LOC122322887 (si:dkey-47k20.3,LOC107569155,LOC107741380,LOC107676312,LOC107697634,LOC107741381,LOC107557170,LOC107748085,LOC107676311,LOC107748086)


Basic Information

Item Value
gene id LOC122322887
gene name si:dkey-47k20.3,LOC107569155,LOC107741380,LOC107676312,LOC107697634,LOC107741381,LOC107557170,LOC107748085,LOC107676311,LOC107748086
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5911025 ~ 5914442 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216486.1
ATGTGGACCTCTCTAATCATCTGCCTGTATCTTtcctttaaatttatttatgcagCTTCAGTCCTTCAATCAGGTACCTGTCAGCTTCAGGGACGCTTCAGGTTGAATGGAATGTACCAGGCTGGAGATGTTATACTCGGAGGCCTGTTTGAGGTTCACTTCCTCACAGTGTTTCCAGAGCTGAGCTTTAGAACAGAGCCAAAGCCGCCGTACTGTGAGCAATTTGATATGGCAAGCTTCCAGCAGGCACAAACCATGGTTTTTGCTATAGATGAAATCAATAAGAATCCAAGCTTGCTGCCTAACATCACTCTTGGTTACCATCTTTATGACAACTGTGTGATGCTAGGAATGGCATTCCGGGCTGCTTTATCCCTAGTTAGTGGAACAGAGGAGTACTTCTCCAACCTAAACTGCACTGGCCCTCCTCCAGTGATTGGGATTGTTGGGGATTCAAATTCCACTCCTTCCATCGCAATTTCCAGTGTTCTGGGGTTGTTTCGAGTACCTATAGTTAGCTACTTTGCCACCTGTTCCTGTTTgagtaacagaaaaaaatacccCTCTTTCTTCAGAACAATCCCCAGTGATGCCTTCCAAGTGAGGGCAATGATCaggattttaaaacattttggatgGACCTGGTTTGGTCTTGTCTACAGTGATGATGACTACGGCAACCACGCTGCTCAATCCTTCCTCCAGGATGTGCAGGTGTTTGGAGGGTGTGTTGCTTTTTCTGAAATCTTGCCTCTAGATAACAACCGCAAAGATATTCAGCATATAGTGGGAGTGATACAATCCTCTACAGCGAGAGTGGTGGTGGTGTTCTCCACTTCAACATATGTGTTGGCTTTGATGGATGAAGTGGTGTTGCAGAATGTAACAGACAGACAATGGATTGCAAGTGAAGCCTGGGCTACTTCACCTGTATTTCACACTCAGCGTCTTTTGCCCTTTCTAGGGGGCACACTGGGCATAGCCATTAGGCGTGGAGAAATCCAAGGACTTCATGAATTTCTACTACTTCTCCGTCCTAATAATGATCAAAGAAACAATATGGTGAGAATCTTCTGGGAGAACATGTTTAAGTGCAGGTTTAACATtggagaaagaggagaaaaaatgTGTTCAGGGCAAGAAGATCTGAGCAACACAGATACATCATATACTGATGTTTCACAGCTGAGGGCCTCATATAATGTGTATAAAACAGTTTATGCACTGGCACATGCACTTCATGACCTGATGCAGTGTGAGGAGGGGAGAGGGCCATTCAGTGGGAAAAGCTGTGCTGATATAACCAACTTACAGCCCTGGCAACTGGTTCACTATCTACAGAAAGTGAACTTCACCACAGGCTTTGGGGATCATGTGTCATTTGATGAGAATGGAGATGCTCTGGCCATCTATGATGTGATGAACTGGCAGCCGAGCTCTGATGGATCAATCGTTGTCCACACAGTTGGTGTGGTGAATGAAGGGGCGACAACAGGAAAAGTGCTCACACTGAATGAGGAAGCAATATATTGGAACTttgagacaaaaaaaCCCCCAAGGTCTGTGTGCAGTGAGAGCTGCCCCCCAGGAACCAGACGTGCCAGGAGGAAGGGTCTTCCTGTCTGCTGCTTTGATTGCCTACCATGTGCAGATGGAGAAATCTCGAATACAACTGATGCTAATGAGTGTACAATATGTCCAGATGATTTCTGGTCCAACCCAGTTAAAGACAGGTGTATTCCTAAAGAAGAAGAGTTTTTATCCTATGAGGATCCACTGGGCATCTCTCTGACCACTGCTTCCCTCCTTGGCACCTGCTTCTGTGGTCTTGTGATGGTCATCTTTGCTCATCACCGTAACACTCCTATAGTACGAGCCAACAATTCAGAGCTCAGCTTTCTGCTGCTGTTGTCActcaaactgtgttttttatgtGTGCTGCTGTTCATTGGCCGGCCTCAATTGTGGACATGTCAGTTAAGACATGCTGTGTTTGGTATAAGTTTTGTCCTGTGCATCTCCAGCATCCTGGTCAAGACTATGGTAGTAATAGCTGTGTTCAAGTCATCTCGACCAGAGGGTAAAGACGCAATGAAATGGTTTGGAGCAGCTCAACAAAGAAGCACAGTTCTGGTCCTAACAGCTCTCCAGGTAGCAATATGCATTGTCTGGCTATCAAATGCTTCTCCAACACCACATAAAAACAGCCAGTATGTCAGCTCTAAAATAGTATATGAATGTGCTATAGGATCAGTGGCTGGGTTTGCAGTGCTTCTGGGCTACATTGGCTTCCTAGCAGCATTAAGTTTCCTGTTAGCCTTCCTGGCAAGGAATCTTCCAGATCATTTTAATGAAGCAAAGTTCATCACTTTTAGTATGTTGATCTTCTGTGCTGTATGGATTGCGTTTGTTCCAGCATATGTGAGTTCTCCAGGGAAATATTCAGTGGCTGTAGAGATATTTGCCATTCTAGCTTCTAGTTTTGGATTACTGGTAGCCATATTTGTCCCAAAGTGCTACATCATACTTTTACAtccagagaaaaacacaaaaaaaaacataatgggaagagaaacacaaaagaagtaG

