bmp16 (LOC107566293,LOC107692530,LOC107709563,LOC107577119,LOC107725066)


Basic Information

Item Value
gene id bmp16
gene name LOC107566293,LOC107692530,LOC107709563,LOC107577119,LOC107725066
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14843211 ~ 14850376 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216812.1
AGGAAAAAGGGGAGGAGAGCACAAAAGAGAAGTACAGACAGATTGAGAGAGGAAGGGAGAAAGTCAGCTACAAAGCCAGTGGGACAGGAGGGAATTTAGCCGGCACAAACTTCCAAATCTTCCTCTGTCATCCGTTTCATTATCCTGGTCTCCTTCTCAGCTGCTATTTCGAGTCCTGGTCCTAGGCTAACAGGGAGCCACAGGGAAGCCGGCGGATGTTTTTTAAAAGCGCTCTTCTGACACTCAGAAGAGGATGAGCGCTTGAAGACAAGCTGGAGAGGCTGACGTTGTTCCAGAGGTACATTCACTTACCCAGGAGAGGCAGACGACGTCAACTCCGTCCTCAGGAGCGAATGAGAGGAGAGGGTCTGTAACGCTGGAGCTCAAGGACAAACCATGGACTCTGCACACCTCCCACTTCACTTGGACGTCCAACATGTTCCCTGCTAGCCTACTGGTTCTGATGATCCTGCTGCTACCTCATGTCTCATCAGGTCAACAGGAGGGTCCCAGCCAGACTCATGGAAACCTTGATAGTCCTCTGGAACCGAGTTTGGCCCATACCATTCAAAACCTCCTGTTGAGCCGCCTGGGCCTACAGTCACACCCCAACCCCAGTACAGAGGCACGGGTGCCCCAGTATCTTTTAGACCTGTATCGATTCCACACTCAACAGTACCATCTCGTTGAAGACCCAGAGTTTAGCTACCCCTCCCAGCATGTGCAAGGAGCCAACACAGTCCGATGCTTTCACCACACAGATTCTACAGTCCTGAAAACAACAGGGGACGGCATTCACATTGGCTTCAATCTGTCCTCCATCCCGTCAGAAGAGAGCGTGGTTTCAGCAGAGCTCCGTTTCCTGCACGGAGGATCAAGTCAAGATGTGGTCAGCCTTTTTCTTTCCAATAGTGACCCTGCATCAAAGCCCACACTGATCCATTCGCGTCGCCTGACTAAAGATCGAAAGGCCACAGAACTCTGGGAAACCTTTGCTCTGGATGGAGAAGTGTTTCAGAACCTATCTGAGAGGTCAGGGAGCCTGTCTTTTATTCTGGACATTATTGCTGATAATAACAGCAGCCTTTCCCAGGAGAGACATCTGCGGGTGCGCAGGTCCACCGGGCAGGATGAGCACAGCTGGGCGAGGCAGAGGCCGCTGCTGGTGACTTACAGTCACGATGGCCGCAGCCAGCCCTTTGTGCCCCTCAAAAAGCAGACCCCTGCTGGCAGACGAGGCAGGGGCAGATGGACCGGGGGCAGGTTTAAGGGTGATAGGGGTCAGGGCTCTGACACAGATTGGCGGGTGGGATGGAATGAAAGGCGAGTGAAACGACACGGTGGGAGGGCTGCCAAGCTCAAACGGCTCTCCAGGGCTCGCTGCCGTCGACACCCGCTGTATGTGGACTTCAAAGACGTAGGATGGAATAAATGGATCGTGGCCCCGTCCGGTTATGATGCTTTCTTTTGCCTTGGAGAGTGCCGCTTCCCACTGGCTGACCATATGAATTCATCTAGCCATGCCATGGTGCAGACGCTGGTCAACTCCGTGAACGGGGCCGTGCCGCGGGCCTGCTGTGTGCCGACGGCCCTTAGCCCCATCGCCCTCCTCTACCTGGACCAGGAGGAACGAGTGGTGTTGAAAAACTATCAAGACATGGTGGTGGAGGGCTGCGGTTGTCGATAGCAAAATTCTCATAgaacagatgaaaaaaatagGGCTAAAAGCAGtaagtgagaaaaaaaagcaaggtAAAACTGTCATAACGAAAACATGAGCACCTTCCTGTAGTCCTCTGGAagccatttttttcttcttgtgtcCAATGAAGCATTGTATTTGTGTGAACAACGACCCTTAGAAGCACTCAGTACCAACGTGACGTGTCTGTCTTATGTAGTACACTCCAGCTTTCTGTCTTGTAGGTGTCCAGTAGCTACAGTATGTTCTTGTTGTTGTGTCCTTCCAGCTCCCGTTTTGTGCGTCTTTCCCTCGTAATCATTACTTCATCGACAACTCAAAGGGACCAAGAAGTGACCGGGGACTCTTATTGAGCATTTGGCGCTGGACAGACTTAAACCTGAGAGGAAGTGAACTCCTCGTCTctggttgcaaaaaaaaaacttcaatgcATGCACTGTGACAGAGACTACAGCTGATTACAGGGCACTTCTACTCATGAGCTATTTAAAAATCACGACACCATGAAATTATGATGTTATTGTCTAAATGTGTTAGTGCTATTATTTATGGTGacctgttatttttttatgtacgGTGCAGTCCAAAGAAAAGTTTGCTATACAAATACTTCTGTGGTAGTAAAGTAAATCTAATTTAAGAATGCAtcaatatatatctatttaattAGCAGAAAATATGGAATATTTAATCTTGACAAATACTGCAGATATATAAGTACCAGAACGCCTTATAGATCCATTTAAAGCCAGTTAAAACTGGTGTTGCTCATCTATTATTTGTAAAACCACAGCACTGAATCATGGCAGCTTTATATTGGCATTGACTGAACTATGAGGGCTCTTTCATTACAATTGCAGCTttgtaaaacaaagaaaattgcCTAAACATTCCACGGTATGGTGCcaaatgttatgttatgtgtCATAGGTGTGCAAGCTTGTTAAGCAGTATTACACATAACTTGTCTATTGTCATCATGTAGTTATCACACAAGTATTGACCGAACTGTTTGTATTAATAGACAACAGGTTAGAAAAAAAGTGTCCAATCTTATTCCGATGTTCTGCCATGAATAGCTGATTATATTTTAGTGTGATGCTTTACGTGCAGTTTGAACAAAAGCCTTGAGAATGTCTGACATTGTCTGGAGCCATTGtgaaatgtgtaataataaacagcaaacTAATCAGGCA

