upstream 42555 18885612 ~ 18908827 (-)
G12400 NA non-coding upstream 57888 18900945 ~ 18903059 (-)
G11107 NA other downstream 2174875 16667118 ~ 16667947 (-)
CI01000000_16354158_16360016 NA other downstream 2478275 16353959 ~ 16360213 (-)
G10672 NA other downstream 2611696 16226287 ~ 16231126 (-)
CI01000000_14200000_14436182 TENM2 other downstream 4344228 14200000 ~ 14436253 (-)
G9602 NA other downstream 4496288 14341002 ~ 14346534 (-)

Expression



Co-expression Network