daw1 (daw1,LOC107727686,LOC107576612,LOC107717604)


Basic Information

Item Value
gene id daw1
gene name daw1,LOC107727686,LOC107576612,LOC107717604
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13670289 ~ 13706114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU186247
ttttttttttttttttttttttttttATTCACAGTAcgcaaattttattttgaaaagataAATACATTCAGGTATACCGTGACAGACTGGATACAGTTGTGTGCCTTCAATGctgatattaaaacacattactaTTATGTTACTATGCAGAGAAAACCATAACGCCACCAGATTTCACGTTTACACGTCAACTTTTACGTGACAAAACTGTACTTGTACTTTAAATATACTCTTTTATGTTCATACTTGTATATTCAAACTTTTACAGTAGTCTGGTGAGACTTTCAGTGCTGTGATCTCGTCCGTCTGCGTCTTTGCGAtcgtaaaacataaaaactcaaATTTCCATTTGCCCAAAGATACAGTAGATCACAGTCTAAACTATTTACATCTAGCCAAAATAAAATCTCTTAAATAACAGTAGTCACACGAAACTAAACGTACAATTCAGTCTCAGAGGAACAATAAAATGACCGAACGTGTTCGCCGATGTAAACTTAAAACGACAAAGTGTGTTTGGAATGGGGTCTCACTATATTTCACgctttaaatacaaacatttaagtATCCTTAAATCCCTACGCCAGAGCTCACACGTCTGTTGTTCTTGATAAAAAGTCACATGTGCATTTGAAACGGGTTTGTTGTACAGTAAAAATCCGCAAGCTACAAAACGTCAAGGCTGATTGGTCGGTTTAAACCATGTTCCTCTAGCTGGTGACCGGTGGATCTAACGTTGCGTGCGCGTAAAGACAGGAACATGCGTAATTTAAAGGGAAATATCCTTAAATCACAATCTATGCGAATGTGCATCTCTAGCACATATTTATAGACAAGGCATTTCTTCCTACAGCGTATCCCATAATTCCTGTGATCTAGCAAAGACATATGCAAGTGTGACGAGAGACGGTGGAATGCAAAGCTACGAATCCTAAAGATATCAAATGTGGATGTGCTGGTGGTCGGAGAGGGCAAGTTTGGTATTAAGCAAGCCTCATGCTAAGGATCTTGGGATTGGGAGTGTCTCGTAAACCTCGCTATCCTGCGACGAACAGTTTCACAGCTGAGCTCTAGAAAAACGTGCTGATGTACAGTCATGGCAGTGTCTGCGGATGCGTCTGTGGGATCTATAAACTGTTTGCTTGTGTGAGGGTGTTAGTGGCTCAAATGGGATTGGTTGGTGTTTTCACACCGGCTCCTGACTATATATACGTGTGCTAGCACAGGACGGATATGTGGCGTCTCTAGTCGGCTGGTGCTCTAGCGCTTGGTCTTCAGTATCCAGTCGAAGAGGCTGGGCACAGGCCGTCCTCTGTGCTCCAGGTCCTGGTGGAGCTGACAGAACTGAGCCACGGCGCTGAACAAGTCACCGACACGCCAAGACTTCTGACCTGCCAACTGCACCACTCTGTGGAact
>XM_043216801.1
TTCACAACCGCAAGATTAAGACCCTCATTTCAGGTCCAGTAGCTGTTGGTCTGGTGTCTCTGTTGGTGTTTTTATTCTGTGCagtgtaaaaataaaccaaGCCCAGTCCCTGGTTTCGACAAAACGAGCTGTGCAAGAGTCTTCAGTGGCGTGATGAGACTGAAACGGCTACACATACGATACTACCCACCAgGAATATTCCTGGACTATGAGAAAGGGGGGCAGCTCAGGACGAAATCCATCGATTTGTTAAACTTGACTCCAGAGACGGATGTGAATGAGTTGCTGTCAGACATTAGAGCAGCTGAACCTCTCATCACCTCATCCTGCGTCGAGCAGGTTAAAGTCCTGATCTGCAAACTACAAGAGAAAGTCGGCCAAAAGGATGACCGCAAGTTCTACCTTTTCAGGGCCCTTCAGGCTCACATCTTGCCCCTGACGAACGTGGCCTTCAATAAATCAGGATCGAGTTTCATAACCGGAAGCTATGACAGGACTTGTAAAATATGGGACACCGCATCCGGAGAGGAGCTGCACACTTTGGAGGGTCACAGGAACGTCGTGTACGCCATCGCCTTCAACAACCCTTACGGaGACAAAGTTGCCACAGGCTCCTTTGACAAGACCTGCAAATTGTGGAGTGCTGAAACAGGAAAGTGTTTCTACACGTTTAGAGGACACACGGCAGAAATCGTCTGCCTGTCCTTTAACCCTCAGAGTACCTTGGTTGCAACGGGCAGCATGGACACCACGGCTAAATTATGGGATGTTGAGAGTGGGAAAGAGGTGTCCACACTGGCAGGTCACTTCGCCGAgatcatctctctctcctttaACACAACGGGCGATCGCTTGGTCACGGGGTCGTTTGACCACACTGCCATTCTGTGGGATGTTTCTACCGGCAGCAAAGTTCACGTTCTGACAGGTCACAGAGGAGAAATCAGCTGTGTTCAGTTCAACTGGGATTGTTCCCTCATCGTCACGGCCTCTCTGGATAAAACCTGCAAGgtgtgggACGCAGACAGCGGTCAATGTCTGGCTGCTCTCTTGGGTCATAATGATGAAGTGCTGGATGCGTGCTTTAACTACACCGGTCAACTGATCGCTACAGCCTCTGCTGATGGTACATCAAGAGTGTTCAGCGCAGAAACCTTCCAGTGTTTGTGTCAATTAGAAGGCCATAAAGGAGAGGTATCAAAGGTGTGTTTTAATCCGCAGGGGAGCCGAGTTTTGACGGCGAGCGTGGATAAGACGGCTCGTGTTTGGTGCGTGAAGACTGGAGCGTGTTTGCAGGTGCTGGAGGGACATTCTGATGAGATCTTCTCCTGCGCTTTCAACTACGAGGGAGACACCATCATTACAGGCAGTAAAGACAACACCTGCAGGATCTGGCACTGAGAGAGCGGCCTGAACTCTGATCTTACAGTATTCCTACAGCTCTTTTGATTAAGATATTGTGTGTCATTTTGTCACACTGCCGTAATTTTCAAGTTCACAGAGAACGTGCATGGAGGACATTATGGCTGGAAACTGTCATATATAATGCATCATAAATGTCATGCATTATATCTTTCATAAGTAACTGTAAGCAAAGTTAAAATGGTTTATAATATTTGCAGATTCTTCGTAATGTTTAAAATTGGTTGTTCGCTCCCAGAGGTATTTGTACCATTACTTTCCCCCTTAAAGAATACTCTGGGTCAAATACAAGTTAAACTTATGCTATCAATTATCACAAAAAATTAATGATTCCAAAAATGATGAtatataatggaagtcaatgggaaaaTTTTCAATTTATGTGCATGCTtgtcaccttttttttttttgattgtacAATCTACAATATGAAGTCAGGGATTCAATATTGTAAAATCACACTTATTTTCTGGTGCGTTTATCCTGGAATATTAAATTTTTAGCATGCAAGTCTGTTTTTaggttaaaagaaaaattcacCTCAAAAATCTACTCGCTCTCAGGCCATCACAGACATACAGTATGAGTTACagaatagatttggagaaatatagcattacatcatttgctcaccaatgaatcctctgcagtgaaaggagtccaaacagctgataaaaaaatacttaaaatactttaagGTGAAAATTAaggtgttttaaatttaaacccatccatttttacttcacaagatgGAGTGTTGTGGCTTGGTTGGGGACTATtacgtttttatcagctttttgaactctcattctgacggtacccattcactgcagagcatccactggtgagcaagcaaatgtataaatcttcaaccaattaaatttttttaggctattcttttaacagcttgcaaaatgtgtatataaCCTCATTCATTCACGTGTGTctcttttcaaataaagctTGTCACCATCAAATTCA