Function

NR:

description
bone morphogenetic protein 4-like

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216812.1 True 2898 mRNA 0.47 3 14843211 14850376

Neighbor

gene id symbol gene type direction distance location
kcnj5 kcnj5,LOC107725067,LOC107558569,LOC107709561 coding upstream 67818 14752182 ~ 14775393 (+)
fli1 fli1,LOC107692484,LOC107656981 coding upstream 115324 14704160 ~ 14727887 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding upstream 259957 14578170 ~ 14583254 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding upstream 696024 14130499 ~ 14147187 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding upstream 716367 14123396 ~ 14126844 (+)
ppp1r37 ppp1r37,LOC107692481,LOC107566290,LOC107709550 coding downstream 21392 14871768 ~ 14901407 (+)
shkbp1 shkbp1,LOC107692479,LOC107724139,LOC107656962 coding downstream 60668 14911044 ~ 14921023 (+)
si:ch211-136a13.1 LOC107727474,LOC107566284,LOC107692514,LOC107722278,LOC108264834,LOC108435511,LOC106580732 coding downstream 201668 15052044 ~ 15064838 (+)
yif1b yif1b,LOC107566288,LOC107564401 coding downstream 216486 15066862 ~ 15072223 (+)
dusp8b LOC107713871,LOC107692476,LOC107569904,LOC107599770 coding downstream 582580 15432956 ~ 15442131 (+)
LOC122323060 NA non-coding upstream 99767 14740786 ~ 14743444 (+)
G126285 NA non-coding upstream 372196 14470760 ~ 14471015 (+)
G126262 NA non-coding upstream 400708 14375565 ~ 14442503 (+)
G126251 NA non-coding upstream 722361 14120193 ~ 14120850 (+)
G126243 NA non-coding upstream 774340 14068604 ~ 14068871 (+)
G126347 NA non-coding downstream 81945 14932321 ~ 14984748 (+)
G126345 ltbp4,LOC107724163,LOC107566282,LOC107692515 non-coding downstream 86549 14936925 ~ 14937634 (+)
G126458 NA non-coding downstream 215970 15066346 ~ 15066577 (+)
G126591 NA non-coding downstream 910587 15760963 ~ 15820330 (+)
G126605 NA non-coding downstream 975051 15825427 ~ 15828353 (+)
gemin7 NA other upstream 14919 14826788 ~ 14828292 (+)
G126146 gramd1bb other upstream 901842 13940095 ~ 13941369 (+)
G126175 NA other upstream 930411 13909564 ~ 13912800 (+)
lbhl lbhl other upstream 973879 13861871 ~ 13869332 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other upstream 1137097 13670289 ~ 13706114 (+)
LOC122322993 LOC107709552 other downstream 56240 14906616 ~ 14910157 (+)
LOC122362588 NA other downstream 185007 15035383 ~ 15047893 (+)
LOC122362954 LOC107740354 other downstream 1100606 15950982 ~ 15953653 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other downstream 1196693 16047069 ~ 16055627 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other downstream 1413463 16263839 ~ 16271267 (+)

Expression


Co-expression Network