LOC122362745 (si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274)


Basic Information

Item Value
gene id LOC122362745
gene name si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16047069 ~ 16055627 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187042
CTGACTGAGCCACTTGCTAAGATGTTCTGGTCAATTTTTAGGTGCATTTGGCTTCTTAGTCACAGGCAAAGATCCCGAGAGCTCCGCAGTGGGGAATTATGGGATTCTAGACCAGCAGGCAGCACTGCGCTGGGTCCAAGAAAACATAGCAGATTTTGGAGGAGACCCAAATAAGGTTACTCTGTTTAGCGAGAGCGCTGGTGCCCAATCAGTGTGTCTTCATCTGATGATGAGGAGCAGCGAGTCTTTGTTTAGACACGCAGCCATACAGAGTTTACCATTCTCTTTACCACTGAAAACCagATGGGATGCTGTGAAACTGGGCTGGGATTTTGCTAAACTGACTAATTGCTCAGCATTCGATCTGCCCTGTCTGCGCTCTCTCAGCTCACATGACGTGCTCAACGCCCAGGTTGAATCAGGTTCAAAGATCATCAACCCCTTCCGTTTCCTGGAGGTCTTTGAGACATGGGGGCCGTTCATTGATGGAGAACTGATCCGGgaacagccaatcacagcctTCCAAACAGGCCACTGGCAGAGTTACAAGCCTGTCATACTTGGTACAACCTCAGAGGAAGGGGTGACCTTTGTGTACAACATTTTCAACCGGTCCGTATCAACACTGGAATGTGTGCTCTATACTGCCGCCATCTTTAAGCAACATGCGCTTAAAATTCTGCACAAATACATTCCTTTCTACCGAGACCAGGACAGAAGAGTGATGCTTTCTCAAATCGTCACGGATTACATGTTTCTGTGTCCAACTCGATGTTCTGCTCGTTCTGGAGTAAAAGCCGGCGGAGCCGTTTGGTTGTATGTATTTGACCACGCTCCGTCCGATCACAACATATGGGAGGGGCTTCCGTTCTGCTACAATCATACCTGCCACGGGGCGGAGCTGCCCTTTCTCTTTGACTCCGCCCCCAGCACCAACTTCACACTTACGCCTGAAGAGACCCTTCTGGCAAATCGGATGGCGTGTTACTGGGGAACGTTCGCCCATACGGGGAACCCAAACTCTCGAAGCGAACAGACACACTTCTGCTCACAGCAGAGACTGCCTGTTTGGCCTCGGTACACGGCTTCAGAGGGCTGGCCCATCCTGAATCTGACTCTACCCTCACACCCACAGCACGGGGAC
>TU187043
GGTTACTCTGTTTAGCGAGAGCGCTGGTGCCCAATCAGTGTGTCTTCATCTGATGATGAGGAGCAGCGAGTCTTTGTTTAGACACGCAGCCATACAGAGTTTACCATTCTCTTTACCACTGAAAACCaggtaaaacacacataaatcatccaattactcaccctcactcAAGATCAAGAGTCTACGCTGGACATCATTTTGGATTaatgcagtgcattctgggattgcatTTTCTCTGAATAAacataatgttaatttttagaATCTCAGCAAGACAAGGTATCGAGTGTAATTCTGATTACCATCTGAATTGGTTGTAAAGCTATGCTATAAAGCCTTATCAGTTCAATATGTTTTGGAACTGAGCCTTAGCCTGTATAGAAGCTGCTGCTGAAGATGATGGTGCTTATTGTTTTGTAGATGGGATGCTGTGAAACTGGGCTGGGATTTTGCTAAACTGACTAATTGCTCAGCATTCGATCTGCCCTGTCTGCGCTCTCTCAGCTCACATGACGTGCTCAACGCCCAGGTTGAATCAGGTTCAAAGATCATCAACCCCTTCCGTTTCCTGGAGGTCTTTGAGACATGGGGGCCGTTCATTGATGGAGAACTGATCCGGgaacagccaatcacagcctTCCAAACAGGCCACTGGCAGAGTTACAAGCCTGTCATACTTGGTACAACCTCAGAGGAAGGGGTGACCTTTGTGTACAACATTTTCAACCGGTCCGTATCAACACTGGAATGTGTGCTCTATACTGCCGCCATCTTTAAGCAACATGCGCTTAAAATTCTGCACAAATACATTCCTTTCTACCGAGACCAGGACAGAAGAGTGATGCTTTCTCAAATCGTCACGGATTACATGTTTCTGTGTCCAACTCGATGTTCTGCTCGTTCTGGAGTAAAAGCCGGCGGAGCCGTTTGGTTGTATGTATTTGACCACGCTCCGTCCGATCACAACATATGGGAGGGGCTTCCGTTCTGCTACAATCATACCTGCCACGGGGCGGAGCTGCCCTTTCTCTTTGACTCCGCCCCCAGCACCAACTTCACACTTACGCCTGAAGAGACCCTTCTGGCAAATCGGATGGCGTGTTACTGGGGAACGTTCGCCCATACGGGGAACCCAAACTCTCGAAGCGAACAGACACACTTCTGCTCACAGCAGAGACTGCCTGTTTGGCCTCGGTACACGGCTTCAGAGGGCTGGCCCATCCTGAATCTGACTCTACCCTCACACCCACAGCACGGGGAC