Function

symbol description
daw1 Acts upstream of or within axonemal dynein complex assembly; cilium-dependent cell motility; and determination of left/right symmetry. Predicted to be located in cilium. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; nervous system; neural tube; and solid lens vesicle. Orthologous to human DAW1 (dynein assembly factor with WD repeats 1).

NR:

description
dynein assembly factor with WDR repeat domains 1 isoform X1

GO:

id name namespace
GO:0070286 axonemal dynein complex assembly biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0060271 cilium assembly biological_process
GO:0060285 cilium-dependent cell motility biological_process
GO:0005929 cilium cellular_component

KEGG:

id description
K19760 DAW1; dynein assembly factor with WDR repeat domains 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU186247 False 1418 lncRNA 0.42 2 13670289 13706114
XM_043216801.1 True 2403 mRNA 0.43 14 13695123 13704727

Neighbor

gene id symbol gene type direction distance location
sertad3 sertad3,LOC107670600,LOC107717619 coding upstream 73075 13594302 ~ 13597214 (+)
blvrb blvrb,LOC107692505 coding upstream 76140 13591816 ~ 13594149 (+)
mmp23bb mmp23bb,LOC107758054,LOC107670598,LOC107672246,LOC107717605,LOC107576217,LOC108440601 coding upstream 144983 13519067 ~ 13525306 (+)
ap2m1b ap2m1b,ap2m1a,LOC107672017,LOC107602122,LOC108440593,LOC107593770,LOC107671693,LOC108264350 coding upstream 155594 13501705 ~ 13514695 (+)
LOC122322886 dvl3,LOC107575491,LOC107758060,LOC107671937,LOC107717599,LOC107670590,LOC106612406 coding upstream 171289 13471097 ~ 13499000 (+)
LOC122323172 LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107 coding downstream 163915 13870029 ~ 13873265 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding downstream 417282 14123396 ~ 14126844 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding downstream 424385 14130499 ~ 14147187 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding downstream 872056 14578170 ~ 14583254 (+)
fli1 fli1,LOC107692484,LOC107656981 coding downstream 998046 14704160 ~ 14727887 (+)
G126128 NA non-coding upstream 25529 13643398 ~ 13644760 (+)
G126098 NA non-coding upstream 126514 13543253 ~ 13543775 (+)
G125887 NA non-coding upstream 299508 13369713 ~ 13370781 (+)
G125886 NA non-coding upstream 300778 13367416 ~ 13369511 (+)
G125881 wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204 non-coding upstream 318559 13350491 ~ 13351730 (+)
G126139 NA non-coding downstream 103165 13809279 ~ 13840132 (+)
G126143 NA non-coding downstream 127530 13833644 ~ 13887497 (+)
G126178 NA non-coding downstream 209624 13915738 ~ 13917760 (+)
G126183 NA non-coding downstream 215732 13921846 ~ 13922131 (+)
G126184 NA non-coding downstream 216043 13922157 ~ 13922424 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other upstream 239524 13427044 ~ 13430765 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other upstream 448141 13216484 ~ 13222148 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other upstream 714344 12946841 ~ 12955945 (+)
napab napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256 other upstream 744821 12917226 ~ 12925468 (+)
G125836 NA other upstream 785677 12880588 ~ 12884612 (+)
lbhl lbhl other downstream 155757 13861871 ~ 13869332 (+)
G126175 NA other downstream 203450 13909564 ~ 13912800 (+)
G126146 gramd1bb other downstream 233981 13940095 ~ 13941369 (+)
gemin7 NA other downstream 1120674 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 1200502 14906616 ~ 14910157 (+)

Expression


Co-expression Network