G127780


Basic Information

Item Value
gene id G127780
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20256712 ~ 20281295 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188698
tttttttttttttttttttttttttttttattttaGCACAGCCAAAATTTTATTAACCTAAAATTGGCATACACTGATATAACATTcaacatttgcatattcatgtAGGCCTAGTCAGAAGCTTTcttttgatttgtatttgtatctgtaatgcatattgtttatttttttatttctgactCATTTCAGGTCATTTTACACGTCATTAATAACAAATGCTCACGCATACACATTCACAATTATACACACTCTTACATACACTCCTATTACTGTatttgtcattgtattcttctgctttatactgttcagtgctttgatgcaacctgtgttgttaaaagcgctatataaataaaaatgattgattgattgattactgTCCTCCACCAGCAGCATCAAACATCTTCTTCCTGCCCTCCATACCAGACATAGCCTCGACGTTCTTACGCCAGTCGCCCACCTCCGTCGACATAACCTGACGAAACAGAAATCAAGTGTGCAGTTACTG

Function

GO:

id name namespace
GO:0061061 muscle structure development biological_process
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188698 True 505 lncRNA 0.34 2 20256712 20281295

Neighbor

gene id symbol gene type direction distance location
fkbp4 fkbp4,LOC107686573,LOC107705800,LOC107564896,LOC107662895,LOC107735478 coding upstream 265 20250402 ~ 20256447 (+)
wash1 wash1,LOC107564895,LOC107686618,LOC107662897 coding upstream 17911 20230154 ~ 20238801 (+)
ptprq ptprq,LOC107705767,LOC107662847,LOC107564908,LOC107564907,LOC108413201,LOC107683214 coding upstream 58897 20160121 ~ 20197815 (+)
LOC122362491 LOC107736106 coding upstream 96534 20155466 ~ 20160178 (+)
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding upstream 102260 20121656 ~ 20154452 (+)
c2cd5 c2cd5,LOC107686569 coding downstream 5170 20286465 ~ 20311133 (+)
lmf2a lmf2a,LOC107564898,LOC107686567,LOC107600131,LOC107662891,LOC107735523,LOC107705770 coding downstream 30484 20311779 ~ 20321200 (+)
dnaja2b dnaja2l,dnaja2,LOC107735561,LOC107705812,LOC107686561,LOC108438176,LOC103026191 coding downstream 83436 20364731 ~ 20371597 (+)
LOC122363067 LOC107559703,LOC107686559,LOC107662909,LOC107576256 coding downstream 132721 20414016 ~ 20422329 (+)
si:dkey-88e18.2 LOC107686617,LOC107733267,LOC107560122 coding downstream 158849 20440144 ~ 20445367 (+)
LOC122363139 NA non-coding upstream 32128 20221304 ~ 20224584 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding upstream 41481 20202748 ~ 20215231 (+)
G127663 NA non-coding upstream 265076 19985741 ~ 19991636 (+)
G127637 golim4,LOC107662907 non-coding upstream 331910 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 630191 19626153 ~ 19626521 (+)
G127785 NA non-coding downstream 44035 20325330 ~ 20383758 (+)
G127800 NA non-coding downstream 92559 20373854 ~ 20375835 (+)
G127860 NA non-coding downstream 280788 20562083 ~ 20572310 (+)
G127873 LOC107686547,LOC107710394,LOC107559637,LOC107600002,LOC107662879,LOC107735654 non-coding downstream 304756 20586051 ~ 20588863 (+)
LOC122363025 NA non-coding downstream 360470 20641765 ~ 20647708 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 163111 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 241006 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 968156 19269611 ~ 19288556 (+)
G127500 NA other upstream 1415177 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1604548 18646362 ~ 18652164 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 264697 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 269853 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 308389 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 353550 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 2119649 22400944 ~ 22411957 (+)

Expression


Co-expression Network