CI01000001_00925612_00928679



Basic Information


Item Value
gene id CI01000001_00925612_00928679
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 925440 ~ 928949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000001_00925612_00928679.mRNA
AGTGCAAGATTAGGGATTTATGAAGACGGAGTTAAACGCAAGGGTCAGTTTTGTCTGGGATTTTGCCCGTTCAACATGCATCTTCTCTAATGCAGTCAGACGTCTCACTAAAAGGAGAGATTGTGCTCCGAAGCAACCATTTCTCTCTCTTTCTGTATCTAGGAGCCCAAGACACCGATACAGAACTGAGTGACGCTTCCTTAAAGTGAGCCAGTGAAGAGGATCGGATGAAGTGAGTGAGTGCGTTAAATAGGGCTTGGACACCTCAGCATGATAATTTTCTATCAGTGCCGCCCAGAGGAATCTGACAGGCCTTATGCTGAGTCGGCAGTCTGTTGGAGACTGGCAGGCGTGGCCTTTTATCCTTCCACATGTTTCACAGCAATTGGACAATCAGCCACTGCAGTGAAAATCCATAGTATTGATCGGCCCTGTATCTTCTCTATAATTCTCCAGCAGGAAATCCCTGATGACAAATTATATCTGCACCAGTTTTTGATTGGTGCTTTGATGCCTCTCATTCACGCTTTTTGCATGGGACTCACACATAGCCTGACTACAACCGCAAGGCTCTCGAGCACGCCGCTTTGCATCTCTTGTATTCCCAGGCTTTGTCTTGCTCTGGGTATATCGCGGCGTGCGTGTCAGCAGCTGTGTCAGTGTCGCACCTGGTGGTGGATTTTGCATATGCAATCACAGCACAAGTTAACCCCAACATTACAGAGTACAGATGTTGCAATCCCCCGTGCTGCTTTATCAGAGTGAATATCAGCCCGGAACGGCAGCAGAGCATGAAACGCTCTAATTTTAGGACAGATTTCCTCTCCTGAGACATAATCTAATTAATGGAATAACCAATCAATATGGTGCATTTCCATTTTTAGCTGTAATTTGTGGGCTGTGTACGGGATATCTGCTCTGCTGTTAAAATAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000001_00925612_00928679.mRNA True 937 mRNA 0.46 2 925440 928949

Neighbor


gene id symbol gene type direction distance location
CI01000001_00872245_00878013 ZFP64 coding downstream 47427 870806 ~ 878013 (-)
CI01000001_00839822_00841040 NA coding downstream 83019 839630 ~ 842421 (-)
CI01000001_00808831_00814314 SALL4 coding downstream 110799 807938 ~ 814641 (-)
CI01000001_00754687_00806154 ATP9A coding downstream 118898 754565 ~ 806542 (-)
CI01000001_00716122_00741331 NA coding downstream 183820 716103 ~ 741620 (-)
CI01000001_01030701_01030988 NA coding upstream 101305 1030254 ~ 1031164 (-)
CI01000001_01033836_01034518 NA coding upstream 104387 1033336 ~ 1034920 (-)
CI01000001_01056812_01066005 NA coding upstream 127503 1056452 ~ 1066123 (-)
CI01000001_01068423_01079855 NA coding upstream 138691 1067640 ~ 1080617 (-)
CI01000001_01158947_01164142 ZNF217 coding upstream 229449 1158398 ~ 1165151 (-)
G13266 NA non-coding downstream 3955 921263 ~ 921485 (-)
G13265 NA non-coding downstream 4295 920915 ~ 921145 (-)
G13264 NA non-coding downstream 5920 919239 ~ 919520 (-)
G13262 NA non-coding downstream 8993 916248 ~ 916447 (-)
G13286 NA non-coding upstream 23796 952745 ~ 952993 (-)
G13293 NA non-coding upstream 53974 982923 ~ 983336 (-)
G13330 NA non-coding upstream 114712 1043661 ~ 1045223 (-)
G13370 NA non-coding upstream 157854 1086803 ~ 1115769 (-)
CI01000001_00362143_00378213 NA other downstream 528307 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 667923 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 790515 122814 ~ 131380 (-)
G14104 NA other upstream 834720 1763669 ~ 1771468 (-)
G14219 NA other upstream 1065261 1994210 ~ 1994898 (-)
G14228 NA other upstream 1127025 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 1330440 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3463365 4392314 ~ 4399804 (-)

Expression



Co-expression Network