napab (napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256)


Basic Information

Item Value
gene id napab
gene name napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 12917226 ~ 12925468 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216735.1
CCGGCCATGTTGGAAGTTTCCGCAGAGATGTGTTGATGTGGCTGGATTCCAGAGTCTGCTGCTGTTGAACTGTAAACATTATTCATGGATAACTCCGGGAAAGAAAAAGAGGCCATGGCTCTCATGGCTGAAGCCGAGAAGAAAGTAAAGTCATCGCAGTCGTTCTTTGGCTCTCTGTTTGGGGGCTCTTCAAAGATGGAGGATGCTTGTGACTTGTATGGAAGGGCTGCGAACATGTTCAAGATGGCCAAGAATTGGAGTGCTGCAGGAAACGCTTTCTCCCAGGCGGCGCTCCTACACTTGCAGATGCAGAGTAAACACGACGCAGCCACAAATTTCATTGATGCCGGCAATGCCTTTAAAAAATCAGACCCTCAAGAGGCCATAAACTGCCTGAACAGGGCCATTGAGATCTATACAGACATGGGTCGATTTACTATCGCAGCCAAACACCACGTCACTATTGCTGAAATTTACGAGAGCGAACTGGTTGACATTGACAAGGCAATAGCTCACTATGAACAGGCGGCAGACTATTATAAAGGCGAGGAGTCCACGAGTTCAGCCAACAAGTGCCTGCTCAAAGTTGCCACCTATGCAGCTCAGCTGGAGCAGTACCCTAAAGCCATTGAGATCTATGAACAGGTTGCAACACACGCAATGGACAGCACCCTGTTGAAATACAGCGCAAAGGACTATTTCTTCAAGGCAGCTCTCTGCCACTTCTGCGTGGACATGCTGAACGCTAAGCTTGCCGTCCAGAAGTATGAGGAAATGTTTCCAGCCTTTTCAGATTCACGTGAATGCAAATTGGTGAAGAAACTTCTAGATGCCTTTGAGGAACAGAATGTGGACGCATATACTGACGCTGTAAAAGAGTATGACACCATCTCGCGTCTGGATCAGTGGCTCACCACCATGCTGCTTCGTATAAAGAAATCCATACAAGAAGACGAAAGTGATCTTCGCTAAGACCTTCTTCCTCCCCCCCGGCCCTTGCCGCTCGCTCTGCCTCGTGCCTTTAACACCGTGACTTCAGTATGATGGTCGAATATTGCTCTCTTTTACCACCAACTCTACTCTCAGTGCCTTAACGCCCTTGCTTtacctccctctctctctctttctctctctctctatgacACAGCCGTATCTCCAGACCTCAGAGAACACTAAAGAAAGGAAGGCTGGTTGTTTAAGTGAGATTTGAGGGAGTGTTGCATGAGAGCTGCAAGCAGCCACAGTAATATTAAGGGGTGCTGTGCACACCAAGCTTCAGAAAAAATGCCTTGTGCTCTGGCTGAAACAGAGCACCCGTATTACTGAGCGCAAAAAGCCTTTGTTCATTCTGTTCTTTAGTTGtggcatatgttttttttttttttttgtggaaacacaATACCTTGTATCTCTGCTTATTTTTTGCTTGCTGATTGACTAATCttgaaaaattatttgaaatgctgttcctgttttttattttgacatgtggagaagaaaaagagtaaAAGAAGGACTGATTCAGCCTGTA
>XR_006246942.1
CCGGCCATGTTGGAAGTTTCCGCAGAGATGTGTTGATGTGGCTGGATTCCAGAGTCTGCTGCTGTTGAACTGTAAACATTATTCATGGATAACTCCGGGAAAGAAAAAGAGGCCATGGCTCTCATGGCTGAAGCCGAGAAGAAAGTAAAGTCATCGCAGTCGTTCTTTGGCTCTCTGTTTGGGGGCTCTTCAAAGATGGAGGATGCTTGTGACTTGTATGGAAGGGCTGCGAACATGTTCAAGATGGCCAAGAATTGGAGTGCTGCAGGAAACGCTTTCTCCCAGGCGGCGCTCCTACACTTGCAGATGCAGAGTAAACACGACGCAGCCACAAATTTCATTGATGCCGGCAATGCCTTTAAAAAATCAGACCCTCAAGAGGCCATAAACTGCCTGAACAGGGCCATTGAGATCTATACAGACATGGGTCGATTTACTATCGCAGCCAAACACCACGTCACTATTGCTGAAATTTACGAGAGCGAACTGGTTGACATTGACAAGGCAATAGCTCACTATGAACAGGCGGCAGACTATTATAAAGGCGAGGAGTCCACGAGTTCAGCCAACAAGTGCCTGCTCAAAGTTGCCACCTATGCAGCTCAGCTGGAGCAGTACCCTAAAGCCATTGAGATCTATGAACAGGTTGCAACACACGCAATGGACAGCACCCTGTTGAAATACAGCGCAAAGGACTATTTCTTCAAGGCAGCTCTCTGCCACTTCTGCGTGGACATGCTGAACGCTAAGCTTGCCGTCCAGAAGTATGAGGAAATGTTTCCAGCCTTTTCAGATTCACGTGAATGCAAATTGGTGAAGAAACTTCTAGATGCCTTTGAGGAACAGAATGTGGACGCATATACTGACGCTGTAAAAGAGTATGACACCATCTCGCGTCTGGATCAGTGGCTCACCACCATGCTGCTTCGTATAAAGAAATCCATACAAGAAGACGAAAGTGATCTTCGCTAAGACCTTCTTCCTCCCCCCCGGCCCTTGCCGCTCGCTCTGCCTCGTGCCTTTAACACCGTGACTTCACCGTATCTCCAGACCTCAGAGAACACTAAAGAAAGGAAGGCTGGTTGTTTAAGTGAGATTTGAGGGAGTGTTGCATGAGAGCTGCAAGCAGCCACAGTAATATTAAGGGGTGCTGTGCACACCAAGCTTCAGAAAAAATGCCTTGTGCTCTGGCTGAAACAGAGCACCCGTATTACTGAGCGCAAAAAGCCTTTGTTCATTCTGTTCTTTAGTTGtggcatatgttttttttttttttttgtggaaacacaATACCTTGTATCTCTGCTTATTTTTTGCTTGCTGATTGACTAATCttgaaaaattatttgaaatgctgttcctgttttttattttgacatgtggagaagaaaaagagtaaAAGAAGGACTGATTCAGCCTGTA