>XM_043264306.1
ttttctctctctctttctctctctctctctcacacacacagaagataGAAAATGAGTGAGGATGTATATGAGGTCCCCGAGGGGACGGAGTATCGTTATCTGGTGCAGGACGAAGAAGAGGAGCAGATACAGTACGTCCGTCGCCACTATGTCAGTCCATTCCTGGTGGTGTCGCGCAAGTGCATGTTCCTCATCGGCTGTGGCGTGATCGCTCTCCTCTCTCTCGCGGGATACCTGGCTTATGTGGCTGAGACTCCTCCTCCAAGGGTGGCAGAGGTGCAGACCGAGTGCGGTCGGCTGCGAGGGAGCTGGAAAGGCGGAGCTTATTCCTTTAAAGGCATCCCATACGCAGTGCCGCCGGTGGGTGAGCGTCGCTGGCGACCCCCGGCGGACCTATTTAAGGCGGGACAGTGTTGGCGGGGCGTTTACGACGCCACTCGATTCCGTAGCATCTGTGCGCAAGTGCAGCCCCTCCGAAAAGACGGACAGGTCATGGGACAGGAGGACTGTCTGCATCTCAGCGTCTGGACGCCGAGCCTAAAGCCCGCCAAACCACTTCCAGTCATGGTGTGGATCCACGGAGGGTACCTGCACATGCTGAGCGGCCAGGAGAAAGGATACTCGCCCACCGAAGAGCTGGCGGCCCGCACGCAGATGGTGTACGTCAGTCTGAATTACAGGCTCAATGCTTTCGGCTTCATGGCTCTGGAGATGCTCAGGGAAGGCTCTCCCACCAACTCCTCAGGGAACTATGGCTTCATGGACCAGATCCAAGCACTTCAGTGGGTCCAGAGAAATATCCATGACTTCGGTGGCGATGCTGGAAGGGTTACCATATTTGGTCAAAGCTCAGGAGGAACTTCAGTTTGGACTTTGATGATGTCTCCACTAGCCAAAGGACTCTTTCATCGCGCGATAGACATGAGCGGCTCATATGTGTACAACGCCTCTCTGGAGTCAGCAGAAAGAGACAACTTAGAATTCCTGAGAAGAACCGGCTGCAAGAACGCCATCTGCCTGAGAGATCTACACATCGCTCAAGTCCTTCAGGCAATCCCGTGGCAGCAGTACCCAGCATGGGCGGCCGATGAAATAATCGATCTTCCGGTCAAAGGTGTTTTTATTGGCCCAGTGGCAGTCGTTGACAACTATGTTCTCAAAGCTCCTCCGTTCGAGACCTGGGAGAAGGGTGTAGCCGGAACCTATAACGACGTCCCGTTTGTGGTTGGAACAACCGAACAGGAGACAGATTTTGCCTCCGCCTCCAAACCTCTATATGACGGCCGCTTCATCAGTAACTATAGCAACACAGTAGTTGTCAACATGGAGTATCGTCTTGGTGCATTTGGCTTCTTAGTCACAGGCAAAGATCCCGAGAGCTCCGCAGTGGGGAATTATGGGATTCTAGACCAGCAGGCAGCACTGCGCTGGGTCCAAGAAAACATAGCAGATTTTGGAGGAGACCCAAATAAGGTTACTCTGTTTAGCGAGAGCGCTGGTGCCCAATCAGTGTGTCTTCATCTGATGATGAGGAGCAGCGAGTCTTTGTTTAGACACGCAGCCATACAGAGTTTACCATTCTCTTTACCACTGAAAACCagATGGGATGCTGTGAAACTGGGCTGGGATTTTGCTAAACTGACTAATTGCTCAGCATTCGATCTGCCCTGTCTGCGCTCTCTCAGCTCACATGACGTGCTCAACGCCCAGGTTGAATCAGGTTCAAAGATCATCAACCCCTTCCGTTTCCTGGAGGTCTTTGAGACATGGGGGCCGTTCATTGATGGAGAACTGATCCGGgaacagccaatcacagcctTCCAAACAGGCCACTGGCAGAGTTACAAGCCTGTCATACTTGGTACAACCTCAGAGGAAGGGGTGACCTTTGTGTACAACATTTTCAACCGGTCCGTATCAACACTGGAATGTGTGCTCTATACTGCCGCCATCTTTAAGCAACATGCGCTTAAAATTCTGCACAAATACATTCCTTTCTACCGAGACCAGGACAGAAGAGTGATGCTTTCTCAAATCGTCACGGATTACATGTTTCTGTGTCCAACTCGATGTTCTGCTCGTTCTGGAGTAAAAGCCGGCGGAGCCGTTTGGTTGTATGTATTTGACCACGCTCCGTCCGATCACAACATATGGGAGGGGCTTCCGTTCTGCTACAATCATACCTGCCACGGGGCGGAGCTGCCCTTTCTCTTTGACTCCGCCCCCAGCACCAACTTCACACTTACGCCTGAAGAGACCCTTCTGGCAAATCGGATGGCGTGTTACTGGGGAACGTTCGCCCATACGGGGAACCCAAACTCTCGAAGCGAACAGACACACTTCTGCTCACAGCAGAGACTGCCTGTTTGGCCTCGGTACACGGCTTCAGAGGGCTGGCCCATCCTGAATCTGACTCTACCCTCACACCCACAGCACGGGGAC

