LOC122322910


Basic Information

Item Value
gene id LOC122322910
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 207287 ~ 208126 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216508.1
ATGAATAACTTTACAGTGAACTTCACCATACCTGAAACATCTACAAACTGCACGACTCAGTGCATTGGACTAATGGACTGTGTGGAAATTGGTGTATACAGCATCAGTTTTCTGTTTGGTTTTCCTACACACGCCTATGTTATATGGCTCATTGTAAAAGAATCAGGAGTTACAACCGAGTTCTTCAACCTCAATCTTTCTGTTTGTGAGATTATTAATCGTCTGAATAGTTTGGTCTCTATACTATCAATTTGCTTTGCAAATCTTACAATAATACCATTGGTTTTACAAGGGCTAGTCTTCACGGGTTGTTCGCTGTTTCAGagtctgatctgtgttgagcgttacctggcagTGGTTCATCCTATAACCTTTCTGAAGttcaaacctctcagatatagaGTGATCTGCAGCGTTGTGTGCTGGATAATCACTCTTGGCTCCTGTTTGTGCTGCATGTTGATTGTGTTATCGCTAAAAATTCATGCATATACATGGTTCTTCTCGCAACAGttccttctcttcttctccatccagttgttttgtctcgtggctgttctaagagctctgaagcagtcaggaccagggaagagattgagagagagaaacgaagaaaaccacatgaagagaagagctttTTATATCATTCTAATAACTACTGGAAGCATGACTATTATGCACGTCCCATTTACTATCACAGGATTTCTGACCTTTCTGACACGACAGAACATTCATGTGCTTTGGAACATAGGTTTAACTTTTTATGtactggctggttttgttcagcctgtcCTTTATCTGCACCGAACTGGAAAATTCTCCTACCTCTGTTATTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216508.1 True 840 mRNA 0.40 1 207287 208126

Neighbor

gene id symbol gene type direction distance location
LOC122322909 NA coding upstream 1686 204768 ~ 205601 (+)
LOC122362472 si:ch211-234p18.3,rasgrf1,LOC107690363,LOC107691143,LOC107709805,LOC100708145,LOC102298753 coding downstream 125357 333483 ~ 354885 (+)
cfap45 cfap45,LOC107758640,LOC107549265,LOC107717174,LOC107596892 coding downstream 164016 372142 ~ 383071 (+)
tbrg1 tbrg1,LOC107549267,LOC107669777,LOC107717176,LOC107676756 coding downstream 177338 385464 ~ 393966 (+)
c18h19orf54 LOC107549270,LOC107748228,LOC107669776 coding downstream 238575 446701 ~ 451209 (+)
rasgrp4 rasgrp4,LOC107758090,LOC107676755,LOC107662146,LOC107758237 coding downstream 340691 548817 ~ 566665 (+)
G123257 NA non-coding downstream 153267 361393 ~ 363036 (+)
G123282 LOC107676751,LOC107758351 non-coding downstream 255978 464104 ~ 476401 (+)
G123301 ryr1b,LOC107676751,LOC107596888,LOC107758351 non-coding downstream 303172 511298 ~ 512632 (+)
G123312 NA non-coding downstream 321272 529398 ~ 529619 (+)
G123422 map3k10,LOC107560156,LOC107554498,LOC107758231,LOC107668271,LOC107756783 non-coding downstream 642527 850653 ~ 919977 (+)
G123243 NA other upstream 98455 108369 ~ 108832 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other downstream 606625 814751 ~ 823675 (+)
tmem123 NA other downstream 837068 1045194 ~ 1054735 (+)
G123568 NA other downstream 1357300 1565426 ~ 1571931 (+)
G123664 NA other downstream 1793660 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 1999073 2207199 ~ 2240260 (+)

Expression


Co-expression Network