G125881 (wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204)


Basic Information

Item Value
gene id G125881
gene name wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13350491 ~ 13351730 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU185889
CTCTGAACAGGAGTCTGGGGACAGAGAGTCTGTGAGCCCCGAGCGGGACGGCGGTCTCACCCTGGTTGCGCGGGGCAGGAGGGCTGTCCATGCAGCCCGGAAGATAAGGCCCGCTGGAGAACATCCTGCTCTGGCTGGACGGAGAATCAGCAAACGGTCCGTGCATCCCCGTGAGCTGCCCCGAGAAGTGCACGGTGAAGGCCCCCAGACCGCAGTGAGGGTCCTCGTGGGGGTCTGCGGGCCCCCAGCTCGGCTCCTGTTTGACGAAGGAGTGGGAGGGAAGAGATCCGTACGGGGAGGCAGGGTGGAAGTCCAGCATCGGTCCCCACTGCGGAGCTCCGCCGACAGGCAGGGAACAGTTTGCGTTCGGGACCGCTGGAAGCAGGGAGCTCAGGTCTCTGACGTCCGATCCCATCAGGCCGCACGCCTCCGTCAGCATTTAGGATTTTCTTTTTCGCGACACCCTTGAATATCTGCAGACTGGAACCTGCGCTCCAAGCTACAGGAATAAATCTCAAAGAAAAGATCTTGAAGGGGTCCCAGCAGTCCAGCAGAGAGCACGTTTATCTGCTTCTGAGATGGGAAGCGTGTTTGGAGGAGAGTTTGAGCTGGAGTTACTTCACTCTTGAGCATTTGTCTGGGTCGGTCAGCTCTAAAATCCACCCCACCATCTCCAGAGGAGGAGTCAGAGCTCGGGGTTGTGAAAAAAGTCAGTTCTTCTGTACCTTACTCATCTTTTACTCGAACAGCACTTTCAGTCCCCCTCTGAGTAATGCCTGGATGTGTGTGCGTGAACATGAGTGTGTGGGTGGGAGCGTGTgggtgtttgtttgttgtttggttAGCATGAAACCTAATTGTGTAAATGATGTTCCTCAGAGAACTTAATTTTTcctcaaatttttatttttatcaaagttTTAAAAGTTCCACTCCTCATGGCAGAAAAAATTCTTTATAGCATGTTCTTGGGGAATCAAGAACGGTTTGTGTACTGAAATGAATGCTGATAAGGGTCTCCAACTGAAGTGTTGAGTCTGTATAAATGAGTGCTATCTTAGGGATTTGCGTTGTCAGAGAAAAGATTCAATTAAACTGATGGATGTGCACTGGGATTGGGCAACGCTATTGTGAAATACCAGCACCGTCTGTTGCCTGTTTGAAAAAACATGTGAATGAAAGGCAAAAGGGGAATTTTTAATCTTGTTAGTAAAAACTCGATGCTGAGTCTTATATGACA

Function

symbol description
wt1b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including animal organ development; fin regeneration; and macrophage chemotaxis. Predicted to be located in cytoplasm and nuclear speck. Is expressed in several structures, including eye; heart; intermediate mesoderm; pleuroperitoneal region; and podocyte. Human ortholog(s) of this gene implicated in several diseases, including Denys-Drash syndrome; Frasier syndrome; malignant mesothelioma; nephroblastoma; and nephrotic syndrome type 4. Orthologous to human WT1 (WT1 transcription factor).

NR:

description
PREDICTED: Wilms tumor protein homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185889 True 1240 lncRNA 0.50 1 13350491 13351730

Neighbor

gene id symbol gene type direction distance location
kifc3 kifc3,LOC107670565,LOC107670616 coding upstream 13049 13302536 ~ 13337442 (+)
cngb1a cngb1a,LOC107717637 coding upstream 50853 13273197 ~ 13299638 (+)
large2 gyltl1b,LOC107670633,LOC107670096,LOC107554994,LOC107602128,LOC107758043 coding upstream 185297 13051968 ~ 13165194 (+)
arfgap2 arfgap2 coding upstream 349631 12990848 ~ 13000860 (+)
fam118b fam118b,LOC107669270,LOC107565084 coding upstream 371857 12968956 ~ 12978634 (+)
eif3m eif3m,LOC107602127,LOC107671036 coding downstream 10817 13362547 ~ 13366713 (+)
prrg4 prrg4,LOC107670609,LOC107671204,LOC107758038,LOC107717603 coding downstream 19972 13371702 ~ 13376207 (+)
qser1 LOC107575561,LOC107758064,LOC107602126,LOC107671129,LOC107670638 coding downstream 25476 13377206 ~ 13391679 (+)
depdc7a LOC107576633,LOC107758055,LOC107670610,LOC107717627,LOC107673282 coding downstream 44481 13396211 ~ 13406293 (+)
LOC122362741 LOC107758035,LOC107576241,LOC107672562 coding downstream 72127 13423857 ~ 13426248 (+)
G125879 NA non-coding upstream 3554 13346678 ~ 13346937 (+)
G125877 NA non-coding upstream 11425 13337754 ~ 13339066 (+)
G125855 si:ch211-71n6.4,LOC107758068,LOC107753016,LOC107670624,LOC107578946,LOC105902995 non-coding upstream 337591 13009874 ~ 13012900 (+)
G125784 NA non-coding upstream 709055 12641192 ~ 12641436 (+)
G125783 NA non-coding upstream 714108 12636156 ~ 12636383 (+)
G125886 NA non-coding downstream 15686 13367416 ~ 13369511 (+)
G125887 NA non-coding downstream 17983 13369713 ~ 13370781 (+)
G126098 NA non-coding downstream 191523 13543253 ~ 13543775 (+)
LOC122323141 NA non-coding downstream 260329 13612059 ~ 13693855 (+)
G126128 NA non-coding downstream 291668 13643398 ~ 13644760 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other upstream 128343 13216484 ~ 13222148 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other upstream 394546 12946841 ~ 12955945 (+)
napab napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256 other upstream 425023 12917226 ~ 12925468 (+)
G125836 NA other upstream 465879 12880588 ~ 12884612 (+)
G125830 NA other upstream 527710 12809450 ~ 12822781 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other downstream 75314 13427044 ~ 13430765 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other downstream 318559 13670289 ~ 13706114 (+)
G126132 foxa3,LOC107717614,LOC107692498,LOC107602118,LOC107727696,LOC107575381,LOC107670595 other downstream 327315 13679045 ~ 13682571 (+)
lbhl lbhl other downstream 510141 13861871 ~ 13869332 (+)
G126175 NA other downstream 557834 13909564 ~ 13912800 (+)

Expression


Co-expression Network