tmtc2b (LOC107673141,LOC107722480,LOC107670376,LOC107738412,LOC107587029,LOC108414015)


Basic Information

Item Value
gene id tmtc2b
gene name LOC107673141,LOC107722480,LOC107670376,LOC107738412,LOC107587029,LOC108414015
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 22668197 ~ 22762542 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216753.1
CACTCTCGGTGTAAGGACGTCCAAACACAGTCGCGcgtactgtaaatactgtatgtgcACCATCCACTCTAGCCTACGGGATTCTCTCCGCAAATAACATGGGTTAAGAGGAGGATGTCTGGATAATTCATTTCAACACTTTGCAAGGATGGGGACTCGGATATTGTTTTTTGGCAGAGGCATTTTGACAAAGACGAAGAGAGAAATCAAAGAAGGGCTTTAATATCATCCTTCAACTCTTTCATTtcctttccttcttttcttttttgagagATGATCGCAGAGTTGGTGTGCAGCGCCGTGGCACTGCTCCTGTACGTCAACACACTGGACGCCGATTTCTGCTACGATGACAGCCGTGCTATCAAAACCAACCAGGACCTCCTCCCTGAAACGCCATGGATCAACATCTTCTACGATGACTTCTGGGGGACACTTCTCACCCACAGTGGTAGCCACAAGTCCTACCGCCCGCTCTGCACGCTCTCCTTTCGACTCAACTTTGCCCTGGGTGACTTGAACCCCTGGGGTTACCACCTAGTTAATGTGGTACTACACTGCACCACGACCGCCCTGTTCTCTAGCCTCTCAAGCCTGCTGCTGGGGTCGGGTTGCTGGAGCCTGCTGGCCGGGCTTCTCTTTGCCGCTCACCCCATCCACACTGAGGCTGTGGCTGGCATCGTGGGCAGGGCCGATGTAGGAGCCGCCCTCTTCTTCCTCCTGGCCATGCGCTGCTACATACGCCACTGCTCCCTGAGGACGAGTGGTGCCCATGGAAGGAGCTGGACGTGGTTCTTGGGCACCTTGGCATGTGCTTCCTGTAGCATGCTTTGGAAGGAACAAGGCGTGACTGTTCTGGCAGTGGCTGGCATGTACGACATGTTTGTCTTCAACAGGTTGAAGCTGCAGCAAGTTCCCGCTCTCTTCCAAAAGaaGAAGAACCTGCACCTGCTCTTGAGCGTGTTTCTGCTGGGCTTCTGGGGTGTCATCCTTTTGGCTTGTCGGCTTTACTGGATGGGAAACAAACCTCCGAACTTCTCCAACTCGGACAACCCTGCAGCAGACTGCCCTTGTTTTCTAACTAGGACGCTAACGTTCTTTTTTCTCCCCGCCATGAACGTTTGGCTCCTCCTGTGCCCTGACATGCTAAGTTTTGATTGGTCAATGGATGCCCTGCCTCTTGTGAGGAGCTTTGCAGATTGGCGAAACCTCCACACCGCGGCCTTCTACACCTCGCTTCTAGCGCTGGCATGGTTTGGCCTTTGCCATTACCCAACCAAAAGCAAGGAGACCAATGGGAAAGCACATCATGTAGCAAACGGGAAGTCCACAAACGGACACAGTTGTAGCTCTGATTATGAACACCTAACTGTTTACTCAAACTCAGTGCAGATGAATGGAACAAATGGCACTGCAAAACACTATTCATCGTCTTTGCCCACCACAGAGAGTTTGGTGGTCTTCTCATTGGGTCTGCTAGCCGTTCCTTTCATCCCTGCCACCAATCTATTCTTCTACGTAGGTTTCGTAGTGGCGGAGCGAGTACTATACATCCCTAGTATGGGCTTCTGCCTGTTGGTAGCAGTGGGGATGAGAGCTTTATATGTCAAATTGCGGAGGAAGTCCTCCAGAACTTTGGTGCTAGGCTGCTCAGCGGCCTTGGTCCTTCTTTTTGGGATTAAGACGATGTTGAGGAACCGTGACTGGCAGAATGAAGAGATGCTATACAAGTCAGGGATATCTGTGAACCCTGCTAAAGCTTGGGGTAACTTAGGAAACGTTCTCAAGAACCAGGGAAAGGTGATGGAGGCCGAGCAAGCCTACAGGAACGCTCTGTACTACCGGAGGAACATGGCTGACATGTTGTATAACCTGGGTCTGTTGCTCCAGGAAAACAACAGATTCTCAGAGGCCCTCCACTACTATAAGCTGGCCATTGGGAGCAGGCCAACGCTGGCTTCCGCCTACTTGAACACAGGGATTGTTCTGATGAACCAGGGCCGTCTAGAAGAGGCCAAGCGCACTTTTGTGACTTGTGCCGATATCCCAGATGAAAACCTGAAGGATCCTCATGCACACAAGAGCTCAGTCACCAGCTGCCTGTATAACCTGGGAAAGCTTCTTCACGAGCAGGGCCAACAGGAGGAGGCCATATCTGTATATAAAGAAGCAATACAGAAGATGCCTAGGCAGTTTGCCCCACAGAGCCTTTATAATATGATGGGAGAGGCCTACATGAGGCTGAACAAACCGACGGAGGCAGAACACTGGTATAAGGAATCCCTAAGAGCCAAACCGGACCATATACCTGCGCACCTCACTTACGGCAAGCTCCTGGCAATGACGGGTCAGAAAACGGAAGCGGAGAAGTTCTTTCTCAAGGCGATCGAGCTCGATCCCACTAAAGGAAACTGCTATATGCATTATGGTCAGTTTTTGCTGGAGGAGTCGCGGCTTTTGGAGGCAGCTGAAATGGCAGAAAAAGCCGCCCAGTTGGACAGTGAAGAATTTGATGTGGTTTTCAGTGCAGCTCACATGCTCAGGCAAGCCAGTCTCAATGATGCCGCTGAGAAGTACTACAGACAAGCAGCCAACCTGAGACCCAACTATCCCGCAGCCCTCATGAACCTCGGAGCCATTCTCCATCTCAACGGCAAACTCCAAGAAGCGGAGGCCAATTACCTTCGAGCTTTGCAGCTGAAACCAGACGACACCATCACTCAGTCCAACCTACGGAAGCTGTGGAACATCATGGAAAAACAGGGCTTGAGGACCATGGCTCCTTGACGTGGACATATTTGATGGAGCACCTTCACTGAAGTTGCAAAGGAGACGTTCCTTCTGAGCTCTCGCTAATGAGGTAAACGACATCCTAGGGCTTTTACCTCATGGGACGCTTGAACGTATGACAGCAGCTACGTCTGGTAAAACCAAGACATTCTGGAACAATCTAGAACTGCGGAGCTCCCCAAGAAGTGTCGGGAGCTGTTAACTTGAAGTGGCCCATAGATACATACTTGAAGTCTCAtgataaattagattttaattagTTAGTCGATGCTTAATAGTCTTGAAGGGCAATATTTGCCCTGAGGCTGTATGAAATTAAGAAGGAATGAGAGTGCTACAACCCCCATGAGGCTATACTCTGCATGTACAGTACATTTCTTCATTCATATGATTggaatcattaatatttaatgagcaCATCATGGCTGATGGAAACgcgaaaaaaaaatcataccattaaaacatcaacaaaataaTGAGATAAATAGACCAAACATATCCTAAAAGTTTCtcactgtaaagaaaaaaaatgcaagcatTCATTGTGTCAAAATGATCGATTTGTGTGGTTGTAGACTTAATGAAATTGTACATAGGAGCACGGACGATATGTGAAggatacagattttttttacgaATGCATTTACACGTTCCATCGATCCAGACACGCCTGCCCACGACACTAGATAACTTCTGGGTTCGAGGAATTGGATCCATTTGATTAATCTTGCCAAAAATGACAGGAAAACAGGAAGGAACGTTTGATAAGCTCTATAGCCTGAAGGAAATGTTGGAAGTCGAACTTGCAAGCTCTCTTTGCCTTACTTTGCGAAAAATCTGTTCTATAACAGAAGGATCCAGTGGAATTAATTTACTTGTTGCATTACTAATATAAAATGGAGATGGAGATGTTCGCGTGTTATAAAATCCCATTCagaagtgtgtttgtttagttACGCTACCGTTCAAAATTTTGGGCTCACGAACACATCCGAAAAGTTGTGCTAAAACAAGAACTggcattgttttgattttaggaCAACTTTTATGGAAGATTTTTatccatttcaaatgttatttatataatataactgttttcaaGATTGTTAATATAAGAGGTGCTTCTTGAGCTCCacatcagcatatcagaatgatttctgaaggatcatgggacactgaagactgaaataataatgcagaaaattcagcggcaaatttcttttacattttaatcatatttcacaatattacagtgtttttactgcatttatgaTCAAGTACTTATAATGTCAGTACATTATAAGTTTCTTAAAAACCATAAAATCCCAAAGTTTTGAAAGGTAGTGTTGATTAGCTCTGAACATTAGGATGTAGGACATTGGTTAGTTCTGATGGCTGTGTCCTTGGACTGAATTGGTTCAACAGATCAGTAGTTTAACTACAAAGCTTTGACTGGTAACTCCTAACCAAATACAAAACCTCTCACTCGTTGCACTCATCTAACAATATACAGCCATAGTTTTGTAAAGGATTGTTTATATGTAAtgttgctttaatatttttcttctaCGTTTGAGTGTATAAATGGAACCTAATATATGAAATGACACGTTACACGGTGTGATGTTTTGCTCAAACACGGAAAAACAGTGAGCCAGaatcattatatacatttacttgtttagaactgtttagTTTATTCTGCATTTACTTGTTTCATAATTGTCTTTGTTCATACTCGTTTATGATTTCCAACTTTTGTATATGTAGCGACTAGGAATGATGGGTGATGTGGGGGTTGTTTgggtttttgtttagttttttacaaatctttttttttattgtgatacGAGCCTTCTCGccatcacttaaaaaaaaaaaaatgaagtgaaaactTTGACCTGAAAATTAAATTCTGCCGTTTCTCGCCCTCAAACCAATTCTGTTAACAGGAAAAAATTAGGGTGGAATCGGTTTGCAAAAAGCACGGAAAAAGTCGTTCGTAGtggcttttattttaagttgagtTTTCAGTCAACTACAATAAgcgtttttttcacatttccagAAGCTATACGATAGCTTTgtgtgataaataaatattataaaccgCTTATTTGATGCTTTTTGCGAAATTCCAGTCCCCCGTTCGATGCAGTAGCATGGAAATGAGCGATTAAATgtatttggaatgacatgagggtgaataaataacggaatattaatttttgagtgaacaatCCTTTTACAACTCTAGCAAATCTCACGTCAGACGGCTGAGTTAGTATTAACTTATTCCCTTTTATGTTGTCTTGATGgggtaaaaaaaggaaaagaaggaaaaaaagcagcTGGCTCTGTCTTATATGTCAATAGTGtatgaaatatttctgattcAAGATGCcctttttctaaatatatttttaagctgaACTAATTCATTCGTTGTTTCAGTGTGTACCGGGAACATTTTCTAAGGGAATAAACCCAGAATTTGTCACACATTCGTCTAGACAGTCTCTCAGACGAACCTGTTTTCACAAGTCTTCACATTTCTTTGCTTCCATCGTCTTCTCTTTCCTCCCAAAGTTAACGAATCAGTATATTAGTAAATAGTCCGATCTTTATAAAGAGCATTTCTGAGCATTATCACAGAATGGTGCAGTATATTAAAAGTATAGTTTGCCTAATTTAAAATCCTGGAGcttttcatgtcattccaaagctgtttttttttttttttttttaggacaaCACGAgtgagtaaattaataaaaggtgttttaatttttggatgatcggtacatttaaagggatagttctcccccaaaaaatggaaaattgctgaaaatgcGTACTCGTACTCAAGCCGTTCATGATGTAGCTTGTTTCTTCAATCGCGAGCATCAATTACGTCTCGTGAAGCAAAAAagttgcatgtttgtaataatcGAATCCATCGCTGAGCTGTTTTGATCAATTTTTCAGCTCAACCATTCCTCAAAAACGCCACCGCAGTAGAATAATATTGGAGTAAAAGACCTCCCGTGTCTTCGAAGGACGCGAGTTCTTCATAGTTAGCACATTATCTTAGTAAACcctttgtcattttattgagtCTCAGTCGTAACGTGATTGTGTCTTGTCTGTCCTCCACAGTGTAAGTTATCAGCGTAGTTTCTAGTGCTATTAGCTGCTGCTGCATCCACGCCGTGCTGTTTTTAGCTGTACCCCCGTGTGTCAGTTTTCACATCAGCTCACACAATGCAGACTTACATGACTAAGACACCTTCACCCGTGTACTGTAGGCGTGAGTGTTGAAGTCTTTCCTCAGGGATTTGGAGAGAGGTGCTGATATCGAGGTTGGTGCTCTCAGAGCAGAGAAAgagtttacttttaaaagttttttttttttgaacagtgtTGCATTTGTATAAATTATCAAGATTTGTAGCCTTTCTTGCTTCTGTTTTTGTATAAAGACTGACGTATGTGCCAGATAAGACTTTTTCCCCAATGTCACGTTTTTTCCTTAATAAAGTACCCGGTGTTCTGCTCTCTT

