G125461 (ugt5c1,LOC107692742,LOC107738533)


Basic Information

Item Value
gene id G125461
gene name ugt5c1,LOC107692742,LOC107738533
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10824974 ~ 10837276 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU185257
AGGCTAGTTCTCTGGAGAAATGCTATCGCTAACAACTTTATATCTAACAACTTTGTAAGTGACATCTGTGCCATAAGGATCAAATTACAAACAAACTTTGCACTTTGAACTGTCTTGTTATTGGTTATGCTCACTGCATTTTGAATAATCACTTCTGATATGATGCAATGCTAATAATGTGGTCAGAGAGGCCAAGATATCCTGACTGCAGAAAGCAGAAGCACATTATATGAACACATAAAACACCaggacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGGAACACATAAAACACCaggacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGGCAAGATGACACCATTTTCTAAGAATACTGTATCTGTCCCACTCTGGATACcgtttgtaatgctttttggTTCTGTCTGTGATGGTGGCAAAATCTTGGTGGTGCCTTTGGAGGGAAGTCACTGGGTGAACATGGAAGTCCTCATCAAGGCTTTACATGGTCAAGGGCACAGTGTTGATGTATTACGCCTCCAGTAGCTGGTTTATCAAGGAGAATTCAACTTATTATGGTTCTATAACTATACCCAGCACCGAAGCAATGGATGAAAAATTTATAGAAAACATGGTTTCCGAATCAATCAACTATGAAAGTGGAAAGAGCAACTGGCTGGGCACTTTAAGTCTGTATTTGGATACAGTTAAATACActtataaaatgcatgaaatggtATGTCAACttataataaacatgtttgaaaGTGAGGAAATTATGAAGACACTGAAGGAAAAGCAATATGATCTGGTGCTCACTGATCCGTGTGGGCTGCAGGCATTTTCCTGGCTCATAAATTCAAGTTACCCTTGGTGTATAATGTAAGATGGACCACTCCTGGAGAGGGACATTTTGAGATCGCTCCCTCACCGTTGTCCTACATCCCTATCACAAGATCtagaaacacagacaaaatgaacttttttcaacgagtgcaaaatattttcagttatttgctAATGTACTTTCAGTATGGCTATTTTAATTTGGCACAGTACCAAGCACTTTGTGACAAATATTTCCACCCACCTGTACGTTTTTATGAACTTCTCCAGGGGGCTGATATATGGCTTATGAgggttgattttgtttttgaatttccACGTCCAACAATGCCAAATGTCATCTACATTGGTGGCTTCCAGTGCAATCCAGCGAAGGCCCTTCCACATGACCTGGAAGTCTTCATGCAAAGTTCTGGAGAGCATGGAGTGGTTATCATGTCTCTAGGATCATTTATCAGTGTCCTACCAGATGAGATATCAACTGAAATAGCGGCAGCTTTTGCTCGGCTCCCTCAAAAGGTTATTTGGAGATACACTGGAAAAAGACCATCTACTTTGGGCAACAACACATTGCTGGTTGACTGGATGCCACAAAATGATCTTCTAGGGCATCCAAAGACTAAAGTTTTTATTGCACATGGTGGAACCAATGGAGTTCAAGAAGCTTTGTATCATGGTGTTCCAGTGGTTGGAATTCC
>TU185261
AGGCTAGTTCTCTGGAGAAATGCTATCGCTAACAACTTTATATCTAACAACTTTGTAAGTGACATCTGTGCCATAAGGATCAAATTACAAACAAACTTTGCACTTTGAACTGTCTTGTTATTGGTTATGCTCACTGCATTTTGAATAATCACTTCTGATATGATGCAATGCTAATAATGTGGTCAGAGAGGCCAAGATATCCTGACTGCAGAAAGCAGAAGCACATTATATGAACACATAAAACACCaggacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGGAACACATAAAACACCaggacagcagcagcagcctttTTGTATTCGTGACTGTCCTTCTCAGCAACTCGCATCCAGCCTGGAGCACCCTCTAGAAGTGAACAGAGAAAGATTATCACTGAACAGCACTGAACAGAAGCAGTCATTATACCTGCAAGATGACACCATTTTCTAAGAATACTGTATCTGTCCCACTCTGGATACcgtttgtaatgctttttggTTCTGTCTGTGATGGTGGCAAAATCTTGGTGGTGCCTTTGGAGGGAAGTCACTGGGTGAACATGGAAGTCCTCATCAAGGCTTTACATGGTCAAGGGCACAGTGTTGATGTATTACGCCTCCAGTAGCTGGTTTATCAAGGAGAATTCAACTTATTATGGTTCTATAACTATACCCAGCACCGAAGCAATGGATGAAAAATTTATAGAAAACATGGTTTCCGAATCAATCAACTATGAAAGTGGAAAGAGCAACTGGCTGGGCACTTTAAGTCTGTATTTGGATACAGTTAAATACActtataaaatgcatgaaatggtATGTCAACttataataaacatgtttgaaaGTGAGGAAATTATGAAGACACTGAAGGAAAAGCAATATGATCTGGTGCTCACTGATCCGTGTGGGCTGCAGGCATTTTCCTGGCTCATAAATTCAAGTTACCCTTGGTGTATAATGTAAGATGGACCACTCCTGGAGAGGGACATTTTGAGATCGCTCCCTCACCGTTGTCCTACATCCCTATCACAAGATCtagaaacacagacaaaatgaacttttttcaacgagtgcaaaatattttcagttatttgctAATGTACTTTCAGTATGGCTATTTTAATTTGGCACAGTACCAAGCACTTTGTGACAAATATTTCCACCCACCTGTACGTTTTTATGAACTTCTCCAGGGGGCTGATATATGGCTTATGAgggttgattttgtttttgaatttccACGTCCAACAATGCCAAATGTCATCTACATTGGTGGCTTCCAGTGCAATCCAGCGAAGGCCCTTCCACATGACCTGGAAGTCTTCATGCAAAGTTCTGGAGAGCATGGAGTGGTTATCATGTCTCTAGGATCATTTATCAGTGTCCTACCAGATGAGATATCAACTGAAATAGCGGCAGCTTTTGCTCGGCTCCCTCAAAAGGTTATTTGGAGATACACTGGAAAAAGACCATCTACTTTGGGCAACAACACATTGCTGGTTGACTGGATGCCACAAAATGATCTTCTAGGGCATCCAAAGACTAAAGTTTTTATTGCACATGGTGGAACCAATGGAGTTCAAGAAGCTTTGTATCATGGTGTTCCAGTGGTTGGAATTCC

