G123507


Basic Information

Item Value
gene id G123507
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 1401096 ~ 1403972 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU182513
TAATGGTTTGGTCACGTTCAGGCCCCACAAGCTTGTAAAACTCATCCAAGGAAGTAAGGTCACTCTCAGTAAGCAGCGAAGGCCCCCCGGCTCCTTGAAGCAACTCTTGTCGCACACTTTCATCCCCAAGTCGATCGAGAAGAAACTGCAGCTCCAGAACCTGTTTCAGCCTTTTCTGTTCTACCTCTTCACGCTGGAGTTGCTCACGACGTGCTGCTTTCTTAACACCCTTCTGGATCTATTTTCTTGACCCAACACCAAAAAGCTCTTGTGCAGTTCCCGTGCAAACTCAAGGTTATGGATTACCTCCTGGTACTTAGACAGGGCTTCCTAGATCGATTTAGAAAAGAGACAGATTTCTGGaatctgaaaaacaattaaCAGGCAGCAAAAACACGGAGTGTCCTTCACTCACCAGCTGGTCCTGGTTGAGACTTTCCCCTTTGATGTTTCTGGCCTGATAATCATCAAGCTTGCTCttttcttttccataTTGCGCACTTTCTTTTCGAGAACCACCAGCACCTGCTTCAGGGCCTCTGACCGGGTTCCAGTCAGCTGGTTGCTGGATGTGATTTGGTTCATTGTTCCGGGAGCAGATCCCAAGTCTGGACTGCCAGACTTCACAGTCCTGGTTCCATTtgttgcttttaatttattttccaatttACTAAGGGATCCGCCCCGCCGGCCTTACCGACAACTGAGAGCGAGTGAAAGGCGAGGAAAAGGTTTATAATGAGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU182513 True 745 lncRNA 0.48 4 1401096 1403972

Neighbor

gene id symbol gene type direction distance location
nucb2b nucb2b,LOC107746563,LOC107656849,LOC107657662,LOC107554560,LOC107739429 coding upstream 25056 1369493 ~ 1376040 (+)
tbcb tbcb,LOC107687357,LOC107662130,LOC107758256 coding upstream 355969 1040136 ~ 1045127 (+)
qpctla qpctla,LOC107758254,LOC107554496,LOC107746558,LOC107687360 coding upstream 372565 1023407 ~ 1028531 (+)
sipa1l3 sipa1l3,LOC107687359,LOC107554497,LOC107662132,LOC107758252,LOC107746578,LOC107560140 coding upstream 381798 951898 ~ 1019298 (+)
ttc9b ttc9b,LOC107756857,LOC107560155,LOC107662133,LOC107758251,LOC107657468 coding upstream 486484 891613 ~ 914612 (+)
lmo2 lmo2,LOC107554475,LOC107746581,LOC107656846,LOC107739430,LOC107554555 coding downstream 5369 1409341 ~ 1413595 (+)
alx4b alx4b,LOC107554474,LOC107656842,LOC107746571,LOC107752273,LOC107657598,LOC107554564,LOC105910397 coding downstream 18569 1422541 ~ 1437003 (+)
c18h11orf58 zgc:56106,LOC107746577,LOC107554484,LOC107554557,LOC107690399,LOC107715205 coding downstream 208629 1612601 ~ 1614722 (+)
rcn2 rcn2,LOC107725741,LOC107691133,LOC107690352,LOC107562116,LOC107567882 coding downstream 319650 1723622 ~ 1725947 (+)
pstpip1a pstpip1a,LOC107691132,LOC107715239,LOC107562121,LOC107690351,LOC107567896,LOC107725740,LOC108435346 coding downstream 322267 1726239 ~ 1736383 (+)
G123508 NA non-coding upstream 1306 1398396 ~ 1399790 (+)
G123511 NA non-coding upstream 21197 1376817 ~ 1379899 (+)
G123493 NA non-coding upstream 151048 1243362 ~ 1250048 (+)
G123491 NA non-coding upstream 164175 1231766 ~ 1236921 (+)
LOC122323124 NA non-coding upstream 271765 1096463 ~ 1129331 (+)
G123527 NA non-coding downstream 98594 1502566 ~ 1510640 (+)
G123587 NA non-coding downstream 184782 1588754 ~ 1590287 (+)
G123599 NA non-coding downstream 212171 1616143 ~ 1619425 (+)
G123576 NA non-coding downstream 289144 1693116 ~ 1739132 (+)
G123622 NA non-coding downstream 354273 1758245 ~ 1759869 (+)
tmem123 NA other upstream 346361 1045194 ~ 1054735 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other upstream 577421 814751 ~ 823675 (+)
G123243 NA other upstream 1292264 108369 ~ 108832 (+)
G123568 NA other downstream 161454 1565426 ~ 1571931 (+)
G123664 NA other downstream 597814 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 803227 2207199 ~ 2240260 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other downstream 897786 2301758 ~ 2319140 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other downstream 1006761 2410733 ~ 2461790 (+)

Expression


Co-expression Network