G128854


Basic Information

Item Value
gene id G128854
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24431168 ~ 24431809 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU190166
tgtaaattgtagcttgtgtaaaataattttaatacttcaaaTTAAAGTTATAAGATGGCACAAGAATCTGATTCattattttggtattttgaACCCAATAGgctaatcaaatttaaaatattacagttttgttttttttgtcctttgatTATACATAACAACTTAAAGTGGCGAGACTGAGActaatatttaatcaataacTGATTTCTCAGTAGAAGTTTTTATGTTTGGCAGTACAATATTGACATACGATTCTGAAAATATCCTAATTATTTACAGCAGCTGTTTAGATTTACTTTGTAAATTCACATAACAagatacataattaaaataaaataaatagtaaataaataactaatgatCTGAAGTGTGTTCAAGTGTAATTTcagcaaatattcattttgtggataactattgcttttatttaaaatattcatccTGATAAATTCATGAACTTATCATATTTAAGGCCCCGTCACGATAAATACTGTAACAGTCATGATCTCCTCCACAGCTTCACAGCACTGCACTGCCTTTGAGAGGCCTCTCCATCTTCACTGTGTTTGGATCACACTCCAACATCTCTCTGATCCATTCGTCATTCAGCGCGCCTTCAATGAACTCCTCCTGACTGATAATGGc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190166 True 642 lncRNA 0.31 1 24431168 24431809

Neighbor

gene id symbol gene type direction distance location
si:dkey-103i16.6 si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161 coding upstream 81011 24338891 ~ 24350157 (+)
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding upstream 116188 24308176 ~ 24314980 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding upstream 139709 24287138 ~ 24291459 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding upstream 144393 24277282 ~ 24286775 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding upstream 249626 24134413 ~ 24181542 (+)
slc17a8 slc17a8,LOC107553956,LOC107672209,LOC107686235,LOC107583818 coding downstream 29107 24460916 ~ 24472951 (+)
nr1h4 nr1h4,LOC107749275,LOC107686236,LOC107672305,LOC107740216 coding downstream 42428 24474237 ~ 24488921 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding downstream 62124 24493933 ~ 24502864 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding downstream 80323 24512132 ~ 24522487 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding downstream 95402 24527211 ~ 24534508 (+)
G128816 NA non-coding upstream 48456 24345200 ~ 24382712 (+)
G128804 NA non-coding upstream 133323 24297609 ~ 24297845 (+)
G128803 NA non-coding upstream 133835 24297109 ~ 24297333 (+)
G128772 NA non-coding upstream 365065 24058353 ~ 24066103 (+)
G128770 NA non-coding upstream 367897 24056720 ~ 24063271 (+)
LOC122363046 NA non-coding downstream 1782 24433591 ~ 24446100 (+)
G128855 NA non-coding downstream 3265 24435074 ~ 24435380 (+)
G128841 NA non-coding downstream 4229 24436038 ~ 24440532 (+)
G128856 NA non-coding downstream 10564 24442373 ~ 24443159 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding downstream 12693 24444502 ~ 24445199 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 694320 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1992489 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2019211 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3790109 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3830649 20589684 ~ 20600519 (+)
G128858 NA other downstream 17956 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 152036 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 862934 25294743 ~ 25309740 (+)
mt2 NA other downstream 914583 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1489458 25921267 ~ 26174156 (+)

Expression


Co-expression Network