LOC122323149 (LOC107561063,LOC107705779,LOC107686622,LOC107561062)


Basic Information

Item Value
gene id LOC122323149
gene name LOC107561063,LOC107705779,LOC107686622,LOC107561062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19945146 ~ 19954199 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216817.1
gaaagtTTCTCCCAGATGCAGAAGACATCAGCACTGATCAACATGTCTCTCACCTCTCTGCTCCTGGCCGAGCTTCTGCTGGTCACCACGGTAACAGCTTCACACTTCTATGGGGGCTCAATGACCTTCAACCCAAGAAGGAATAACGATGGATCTTACAAGGTTGAGCTTCGCTTCAAGACAACCTACCATTCCTGTTATGGATATGATTACTGGTCGTGCATCTCTGGAGACTGTGGAAATGATGTCAGTTCTGTGATTGGTCAAGTAGATTCAAGTCCAAATGGTGACAATTGGTGTCAGTCTGAGGGAGTGATAACAAAGATAGTTTCCACCAACAGCCCATTCCAGCTCctCAAAAGTGGttgctgctggatctacaacaCTGTCACAAATTCTGGAGACTGGAGTCTTCTCACTTACATTGACCTTGGTGTGAGATCAGACACCTCAGAGCCCAACCGATCACCAATAACAACCACCCTACCATTTGTCAGAGTTCCTCAAAACTGTCCCAGGAGGTACAATCTTTTAGCCTTTGATCCTGATGGTGACCATGTCACATGCAGATTTGGACTCAGACAAAACATGGAGTGTGGAATCTGCAACCAACCTGCTGGTTTTACATTGGATGAGCATAACTGCACTCTGTCATATTCACACACATTGGTCCTTGGAAGTTATTCATTCGAGCTGGTGCTGGAAGACTTCCCCACTCAAAAGATTACTCTGTCCTACACCAATCaacctttaaaagaaatatcTCCACGCATTGCCATCAGAAGCCGACGTTCTGTAACATCTATAGTATCTCAAATAACCATGACATCACCCACAACAACCACTACATCATGGACGACAACAACCACTACatcaccaacaacaacaactacatCTCCGacaacaacaactacaacaTCACCGACAACAACAACCACTACATCACCGACAACAACAACCACTACatcaccaacaacaacaactacatCACGGACAACAACAACTACTACATCACCGACAACAACAACCACTACATCACGGACAACAACAACCACTACatcaccaacaacaacaacaacatcaccCACAACAACCACTACAACACCTACAACAACCACTACTACATCACCGACAACAACTACTACATCACCAACATCAACAACTACTACATCACCGACAACAACAACCACTACATCACCGACAACAACAACCACTACatcaccaacaacaacaactacatCACGGACAACAACAACTACTACATCACCGACAACAACAACCACTACATCACGGACAACAACAACCACTACatcaccaacaacaacaacaacatcaccCACAACAACCACTACAACACCTACAACAACCACTACTACATCACCGACAACAACTACTACATCACCAACATCAACAACTACTACATCACCGACAACAACAACTACTACATCACCGACAACAACAACCACTACATCACCGACAACAACAACCACTACATCGCCGACAACAACTACTACATCACCGACAACAACAACTATTACATCACAGACAACAACAATCTCTACCTCACCGACAACAACTACATCAACGACAACAACCACTACATCACCAACAACAACCACAACTTCACCAACAACAACCACTACATCACCAACAACAATCACAACAACACCTACAACAACCActacatcaacaacaacaaccacaacaacacCTACAACAACCACTACATCACCAACAACTACAACATCACCAACAACAACCACTACATCACCGacaacaaccacaacaacacCTACATCAACCACTACATCACCAACAACTACAACATCACCAACAACAACCACTACATCACCAACAACAACCACATCATCACCAACAACAACCACTACATCACCAACAACTACAACATCACCAACAACAACCACTACATCACCAACAACAACCACAACTTCACCGACAACAACCACTACATCACcaacaacaaccacaacaacTCCTACAACAACCACATCAACGacaacaaccacaacaacacCTACAACAACCACTACatcattaacaacaacaacacttaCAACAGCCACTACAACACCTACAACAACCActacatcaacaacaacaaccacatCAACACCTACAACAACCACTACATcaacaacaaccacaacaacacCTACAACAACCActacatcaacaacaacaacctcaACAACTCCAACAACAACCATTACATCGCCTACAACAACCACTGCATCAGCTGCAACAACTTCACCACTGAGCACAATACCTCTTCAGTTCTCTCTGAAAGTTGATGGTCCGGCACCATCATGCACTGAGGGTGAATATCTACCACGGTTTCTTCACCCAACTCCTCATCATGGAGAACAACTTCAGGCTCGTGTAAATCAAGAGCTTGAGATCAGAGTGAAAGCTGTTGCATCTTTTTCTAGaaTCGTTGATGTCATCATTAGTGGACCTCTGAACAGCACAAAGTACAAAACCACCACTGAGGAATATGTGATTAACTGGACACCAACTGCAGAAAACTACGGCCAACATTTTCCATTTTGCTTTATCGCAGAAGGACAATATGGACTTGACATTTACCACTCTGAGATGAGGTGTGTTGTTGCAAAGGTTGATGCTAAAGGACCTGAGACGAGTGTAACCTGTACTGAAAACTCAATGTCGGTGACAATTAAGAGATCCTCCATCAAAAACCTCAGCGGTGACCACTTGAGACTGATAAATCCATCTTGTCTGGTTTACACCAACACTACCCACCTGTTCACCAACACACTTCTAAACGACTGTGGCACTCAGATTGAGGAGAACAATAATGAACTCATCTTCAAGAATAAAATCATTACATTCGATGATCCCAGAGACATTATAACCAGGAGGGATAACCTAGAAATTGAAATCCTGTGCAAATACCAGAAAAGGAGCAACGTTACGCTGGAGTTCGATACTCACAGACCGCCAATCATCATCTCAGAAAAAGGTTTTGGAACATTCAACTATCAGTTTGAGTTTTATGCTTCTGCAGATTTCCAGAACAGCAGGGGTCCAGAATCTTACCCGCTTGAGTATGATGTGGGCGATAAGATCTTCATGAAGATCGAGCCCGTCACTTCAGTCCTAAACACTGAGATCTTCCTCGAGACGTGTGTGGCTACACCTTACGATAATCCCAACTACCCCATCTCCTACCCCATCATCCAGAACGGatgcatTGTGGATGAAACAGTTCAGTTTTCTCCAGCCACCAACCATGTCCAGTTTGAAATGGAGGCCTTCAAATTCATTGGGTTCCATGACCAGGTGTTCATCAGCTGCTCAATCATCATCTGTCAGGTCAACAATCCCAACACCCGCTGCTCTCAGGGCTGCATCAACAGCACAGTCTCTCCACCGGCCCACCTCCATCGCAAAAGAGAGGCTCCCATCCAGACCGGCAGTCACTTCATCTCCCAGGGGCCCCTGCGGCTGAAGAGGAGCGCATCACAGGTCACCGCAAGCCCGGGTCTGAATCTGAACCTTGTTGTCGTCGCTGTTGGTCTTTTGGCAACAGTAGCCATGGTGTGTGGAGTGATCGTCTACAGAGCCCGAGCGCAAAGAATCAGATACCAACCTGTGCCATCGCACGACTTTTAGTCACGTCAGCTctgttgtttctttatttttcaaaacatgctATATTTTCCTTTATAAACAGAGAATTAGAATTGGTGTGCTTTGAAAGAGTTCTTATGTGAGTTGTTGGTCAAAGTGTGTCATAAAAGTGGAATATATCAGCAATCAAACTTTAGTTTGGGGACCGTACTATTAACTGTTAACTGTTAATTTGCTACATATTAGTAGTTGTTGAGTTTATTTAGGTAAGGTTAAGAGATCTAAAATATTGTCATTCAAAATATGGCATCAATATGTgctaataaatactaaaaacagccaatatgtttgttataagcaactagttaacagtGAAAATTGGTCCATATCTGATTAAACACCTTGAACAACTGTACCATTTATATAGTAGCAAATGTTTGATAATTAGCATCATTACTACAGTCtccagcgtcacatgatctgtcagaaatccttctaatatactgatttgcagctcaagaaacatttgtaattattttcaatactGAAAAgagttttgctgcttaaaatttGTGTGGAAACATTATACACTTTGTATTAGTGCCTTtgccaaataaaatatattaatttctcaaaaataaattactacaCCCAcattttttgattgattgattagaTAATTATGTTCCATAAAAGTGCAAGGGCAATGCATTAGTAAGAActgacatattaaatatatggaACATTTTACTTTACACTATGTGAATGGAGTTGATAAGTCGGTTTTGATTCCtgtgaattatataaaaatattaaactatcCATTTTAGTCATCAATTTACAACCAATTCAATTCAGTTATTTTGTGTAATTACTACAACCTGCACATAAGTCACTATGAGGTTTTTCTGATGCTTTTACAATTTTAGATGatgataaatacacattttatatttatcgCTGGTGTGTATTGGTATTTCTTTAAGGGGGAATATATGGAAACAGTGCcttgtttcttttaaacaacagtgtttactgcattttacattctgcattaaacattttgattca

