G125540


Basic Information

Item Value
gene id G125540
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 11299003 ~ 11299260 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU185379
CCAGTCTGGGGGTCTGAAATAACACACCCTATCAACCTTATCAATCGGTCTGAACATGCATTCAGGTTGACATAGAAACAACCTGGCAACCACTCAAAAACACActagcaaccacttagcaacACACTTTTAACCATTCAGAATACCCTAGTGTGTTTGagatagcaaccacccaaagcaccctagcaaccacacagaaacacattttccatCAGTCAGAACACCCTAGTGTGTTTGAAAAGATAACACCCAGACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185379 True 258 lncRNA 0.43 1 11299003 11299260

Neighbor

gene id symbol gene type direction distance location
baz1b baz1b,LOC107684612,LOC107709818,LOC107714438 coding upstream 36933 11245321 ~ 11262070 (+)
bcl7bb bcl7bb,LOC107557834,LOC107692047,LOC107711066,LOC107709815,LOC108429883 coding upstream 54311 11240627 ~ 11244692 (+)
tsen34 LOC107710838,LOC107684621,LOC107709810,LOC107563510,LOC107734988 coding upstream 58938 11237533 ~ 11240065 (+)
ankrd67 si:ch211-203b8.6,LOC107684609,LOC107710859,LOC107691982,LOC107563505,LOC107714442 coding upstream 74495 11218538 ~ 11224508 (+)
veph1 veph1,LOC107563514,LOC107711033,LOC107679005 coding upstream 92407 11137051 ~ 11206596 (+)
pgr LOC107563516,LOC107691935,LOC107732778,LOC107709819,LOC107684613 coding downstream 52552 11351812 ~ 11360805 (+)
LOC122323085 LOC107691900,LOC107574923,LOC107715548 coding downstream 598999 11898259 ~ 11901956 (+)
nectin1b nectin1,pvrl1b,LOC107670612,LOC107691861,LOC107563312,LOC107758086,LOC107561861 coding downstream 890204 12189464 ~ 12379252 (+)
LOC122362670 LOC107691836,LOC107758058,LOC107578181,LOC107572720,LOC107670622,LOC107714531 coding downstream 1292807 12592067 ~ 12595389 (+)
st14a LOC107758079,LOC107668533,LOC107554966,LOC107714535,LOC107670627 coding downstream 1554900 12854160 ~ 12867723 (+)
G125480 rasa2,LOC107566682,LOC107714449,LOC107679023,LOC107679004,LOC107710946,LOC107684605 non-coding upstream 254937 10936365 ~ 11044066 (+)
G125481 LOC107679019,LOC107711015,LOC107714456,LOC107692743,LOC107557844 non-coding upstream 378670 10898164 ~ 10920333 (+)
LOC122363043 NA non-coding upstream 449314 10845452 ~ 10849689 (+)
G125470 LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099 non-coding upstream 511980 10785905 ~ 10787023 (+)
LOC122362658 NA non-coding upstream 696157 10601124 ~ 10602846 (+)
LOC122362586 NA non-coding downstream 8287 11307547 ~ 11309510 (+)
G125709 NA non-coding downstream 604199 11903459 ~ 11903992 (+)
G125714 LOC107568232,LOC107671620 non-coding downstream 739685 12038945 ~ 12039444 (+)
G125750 NA non-coding downstream 1094251 12393511 ~ 12394732 (+)
G125753 NA non-coding downstream 1112605 12411865 ~ 12412245 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other upstream 61856 11234331 ~ 11237147 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other upstream 65189 11226113 ~ 11233814 (+)
G125496 snrpd2,LOC106612977 other upstream 329236 10968085 ~ 10969767 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other upstream 461727 10824974 ~ 10837276 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other upstream 580918 10632477 ~ 10718085 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other downstream 30961 11330221 ~ 11345797 (+)
G125830 NA other downstream 1510190 12809450 ~ 12822781 (+)
G125836 NA other downstream 1581328 12880588 ~ 12884612 (+)
napab napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256 other downstream 1617966 12917226 ~ 12925468 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other downstream 1647581 12946841 ~ 12955945 (+)

Expression


Co-expression Network