znf296 (LOC107657474,LOC107554501,LOC107757154,LOC107758245,LOC107662139,LOC107560153)


Basic Information

Item Value
gene id znf296
gene name LOC107657474,LOC107554501,LOC107757154,LOC107758245,LOC107662139,LOC107560153
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 824825 ~ 835350 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216652.1
gtGGGCCAGCAGACAGTGTGAACTTGAACACTGACGGGCACAGCACTGAACGACAGTCGAGACGCACATCCCTGCCGTTTTATGAGATTCATAACGTCAGCGTCCGCTTAGTCCTGGTGTAGTTTTAGAGGATCTTCTCTCGCTATGTCCAGACGTAAACTCGGCAGCAGACCGCAACACCTGAGCGCTATGCAAGACGCTCCGGATTCCACAGCCATCCCCGCCGACTCTTCGCCGTCGCCCGAGCAGGTGCCTCAGACGGACGACGGAGGCCGCGACCTGTTGACGTGTGGCCAGTGTGGTCAAGCCTTTCCACTGGCCCACATCCTCACCTTCATCCAGCACAAACAGGGCGGGTGCGGCACGGCCAGACCCCGGTCTCAGGTCCACACTCCTCCCTCTCCGGCCAATTGGACGCAGCGATTCGGCCAAGGAACCCAGGTGGAGACGGGTTACGTGGAGCTCCGGCGTGTGACGGACAGGAGATGGAAGGAAGAGCCAGGTGTGAGGGTGGAGGCCAACCGAGCCGAAGAGCCTTCTATTTTCACCTGCCAGGTGTGTCAGTGCATGTTCTCCAGCGCATGGACTCTCCTCCAGCATGCTCAGAACGCACATTCCCTCAACATCTACCAAGTGGAGGACGACAACAGCCTCGTACAGACATCAAAACCGCCAGCCACAATGGATCCACGTCACCTGGGCGCCGCACTGGCCTCTGCGTTCCAGCCATCCTCTCGGCGATCCGCCCCCCTGCATAAGCCTCCCCACGGCTCCAGCATCGCACCTCGTGACCTGCAGGGCCTGAACTTCTCTATGTGCTTGCAGCGCTTGGCGGAGGTTAGCTGCAACAGCGGAGGAGTAGTCCCTTCCCCATCCCCGTCTCCACCGGCCGCTTCACCTTTTCCCCACTCAACTCCTCCGCTTCACGCAGCCTTCTCTTGCGAGCTGTGTGGCCAGGCTTTTCAATCACTGCGCAGCTTGTCCGCCCACCGCCGCACTCACGCCTGCGATAGGCCCTACCACTGCGGCGTGTGCCAGCTCACCTTCTCCCAGAGCGGCGAACTGGCACGACACATGAGGAGCCACCGCCGGCCTGCCACTGGACAGGAAACCGATCCCAACTCTGTCATTGCAGATGAAGAACGAAAACTTGCTGGACAGGGAGATAATGATATTTCCATTGGTCACGGAGCAGGTACGGAGACTGCGAAGCCTCCGGGAGGTACTAGCCTGATCTTAACGTCTTCGCAGTCCAATCGCAGTCTGCTCCGATACTACCAGGCTCATAGAGAAGCCGACGAAGAGGGTCAAGGTGAACCGCAGCAGCCATCACCCTATGGCAGCCCCTCAGAGGGCTCTCTGGAGAGCGGAGATACAGGTGGAAGCGGCGAGAGCGGGATTGCCAGCGGCAACTGCACACCAAAGCGTCCAGAACGGGAAGATCATCCTCAAGGCGAATGGGAGCGGGAGGTGGAAGCCGTGGAGATGCTCCAGGACTGGCAGCGGGAGAACGAAAGGAGGCAGGTCACCAGCGGAGcagggaagaagaagaaagaagaggcTTGCGAGTTCTGCGGAAAGTGTTTCCGCAACAGCAGTAATCTGACGGTCCACCGGCGCAGCCACACAGGCGAAAGACCGTACCGCTGTGGCCTCTGCAGCTACGCCTGCGCACAAAGCAGCAAACTCACACGCCACATGAAAACACACGGAGCCCGTGGGACACGTGCTGCCTTTCAGTGCCAGCTCTGCTCCGTTCCGTTCACTGTCTATGCCACGCTGGAGAAACACCTTAAGAAGGTCCATGGACTCACTCATGCCAGCGCCGGCGCGTACAGCCAGGGCCCGCTTTCTGATTATAGTGGCCTCGGCATCAAATTGGAGGACGACTCTGTCAGTGATCAATCAGCTCCCATCACAAGGCTCACAGAATCCAATGCGGACCTATCGGAGGAGCTCAAAGAGGAGGACGCTGAGATGAGGGTCAGCGCTGATGAGCAGTCTACCTCTGAGGAAACGGGCAGCACTGTGGCGTTAGGTCAAGCCACGGTATAAACATAGCATATGACTGATCGTGACCAAAACCACCAAGCTTGTTGATCTTCTGCCCACAACCCAATATGCACATCTTATCAAAAATCGAGAAGTCTTTTCTCAATTTCACCACAGTACTTAGAGACGCTTTAGAGCACAATGCTGATACTGTCCGAGGCTTGATAGATTCTGTTATCAGTACAAGTGCCTGCTGTTAAATCCTGAACTCTTCATCATCGTCAAGGCACTTCGAACCCCAGAATTGCATCTAGTAGAGCACAGTCAGAGACGTATGGAGATGGTTGTAAGTCACCTTTTTTGAGCCCAAAAGACAATCGCACAGAAAGACTAAGCAACCTGTGATTTTTGAATTCTACAATGCAGTTACGAAGTGGGATTACACTGTTGTGGCACTCTACCACAGGGCCTTAAAGGTTCATGGttcataaaaatcaaaaattgtGTTAGAGAGTGTTCTACATCAGGAGTGTTCTACATCAGGGGTGTACAGTCCTGCAGAGTTTGGCTCCAActccaatcaatcaatcacaccTGAAACAACTAATCAAAGTCTTTAGGTGTGTTAGAAtagctgaactttgcaggagCAGGATTGTACACCCCTTGGTCTAGTTAATACACAGTATAACAGTAGACCGATTTGAGCTTGTTTTCCCAACTATCTGACAGGgttgttttcatttgattacTGTATATTAATAGGACTGATTGGGTCTGTGGCAATACATGTTCACTGTCACTTATTACTGTTAAAGAGCATTTGTTTgccattttgtttgttgtttagtgtgtgtgtgtgtgtttgtgctgacattttgtaacattccacaaaaatgtatcacatatttgtttatataaccTCTATACTGCACAACAAACTCATTTTCCTTGTATTTTGTGAGCCTGTTTAGTCTGTTTACAGACTATATTGTTTTACTGCCGAGCACATAGAAATGCTATgaaaagttgtttattttgtttttaaaaaaaaattctccaggtttttttttttttttttttttgtggtcgtGCGAATGAAAAGCCTCATTTCTGATGAAAGTCTGGGTAGGAAACGACAGCACTGACCTTCTGAAAGGCGGACCCATTGAGAGAGCACTTGCGTTTGTGTGAGAGATATATGATATAAATCTATACAGGGAATGTTTGCTTTGTTACAGTTTTATACGATTATCATTGTCAGGGAACTGTTATGTTACGGTTTATGTTCGTGTGGTAACATATATGGTagaataaataatcaaatataataagcaatttttttttttttttttttttgtattaacaaATGTGAAAATGGTTGGACATCCAGTTGTGTCCGTTTCTTCAGGGAGCAGCGAAAACAAAGCTCTTTTTGTCctctgtatattattataataatttctgtTGATCGAAATGTCATGTCTTGCGTGATTtctcccagaattccctgcgtAGCCCACAACTTTGctgtgtattttgtatttccATGCCTATTTGTATGATAATTAAAAGACAGAGGCACAGTCGGa