Function

symbol description
napab Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Predicted to be involved in several processes, including SNARE complex disassembly; glutamatergic synaptic transmission; and regulation of synaptic vesicle priming. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of synaptobrevin 2-SNAP-25-syntaxin-1a complex. Predicted to be active in vacuolar membrane. Is expressed in head. Orthologous to human NAPA (NSF attachment protein alpha).

NR:

description
PREDICTED: alpha-soluble NSF attachment protein

GO: NA

KEGG:

id description
K15296 NAPA, SNAPA, SEC17; alpha-soluble NSF attachment protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216735.1 True 1531 mRNA 0.46 11 12917226 12925468
XR_006246942.1 False 1422 transcript 0.46 12 12917226 12925468

Neighbor

gene id symbol gene type direction distance location
ehd2b ehd2,ehd2b,LOC107565090,LOC107668886,LOC107670629,LOC107554987 coding upstream 2913 12905342 ~ 12914313 (+)
bicra gltscr1,LOC107758076,LOC107565091,LOC107554986,LOC107670631,LOC107668814,LOC107714538 coding upstream 12643 12891984 ~ 12904583 (+)
dhx34 dhx34 coding upstream 41536 12868041 ~ 12875690 (+)
st14a LOC107758079,LOC107668533,LOC107554966,LOC107714535,LOC107670627 coding upstream 49503 12854160 ~ 12867723 (+)
LOC122362670 LOC107691836,LOC107758058,LOC107578181,LOC107572720,LOC107670622,LOC107714531 coding upstream 321837 12592067 ~ 12595389 (+)
b3gnt2l LOC107758074,LOC107669052,LOC107554988,LOC107670608,LOC107753015,LOC107565088 coding downstream 1217 12926685 ~ 12931168 (+)
ilvbl ilvbl,LOC107758073,LOC107669134,LOC107753009,LOC107670636 coding downstream 31145 12956613 ~ 12966494 (+)
fam118b fam118b,LOC107669270,LOC107565084 coding downstream 43488 12968956 ~ 12978634 (+)
arfgap2 arfgap2 coding downstream 65380 12990848 ~ 13000860 (+)
large2 gyltl1b,LOC107670633,LOC107670096,LOC107554994,LOC107602128,LOC107758043 coding downstream 126500 13051968 ~ 13165194 (+)
G125784 NA non-coding upstream 275790 12641192 ~ 12641436 (+)
G125783 NA non-coding upstream 280843 12636156 ~ 12636383 (+)
G125760 NA non-coding upstream 327282 12579725 ~ 12589944 (+)
G125753 NA non-coding upstream 504981 12411865 ~ 12412245 (+)
G125750 NA non-coding upstream 522494 12393511 ~ 12394732 (+)
G125855 si:ch211-71n6.4,LOC107758068,LOC107753016,LOC107670624,LOC107578946,LOC105902995 non-coding downstream 84406 13009874 ~ 13012900 (+)
G125877 NA non-coding downstream 412286 13337754 ~ 13339066 (+)
G125879 NA non-coding downstream 421210 13346678 ~ 13346937 (+)
G125881 wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204 non-coding downstream 425023 13350491 ~ 13351730 (+)
G125886 NA non-coding downstream 441948 13367416 ~ 13369511 (+)
G125836 NA other upstream 32614 12880588 ~ 12884612 (+)
G125830 NA other upstream 94445 12809450 ~ 12822781 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other upstream 1571429 11330221 ~ 11345797 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other upstream 1680079 11234331 ~ 11237147 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other upstream 1683412 11226113 ~ 11233814 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other downstream 21373 12946841 ~ 12955945 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other downstream 291016 13216484 ~ 13222148 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other downstream 501576 13427044 ~ 13430765 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other downstream 744821 13670289 ~ 13706114 (+)
G126132 foxa3,LOC107717614,LOC107692498,LOC107602118,LOC107727696,LOC107575381,LOC107670595 other downstream 753577 13679045 ~ 13682571 (+)

Expression


Co-expression Network