Function

NR:

description
PREDICTED: transmembrane and TPR repeat-containing protein 2 isoform X1

GO: NA

KEGG:

id description
K23424 TMTC; protein O-mannosyl-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216753.1 True 6352 mRNA 0.43 12 22668197 22762542

Neighbor

gene id symbol gene type direction distance location
LOC122362983 hipk2,LOC107722467,LOC107568633,LOC107738404 coding upstream 31332 22623124 ~ 22636865 (+)
LOC122362807 srgap1a,srgap1,LOC107670373,LOC108264626 coding upstream 46009 22583917 ~ 22622188 (+)
LOC122362804 cmip,LOC107684659,LOC106560887,LOC106573687 coding upstream 144025 22498257 ~ 22524172 (+)
si:ch211-260p9.3 LOC107587040,LOC107666218 coding upstream 200938 22452446 ~ 22467259 (+)
LOC122362770 cotl1,LOC107559813,LOC107722478,LOC107684658,LOC107666224,LOC107738394,LOC107587015 coding upstream 246951 22416782 ~ 22421246 (+)
bicd1a bicd1,LOC107722484,LOC107738411,LOC107587026 coding downstream 54815 22817357 ~ 22849043 (+)
fgd4a LOC107722468,LOC107670369,LOC107587027,LOC107684651,LOC107738409 coding downstream 87384 22849926 ~ 22889500 (+)
tbxas1 tbxas1,LOC107722474,LOC107684653,LOC107587020,LOC107738402,LOC107559817 coding downstream 318485 23081027 ~ 23140905 (+)
LOC122323065 LOC107559809,LOC107684685,LOC101063805,LOC104959708,LOC102203720,LOC107587043 coding downstream 478931 23241473 ~ 23242712 (+)
LOC122362508 LOC107559815,LOC107722485,LOC107684656,LOC107666231,LOC107738399 coding downstream 481995 23244537 ~ 23250136 (+)
LOC122362810 NA non-coding upstream 104993 22560391 ~ 22563204 (+)
G128385 NA non-coding upstream 116583 22550445 ~ 22551614 (+)
G128379 NA non-coding upstream 124664 22536775 ~ 22543533 (+)
LOC122362809 NA non-coding upstream 128302 22538382 ~ 22539895 (+)
G128377 NA non-coding upstream 132773 22534466 ~ 22535424 (+)
G128431 NA non-coding downstream 179040 22941582 ~ 22944126 (+)
G128451 LOC107722467,LOC107568633,LOC107587022,LOC107738404 non-coding downstream 231556 22994098 ~ 22994341 (+)
G128453 NA non-coding downstream 233209 22995751 ~ 22996031 (+)
G128454 NA non-coding downstream 235222 22997764 ~ 23001633 (+)
G128458 NA non-coding downstream 239893 23002435 ~ 23002655 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 229518 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 256240 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 2027138 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 2067678 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 2111570 20551148 ~ 20556627 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 694558 23457100 ~ 23736848 (+)
G128858 NA other downstream 1687223 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 1821303 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 2532201 25294743 ~ 25309740 (+)
mt2 NA other downstream 2583850 25346392 ~ 25348594 (+)

Expression


Co-expression Network