G128462


Basic Information

Item Value
gene id G128462
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23005958 ~ 23006443 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU189608
gtaaaatgtacaatatttacggccttatgatttattttattacatatattatctacatatatattatacattataacatatattataagTACATTTAACTTGATGATGTATTGTGGTGCATTcacttattttctgtttaagcaatttttttcattttagcttacatttagaaacatgacaaaaaaaatatttgataactTTATGAAGACTTAACAGTATCTGAAATGCCAAACGTAGGGGTTATAGCTGTGGGTAACCTTAACGTTATTTAAGAAGAATATAACGGTTAGTGACTagttagatgtgtgtgtgtggatactGACCTGGCTATGCACAGTGTTAAGCTGGTTGTTGAAGGTCATGGTGAGATTGGTGGAGGTGCTGGGGGCTACATGTGTTATAAAGGGTGTCTTGCTCTGATTAACTGTATCGTACATGTTCACCCGACGCTTGCAAATCTCCATGTTCTGGAAGCAGGATTTgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189608 True 486 lncRNA 0.34 1 23005958 23006443

Neighbor

gene id symbol gene type direction distance location
fgd4a LOC107722468,LOC107670369,LOC107587027,LOC107684651,LOC107738409 coding upstream 116458 22849926 ~ 22889500 (+)
bicd1a bicd1,LOC107722484,LOC107738411,LOC107587026 coding upstream 156915 22817357 ~ 22849043 (+)
tmtc2b LOC107673141,LOC107722480,LOC107670376,LOC107738412,LOC107587029,LOC108414015 coding upstream 243416 22668197 ~ 22762542 (+)
LOC122362983 hipk2,LOC107722467,LOC107568633,LOC107738404 coding upstream 369093 22623124 ~ 22636865 (+)
LOC122362807 srgap1a,srgap1,LOC107670373,LOC108264626 coding upstream 383770 22583917 ~ 22622188 (+)
tbxas1 tbxas1,LOC107722474,LOC107684653,LOC107587020,LOC107738402,LOC107559817 coding downstream 74584 23081027 ~ 23140905 (+)
LOC122323065 LOC107559809,LOC107684685,LOC101063805,LOC104959708,LOC102203720,LOC107587043 coding downstream 235030 23241473 ~ 23242712 (+)
LOC122362508 LOC107559815,LOC107722485,LOC107684656,LOC107666231,LOC107738399 coding downstream 238094 23244537 ~ 23250136 (+)
tat tat,LOC107666226,LOC107559814,LOC107587016,LOC107684657 coding downstream 244432 23250875 ~ 23258449 (+)
zgc:56622 zgc:56622,LOC107666229,LOC107738396,LOC107587047,LOC107722465,LOC107559805 coding downstream 255915 23262358 ~ 23266125 (+)
G128459 NA non-coding upstream 1831 23003669 ~ 23004127 (+)
G128458 NA non-coding upstream 3303 23002435 ~ 23002655 (+)
G128454 NA non-coding upstream 4325 22997764 ~ 23001633 (+)
G128453 NA non-coding upstream 9927 22995751 ~ 22996031 (+)
G128451 LOC107722467,LOC107568633,LOC107587022,LOC107738404 non-coding upstream 11617 22994098 ~ 22994341 (+)
G128467 hipk2,LOC107722467,LOC107568633,LOC107587022,LOC107684678 non-coding downstream 46959 23053402 ~ 23054529 (+)
G128469 NA non-coding downstream 50577 23057020 ~ 23057222 (+)
G128470 NA non-coding downstream 50944 23057387 ~ 23059941 (+)
G128475 NA non-coding downstream 60369 23066812 ~ 23067068 (+)
G128476 NA non-coding downstream 61867 23068310 ~ 23080310 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 567279 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 594001 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 2364899 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 2405439 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 2449331 20551148 ~ 20556627 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 450657 23457100 ~ 23736848 (+)
G128858 NA other downstream 1443322 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 1577402 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 2288300 25294743 ~ 25309740 (+)
mt2 NA other downstream 2339949 25346392 ~ 25348594 (+)

Expression


Co-expression Network