Function

NR:

description
PREDICTED: extracellular calcium-sensing receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216486.1 True 2589 mRNA 0.44 6 5911025 5914442

Neighbor

gene id symbol gene type direction distance location
LOC122362979 si:dkey-47k20.2,LOC107676311,LOC107569153,LOC107741377,LOC107697634,LOC107741381,LOC107557170,LOC107569155,LOC107569150,LOC107748086 coding upstream 5110 5902171 ~ 5905915 (+)
LOC122362980 si:dkey-47k20.1,LOC107569154,LOC107676314,LOC107676311,LOC107569153,LOC107741377,LOC107697634,LOC107741381,LOC107557170 coding upstream 10257 5734427 ~ 5900768 (+)
LOC122322960 si:dkey-47k20.1,LOC107569154,LOC107676314,LOC107568278,LOC107703386,LOC107712093,LOC107715176,LOC107703357,LOC107569155 coding upstream 177997 5729552 ~ 5733028 (+)
LOC122322885 v2rh1,LOC107557170,LOC107703386,LOC107748085,LOC107568278,LOC107712093,LOC107569154,LOC107676314,LOC107569152,LOC107697635 coding upstream 194762 5712494 ~ 5716263 (+)
LOC122362590 LOC107707880,LOC107557166,LOC107671069,LOC107557170,LOC107748085,LOC107748086,LOC107557168,LOC107741383 coding upstream 205434 5701268 ~ 5705591 (+)
LOC122322966 NA coding downstream 5243 5919685 ~ 5920943 (+)
LOC122323201 LOC107557170,LOC107748085,LOC107741381,LOC107748086,LOC107697634,LOC107557168,LOC107741383,LOC107569151,LOC107707880,LOC107569150 coding downstream 6849 5921291 ~ 5924563 (+)
LOC122323198 LOC107741381,LOC107697634,LOC107569150,LOC107557170,LOC107748085,LOC107697635,LOC107569152,LOC107557168,LOC107748086 coding downstream 13964 5928406 ~ 5932318 (+)
LOC122323199 LOC107569152,LOC107697635,LOC107557170,LOC107741381,LOC107748085,LOC107697634,LOC107569150,LOC107569151,LOC107741383 coding downstream 25509 5939951 ~ 5943398 (+)
LOC122323197 LOC107569152,LOC107697635,LOC107557170,LOC107741381,LOC107697634,LOC107748085,LOC107569150,LOC107557168,LOC107748086,LOC107741383 coding downstream 39808 5954250 ~ 5958173 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding upstream 250792 5659906 ~ 5660233 (+)
G124595 NA non-coding upstream 556045 5354713 ~ 5354980 (+)
G124544 NA non-coding upstream 727488 5011405 ~ 5183537 (+)
G124547 NA non-coding upstream 853187 5056750 ~ 5057838 (+)
G124533 NA non-coding upstream 1002856 4903768 ~ 4908169 (+)
G124672 NA non-coding downstream 106799 6021241 ~ 6021636 (+)
G124673 NA non-coding downstream 109217 6023659 ~ 6023991 (+)
G124703 NA non-coding downstream 313039 6227481 ~ 6230584 (+)
LOC122362614 NA non-coding downstream 376080 6290522 ~ 6290901 (+)
G124711 NA non-coding downstream 381488 6295930 ~ 6296436 (+)
G124612 v2ra17,LOC107568349,LOC107568268,LOC107703349,LOC107695207,LOC107722082,LOC105904790,LOC107695201 other upstream 281372 5623453 ~ 5629653 (+)
LOC122323196 v2ra17,v2ra16,LOC107695207,LOC107568277,LOC107716837,LOC107695208,LOC107568268,LOC107568349 other upstream 286048 5619470 ~ 5624977 (+)
LOC122363125 LOC107702192,LOC107742943,LOC107564270,LOC107557162,LOC107702193,LOC107742944,LOC107748627,LOC107671076,LOC107748628,LOC107564269,LOC107702194,LOC107671077,LOC107557163 other upstream 415232 5492237 ~ 5495793 (+)
G124598 NA other upstream 515713 5394895 ~ 5395312 (+)
G124580 NA other upstream 681079 5228563 ~ 5229946 (+)
G124661 NA other downstream 61768 5976210 ~ 5979282 (+)
LOC122362599 LOC107557170,LOC107748085,LOC107741383,LOC107569151,LOC107741381,LOC107697634,LOC107697635,LOC107568278,LOC107712093,LOC107671063,LOC107569152 other downstream 106107 6020549 ~ 6029121 (+)
G124707 NA other downstream 377049 6291491 ~ 6291925 (+)
G124727 LOC107750410,LOC107695433,LOC107548924,LOC107739781,LOC107739761,LOC107564274,LOC107702188,LOC107728083,LOC107739792 other downstream 624805 6539247 ~ 6540907 (+)
G124881 LOC102215562 other downstream 1111876 7026318 ~ 7027135 (+)

Expression


Co-expression Network