Function

symbol description
ugt5c1 Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in intestine and testis.

NR:

description
PREDICTED: UDP-glucuronosyltransferase 2C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185257 False 1632 TUCP 0.42 4 10824974 10837276
TU185261 True 1680 TUCP 0.41 5 10824974 10837276

Neighbor

gene id symbol gene type direction distance location
LOC122363031 LOC107692742,LOC107738533 coding upstream 63430 10744387 ~ 10761544 (+)
acadl acadl coding upstream 463662 10352575 ~ 10361312 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding upstream 489221 10328942 ~ 10335753 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding upstream 504326 10297497 ~ 10320648 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding upstream 610488 10209353 ~ 10214486 (+)
vwa7 vwa7,LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107692747,LOC107557822 coding downstream 22537 10859813 ~ 10870796 (+)
LOC122362996 si:ch211-132b12.1,si:ch211-132b12.2,zgc:158427,zgc:174946,LOC107715134,LOC107679003,LOC107588539,LOC107572724,LOC107679008,LOC106581333 coding downstream 35039 10872315 ~ 10877836 (+)
LOC122362995 si:ch211-132b12.2,LOC107572724,LOC107679008,LOC107679003,LOC107715134,LOC107588539,LOC106581333 coding downstream 47321 10884597 ~ 10889401 (+)
LOC122362997 si:ch211-132b12.1,zgc:174946,zgc:158427,si:ch211-132b12.6,si:ch211-132b12.3,LOC107715134,LOC107679003,LOC107588539,LOC107572724 coding downstream 52210 10889486 ~ 10897062 (+)
LOC122362532 LOC107711073,LOC107679025,LOC107714437,LOC107566685,LOC107684602,LOC100332250 coding downstream 170314 11007590 ~ 11028729 (+)
G125470 LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099 non-coding upstream 37951 10785905 ~ 10787023 (+)
LOC122362658 NA non-coding upstream 222128 10601124 ~ 10602846 (+)
G125369 NA non-coding upstream 415374 10409318 ~ 10409600 (+)
LOC122362497 LOC107700584,LOC107746936,LOC107588541 non-coding upstream 416158 10404414 ~ 10408816 (+)
G125367 LOC107588541,LOC107700584,LOC107746936 non-coding upstream 417586 10406970 ~ 10407388 (+)
LOC122363043 NA non-coding downstream 8176 10845452 ~ 10849689 (+)
G125481 LOC107679019,LOC107711015,LOC107714456,LOC107692743,LOC107557844 non-coding downstream 60888 10898164 ~ 10920333 (+)
G125480 rasa2,LOC107566682,LOC107714449,LOC107679023,LOC107679004,LOC107710946,LOC107684605 non-coding downstream 99089 10936365 ~ 11044066 (+)
G125540 NA non-coding downstream 461727 11299003 ~ 11299260 (+)
LOC122362586 NA non-coding downstream 470271 11307547 ~ 11309510 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other upstream 106889 10632477 ~ 10718085 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other upstream 399134 10416013 ~ 10425840 (+)
G125192 NA other upstream 1459486 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 2277251 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 2288026 8176353 ~ 8536948 (+)
G125496 snrpd2,LOC106612977 other downstream 130809 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 388837 11226113 ~ 11233814 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other downstream 397055 11234331 ~ 11237147 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other downstream 492945 11330221 ~ 11345797 (+)
G125830 NA other downstream 1972174 12809450 ~ 12822781 (+)

Expression


Co-expression Network