Function

NR:

description
PREDICTED: CUB and zona pellucida-like domain-containing protein 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216817.1 True 4686 mRNA 0.41 14 19945146 19954199

Neighbor

gene id symbol gene type direction distance location
LOC122362767 LOC107561062 coding upstream 4333 19938028 ~ 19940813 (+)
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding upstream 9387 19928226 ~ 19935759 (+)
LOC122323160 LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982 coding upstream 36924 19903146 ~ 19908222 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding upstream 43668 19885134 ~ 19901478 (+)
LOC122362762 LOC101886557 coding upstream 319534 19624212 ~ 19625612 (+)
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding downstream 27262 19981461 ~ 19988814 (+)
cog8 cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188 coding downstream 40390 19994589 ~ 19999743 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding downstream 63175 20017374 ~ 20055307 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding downstream 147430 20101629 ~ 20118432 (+)
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding downstream 167457 20121656 ~ 20154452 (+)
G127637 golim4,LOC107662907 non-coding upstream 20344 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 318625 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 321864 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 368987 19575889 ~ 19576159 (+)
LOC122323166 NA non-coding upstream 376661 19487570 ~ 19568485 (+)
G127663 NA non-coding downstream 31542 19985741 ~ 19991636 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 248549 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 267105 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 302513 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 371131 20325330 ~ 20383758 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 656590 19269611 ~ 19288556 (+)
G127500 NA other upstream 1103611 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1292982 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 1381994 18559963 ~ 18563152 (+)
G127292 NA other upstream 1804893 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 48805 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 113479 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 591793 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 596949 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 635485 20589684 ~ 20600519 (+)

Expression


Co-expression Network