Function

NR:

description
B-cell lymphoma/leukemia 11B-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216652.1 True 3584 mRNA 0.50 3 824825 835350

Neighbor

gene id symbol gene type direction distance location
siae siae coding upstream 11430 807366 ~ 813395 (+)
bckdha bckdha,LOC107554504,LOC107662140,LOC107560150,LOC107758241,LOC107676752 coding upstream 172290 643777 ~ 652535 (+)
tmem91 tmem91,LOC107757682,LOC107758240,LOC107560149,LOC107662142,LOC107676753 coding upstream 185961 615589 ~ 638864 (+)
ppp1r13l ppp1r13l,LOC107757772,LOC107758239 coding upstream 228411 580746 ~ 596414 (+)
rasgrp4 rasgrp4,LOC107758090,LOC107676755,LOC107662146,LOC107758237 coding upstream 258160 548817 ~ 566665 (+)
capn12 capn12,LOC107657473,LOC107757007,LOC107554500,LOC107560139,LOC107758230 coding downstream 6061 841411 ~ 862016 (+)
fosb fosb,LOC107757073,LOC107657472,LOC107560154,LOC107758249,LOC107662135,LOC108433461 coding downstream 39337 874687 ~ 880293 (+)
c18h19orf47 si:ch211-160d20.3,LOC107657470,LOC107662134,LOC107758250,LOC107560146 coding downstream 47598 882948 ~ 888956 (+)
ttc9b ttc9b,LOC107756857,LOC107560155,LOC107662133,LOC107758251,LOC107657468 coding downstream 56263 891613 ~ 914612 (+)
sipa1l3 sipa1l3,LOC107687359,LOC107554497,LOC107662132,LOC107758252,LOC107746578,LOC107560140 coding downstream 116548 951898 ~ 1019298 (+)
G123312 NA non-coding upstream 295206 529398 ~ 529619 (+)
G123301 ryr1b,LOC107676751,LOC107596888,LOC107758351 non-coding upstream 312193 511298 ~ 512632 (+)
G123282 LOC107676751,LOC107758351 non-coding upstream 348424 464104 ~ 476401 (+)
G123257 NA non-coding upstream 461789 361393 ~ 363036 (+)
G123422 map3k10,LOC107560156,LOC107554498,LOC107758231,LOC107668271,LOC107756783 non-coding downstream 15303 850653 ~ 919977 (+)
G123472 yap1,LOC107758259,LOC107662128,LOC107746561 non-coding downstream 187755 1023105 ~ 1051430 (+)
LOC122323124 NA non-coding downstream 261113 1096463 ~ 1129331 (+)
G123491 NA non-coding downstream 396416 1231766 ~ 1236921 (+)
G123493 NA non-coding downstream 408012 1243362 ~ 1250048 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other upstream 1150 814751 ~ 823675 (+)
G123243 NA other upstream 715993 108369 ~ 108832 (+)
tmem123 NA other downstream 209844 1045194 ~ 1054735 (+)
G123568 NA other downstream 730076 1565426 ~ 1571931 (+)
G123664 NA other downstream 1166436 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 1371849 2207199 ~ 2240260 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other downstream 1466408 2301758 ~ 2319140 (+)

Expression


Co-expression Network