Function

symbol description
si:dkey-30c15.17 Predicted to enable carboxylic ester hydrolase activity; mannosyl-oligosaccharide mannosidase activity; and phospholipase activity.
si:ch211-71n6.4 Predicted to enable carboxylic ester hydrolase activity; mannosyl-oligosaccharide mannosidase activity; and phospholipase activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: cAMP-regulated D2 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187042 False 1144 TUCP 0.51 6 16052878 16055627
TU187043 False 1261 TUCP 0.48 4 16053129 16055627
XM_043264306.1 True 2442 mRNA 0.53 11 16047069 16055627

Neighbor

gene id symbol gene type direction distance location
zgc:158464 LOC107572397,LOC107740353,LOC107692470,LOC107599765,LOC107711356 coding upstream 8158 15955905 ~ 16038911 (+)
ubl7b LOC107668695,LOC107579017 coding upstream 232216 15810671 ~ 15814853 (+)
insyn1 LOC107692472,LOC107740352,LOC107656969,LOC107722291,LOC107581104 coding upstream 376912 15613403 ~ 15670157 (+)
scamp5b scamp5b,LOC107740350,LOC107722282,LOC107599784,LOC108430449 coding upstream 528152 15511535 ~ 15518917 (+)
mob2b mob2,mob2b,LOC107722284,LOC107656971,LOC108430083,LOC108264656 coding upstream 564372 15449341 ~ 15482697 (+)
LOC122362746 cngb1a,LOC107670565,LOC107679572 coding downstream 8340 16063967 ~ 16075424 (+)
LOC122362951 cngb1a coding downstream 19844 16075471 ~ 16085414 (+)
LOC122362747 kifc3,LOC107670565 coding downstream 34463 16090090 ~ 16115844 (+)
LOC122323208 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding downstream 60364 16115991 ~ 16118762 (+)
hdgfl3 LOC107726337,LOC107595369,LOC107665298,LOC107703942,LOC107754858 coding downstream 274082 16329709 ~ 16334460 (+)
G126626 NA non-coding upstream 43251 15999452 ~ 16003818 (+)
G126605 NA non-coding upstream 218716 15825427 ~ 15828353 (+)
G126591 NA non-coding upstream 226739 15760963 ~ 15820330 (+)
G126458 NA non-coding upstream 980492 15066346 ~ 15066577 (+)
G126347 NA non-coding upstream 1062321 14932321 ~ 14984748 (+)
LOC122362955 NA non-coding downstream 2907 16058534 ~ 16058974 (+)
G126711 pimr50,si:dkey-1p9.2,pimr51,LOC107716905,LOC107600734 non-coding downstream 152957 16208584 ~ 16211583 (+)
G126716 homer2,LOC107569981,LOC107703939,LOC107595365 non-coding downstream 211387 16267014 ~ 16364205 (+)
G126722 whamm,LOC107595364 non-coding downstream 299604 16355231 ~ 16361646 (+)
LOC122362848 NA non-coding downstream 320811 16376438 ~ 16378666 (+)
LOC122362954 LOC107740354 other upstream 93416 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 999176 15035383 ~ 15047893 (+)
LOC122322993 LOC107709552 other upstream 1136912 14906616 ~ 14910157 (+)
gemin7 NA other upstream 1218777 14826788 ~ 14828292 (+)
G126146 gramd1bb other upstream 2105700 13940095 ~ 13941369 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other downstream 208212 16263839 ~ 16271267 (+)
G126820 NA other downstream 698082 16753709 ~ 16818399 (+)
G126884 ctxn2 other downstream 1018567 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 1074295 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 1248142 17303769 ~ 17309158 (+)

Expression


Co-expression Network