G123257


Basic Information

Item Value
gene id G123257
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 361393 ~ 363036 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU182105
attaaattatatttgatcgctagagaagaggtgataaattgaagagcAACGCTACAcggagctacaaacaaaccaacctctcagcagacaggagcaatcgagcaggAGACGATTTCTAGTCATActaaactttaaaacattttgggtAAATCAAAATTGGGGGCAATTTTCAATCCACTGgtataaatctaatttatttattgtttttgaccAACAGttgaccaacaccagcagatacCATTGCTCCCCAgtcatcacagactgtggaaaccTAACTctggacttcaagcaacttgggctatgagcttctccaccaTTCCTCCagaccttggtttccaaatcaaatacaaaacttgctctcatttgaaaagaggactttggaccactgggcaacagtccAGCTCTTCTTCTCATTAGCCCAGATGACTGCACACGTGTACAGATGACGGACCAGGATGACTGCTGTTCGGAAGAAGCCGCAGGAAGACACCGTCGCCCCTCGCGCCCGGACCAGAGTGGGGAGCGCGTGCAGCcaccggactccgccccttacctggaagCTTCCTCCTAGAACACTGCCATACCTACACTCCCTCTGCAACatgacgaggacaccagttcgtTTATTTTGTACActcttttccctggacactttattattttgtatttttattaatgaaaagccTCTCCAAGGCCTGACGCCACTTTCACTATGTGACCGATTGACGAGGTTGACGCCTGGGG

Function

GO:

id name namespace
GO:0047173 phosphatidylcholine-retinol O-acyltransferase activity molecular_function
GO:0008374 O-acyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182105 True 744 lncRNA 0.46 2 361393 363036

Neighbor

gene id symbol gene type direction distance location
LOC122362472 si:ch211-234p18.3,rasgrf1,LOC107690363,LOC107691143,LOC107709805,LOC100708145,LOC102298753 coding upstream 6508 333483 ~ 354885 (+)
LOC122322910 NA coding upstream 153267 207287 ~ 208126 (+)
LOC122322909 NA coding upstream 155792 204768 ~ 205601 (+)
cfap45 cfap45,LOC107758640,LOC107549265,LOC107717174,LOC107596892 coding downstream 9106 372142 ~ 383071 (+)
tbrg1 tbrg1,LOC107549267,LOC107669777,LOC107717176,LOC107676756 coding downstream 22428 385464 ~ 393966 (+)
c18h19orf54 LOC107549270,LOC107748228,LOC107669776 coding downstream 83665 446701 ~ 451209 (+)
rasgrp4 rasgrp4,LOC107758090,LOC107676755,LOC107662146,LOC107758237 coding downstream 185781 548817 ~ 566665 (+)
ppp1r13l ppp1r13l,LOC107757772,LOC107758239 coding downstream 217710 580746 ~ 596414 (+)
G123282 LOC107676751,LOC107758351 non-coding downstream 101068 464104 ~ 476401 (+)
G123301 ryr1b,LOC107676751,LOC107596888,LOC107758351 non-coding downstream 148262 511298 ~ 512632 (+)
G123312 NA non-coding downstream 166362 529398 ~ 529619 (+)
G123422 map3k10,LOC107560156,LOC107554498,LOC107758231,LOC107668271,LOC107756783 non-coding downstream 487617 850653 ~ 919977 (+)
G123472 yap1,LOC107758259,LOC107662128,LOC107746561 non-coding downstream 660069 1023105 ~ 1051430 (+)
G123243 NA other upstream 252561 108369 ~ 108832 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other downstream 451715 814751 ~ 823675 (+)
tmem123 NA other downstream 682158 1045194 ~ 1054735 (+)
G123568 NA other downstream 1202390 1565426 ~ 1571931 (+)
G123664 NA other downstream 1638750 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 1844163 2207199 ~ 2240260 (+)

Expression


Co-expression Network