LOC122362954 (LOC107740354)


Basic Information

Item Value
gene id LOC122362954
gene name LOC107740354
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 15950982 ~ 15953653 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU186953
GCGGCGGCATGCGGCGGTCTCCATCGACTGGGTCATGCAGGTTCAGAGAGAGTTCAGACTGTCACAGGAGACTCTCTTCATGACCGTCGGCATCATCGACCGCTTCCTTCAGaataacCCGGTGCCCAGGAAGTATTTGCAGCTGCTCTGTGTGACTGCGATGCTGCTGGCGTCTAAGTATGAGGAGCTCTACCCGCCCACGGTTGGAGACTTTGCGTTTGTGACGGATGGGGCATACAGCTGTGGAGACATCCGGAGGATGGAGAGAATTGTCTTAAAGCGCTTGAACTACAGCCTCGGCCGACCCCTTCCTTCTCACTTCCTGCAGAGGGTCTGTAAGATTGGACAGGCCGGTCCGAGGGAGCGCGAGCTGGCCTCCTTCCTGACGGAGCTGATGGTTCTGGACTATGATCTGGTCCATGTTCCTCCGTCTCTCAGCGCAGCGGCTGCGTTTCAGGCGTCTCGGACGATTCTGGGCTCGGGCTcgtggAGCGCGGGTCTGCAGCGGTACACCGGCTACAGCGAGCAGACGTTGGCTCCGGTGGTGCAGGCCGTCGTTCGGACGCTGGAGAGCGTTACTGACCGA
>XM_043264773.1
CGGTCGAGCCTCCTGCTCCACGCACCGACGTCTGTCAGGACCCGGGGCGTCTTCAGGAACCGCCTGACGCTCCTCAGATGTTCTCCATCCTGTTGCTCAACATCCCAGACGTGGACTCGGCGGACGCTGGAGATGCCCAGATGTGCAGTGAATACGTGTGTGACATCTACGCTTATTTACAGCAGCTCGAGGTAGCGATGGCCATCAGGCCGTGTCATCTGGAGGGTCAGGAGGTGGCGCGGCATGCGGCGGTCTCCATCGACTGGGTCATGCAGGTTCAGAGAGAGTTCAGACTGTCACAGGAGACTCTCTTCATGACCGTCGGCATCATCGACCGCTTCCTTCAGaataacCCGGTGCCCAGGAAGTATTTGCAGCTGCTCTGTGTGACTGCGATGCTGCTGGCGTCTAAGTATGAGGAGCTCTACCCGCCCACGGTTGGAGACTTTGCGTTTGTGACGGATGGGGCATACAGCTGTGGAGACATCCGGAGGATGGAGAGAATTGTCTTAAAGCGCTTGAACTACAGCCTCGGCCGACCCCTTCCTTCTCACTTCCTGCAGAGGGTCTGTAAGATTGGACAGGCCGGTCCGAGGGAGCGCGAGCTGGCCTCCTTCCTGACGGAGCTGATGGTTCTGGACTATGATCTGGTCCATGTTCCTCCGTCTCTCAGCGCAGCGGCTGCGTTTCAGGCGTCTCGGACGATTCTGGGCTCGGGCTcgtggGGAAGCGTGTGAAGTACTGAGAGTGATCCGCTGGCAGCAGAAGCTCGAGGTCTCATCTTGATAATGACCGTTTGGCAGAGCGCGGGTCTGCAGCGGTACACCGGCTACAGCGAGCAGACGTTGGCTCCGGTGGTGCAG

Function

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0051301 cell division biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186953 False 586 TUCP 0.60 4 15952019 15953653
XM_043264773.1 True 863 mRNA 0.59 7 15950982 15953617

Neighbor

gene id symbol gene type direction distance location
ubl7b LOC107668695,LOC107579017 coding upstream 136129 15810671 ~ 15814853 (+)
insyn1 LOC107692472,LOC107740352,LOC107656969,LOC107722291,LOC107581104 coding upstream 280825 15613403 ~ 15670157 (+)
scamp5b scamp5b,LOC107740350,LOC107722282,LOC107599784,LOC108430449 coding upstream 432065 15511535 ~ 15518917 (+)
mob2b mob2,mob2b,LOC107722284,LOC107656971,LOC108430083,LOC108264656 coding upstream 468285 15449341 ~ 15482697 (+)
dusp8b LOC107713871,LOC107692476,LOC107569904,LOC107599770 coding upstream 508851 15432956 ~ 15442131 (+)
zgc:158464 LOC107572397,LOC107740353,LOC107692470,LOC107599765,LOC107711356 coding downstream 2252 15955905 ~ 16038911 (+)
LOC122362746 cngb1a,LOC107670565,LOC107679572 coding downstream 110314 16063967 ~ 16075424 (+)
LOC122362951 cngb1a coding downstream 121818 16075471 ~ 16085414 (+)
LOC122362747 kifc3,LOC107670565 coding downstream 136437 16090090 ~ 16115844 (+)
LOC122323208 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding downstream 162338 16115991 ~ 16118762 (+)
G126605 NA non-coding upstream 122629 15825427 ~ 15828353 (+)
G126591 NA non-coding upstream 130652 15760963 ~ 15820330 (+)
G126458 NA non-coding upstream 884405 15066346 ~ 15066577 (+)
G126347 NA non-coding upstream 966234 14932321 ~ 14984748 (+)
G126345 ltbp4,LOC107724163,LOC107566282,LOC107692515 non-coding upstream 1013348 14936925 ~ 14937634 (+)
G126626 NA non-coding downstream 45799 15999452 ~ 16003818 (+)
LOC122362955 NA non-coding downstream 104881 16058534 ~ 16058974 (+)
G126711 pimr50,si:dkey-1p9.2,pimr51,LOC107716905,LOC107600734 non-coding downstream 254931 16208584 ~ 16211583 (+)
G126716 homer2,LOC107569981,LOC107703939,LOC107595365 non-coding downstream 313361 16267014 ~ 16364205 (+)
G126722 whamm,LOC107595364 non-coding downstream 401578 16355231 ~ 16361646 (+)
LOC122362588 NA other upstream 903089 15035383 ~ 15047893 (+)
LOC122322993 LOC107709552 other upstream 1040825 14906616 ~ 14910157 (+)
gemin7 NA other upstream 1122690 14826788 ~ 14828292 (+)
G126146 gramd1bb other upstream 2009613 13940095 ~ 13941369 (+)
G126175 NA other upstream 2038182 13909564 ~ 13912800 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other downstream 93416 16047069 ~ 16055627 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other downstream 310186 16263839 ~ 16271267 (+)
G126820 NA other downstream 800056 16753709 ~ 16818399 (+)
G126884 ctxn2 other downstream 1120541 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 1176269 17129922 ~ 17171335 (+)

Expression


Co-expression Network