cog8 (cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188)


Basic Information

Item Value
gene id cog8
gene name cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19994589 ~ 19999743 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216832.1
agttttttgcgGGTTCTCGAATCAGCACTTCGATCATGGCCGCCGTAGACGTGGAAGACGAGAGCATCCTGGCGTCGATCTTCAAAGACAGCTTTCCCGAGAACTGGAGAGAGAAGCCGGATTTCGCAGCGTATCTGTCGCAGCTGAGCTCCTGCGGCGTGGACGAGCTGAACCGGGAGCCGGAGCGTCTGGCCGAGGAGCGGGCGCAGATCCTGCAGCAGACCCGGGAGCTGGCCTTCACCAACTACAAGACGTTCATCAGGACCGCGGACTGCACACAGCACATCTACACCGACTTCAGCACGGTGGAGAACTGCCTCTCCAAACTACTGCACAAACTCCCCGGCTTCACTGAGAGATGCAGAGGTTTCATAAAGGAGGCAGAGGAGATCAGCGTCAGCAGGAGAATGAACAGCCTGACACTGAATCGTCACACTGAGATCTTGGAGATTCTGGAGATCCCTCAGCTGATGGACACGTGTGTGCGTAACGGATACTACGAGGAGGCGCTGGAGCTCGCCGCTTATGTGAAGAGACTGGAGAAAAAACATTCATCGCTTCCTGTCATTCAGGGAATTGTGCACGAGGTTCGACTGTCTGCTCAGCTCATGCTGAACCAACTCCTTCAACAACTGCGCAGTAACACACAGCTTCCGGTTTGCCTGCGCGTGATCGGATACCTGCGCAGAATGGATGTTTTCACCGAAGCCGAGCTGCGCGTCAAGTTCCTGCAGGCCCGCGGAAGCTGGCTGCGATCCATTCTCGCGGCCATCCCGGACGAAGACCCGTACTTCCACATCACCAAGACCATCGAAACCTGCCGCGTGCATCTCTTCGACATCATCACCCAGTACCGCGCCATATTCTCAGACGAGGACCCCTTGCTGCCTCTCGGGGGTCAGGCGCTGAACGAGAGCGCCATCTTTCACGGATGGGTGGTGCAGCAGGCGGCGCACTTCTTGGAGACCCTCGATCGGGACCTCCAGCGCGGGGTTGGAAGCCGTCTGGACTCTCTGCTGGGCCAGTGCATGTACTTCGGGCTTTCCTTTAGCCGGGTCGGGGCCGATTTCCGCGGACAGCTCGCTCCTATATTTCAGCAGGTTGCCATGGAGACGTTCCGGAAGGCCGTTCAGGAAGCAGTGGACAAGTTCCAAGAGGATATGAACTTGTACACGCTCATTTCTCTGCCGTCGATACTCGGAAGCGCTATTCCTCCGGCGGTCCCGAGCACCCAGCCGGGCACACTGCAGCCCCCCATGGCCCTGCTGGATTTCCCTCCTCTAGCCTGCTTCCTCAATAACGTCCTGACGGCCTTCAACGACTTACGGCTGTGCTGCCCGATCGGTCTCGCACAGGAAGTTAGCAGATCTGTTGAGGAAGCCCTTATTAAGGTGACCAAGCTGATCCTGGTTTTCCATCGAGCTGAGGAATCTGCCTTCAGCAGTCGTGAACGAGAGTTATTCGTTCAGTTCTGCAGCGCATTTGCTGAAGACATGGTGCCTTTCTTGAACCGATGTTTACAAGTTCTCTTTCCTCCAGCCCAGCTCGCGCTCATACTGGGCGTCCCGCCAACCCAGGTTTATAAATACGGCAGTCTCGGCTGCATCAACGTGAACTCGGTTCTGGAGCCGCTGGAGTTTGTTCTGCCACAGAAGGAGCCCGTGACCTCTGTCCTGGATCTCTGCACTGATCTGAGCAGCCTGACCACAGCTGAATCTGATCCTTCCGCCACATTCGAACCCTTAACGCCTCAAGAAAAACCTGTACTACCCGAACGAGAGCCTGTGTCAGCATCTGATCCTCGTCTGTCTCAAAAAGAGGACTTATCTTCTGAAGCAGTCAGCACTGAGCAAAACAACCCGATCCTTGAGCCTCAATTGAACTTTGATCTACAAAACTCGACAGGACCAGATGATTTGTCCACAACAGATAATAATGttgagatgaaataaaaaaacactacattCGGTGTATTTTAGGGGTcctaaaaatatgcaaaattttTCCAAGGcttgattgcatttttatttggtgAAGGTAATAGTGTAAATACGGTGTCATGAAATAtggtataatatatttaaaatgtgaaaaaaaaaaattcatacgCTCACTGTTTATGACAGAGGTCCCAAAAAGCATTTGGACACTTAAAATATCTGAATAcctttgcattaaataataaatgccacttattttatttaaaaagagatGCACTTTCAGACAAAACATTAGATGATACGATTAGaatgaagacaaaataaaaattctgtttaagaataatttttatttttgggtgaattgtttttttaagtttaacttaTGTGTTCTTAAACATTTATCTGTATGTTCTTGTAATTAGACAATGTATTGCAtttgttgtatgtttttcatttgctcattttttCCAGGGTGTTTCGGGTTGGGGaaaggtttaataaaaaaaaaaaaaaaaaacatcaactgaTGATTAGGCTGCTTGTTTCTGAAATTCCCCATAAAACCTGCATGGAATACCAGACTGCCTTTGCAAAGTTTGATTTTATCTAGATCACAAAATCAAGTTAAATGTCAgaaatttgcacaaaaataacatttccgTATCACAACTTGGTACAAGAGTAGAATATGGAAAATACTTTGCAATATACAGTTAAACTTGATGTCAAGGGAAAAATGAAGCAGATTATTCAATAAAATtatcataaacattttaa

Function

symbol description
cog8 Predicted to be involved in intra-Golgi vesicle-mediated transport. Predicted to act upstream of or within protein transport. Predicted to be located in Golgi membrane. Predicted to be part of Golgi transport complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIh. Orthologous to human COG8 (component of oligomeric golgi complex 8).

NR:

description
PREDICTED: conserved oligomeric Golgi complex subunit 8

GO:

id name namespace
GO:0017119 Golgi transport complex cellular_component

KEGG:

id description
K20295 COG8; conserved oligomeric Golgi complex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216832.1 True 2717 mRNA 0.48 5 19994589 19999743

Neighbor

gene id symbol gene type direction distance location
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding upstream 5775 19981461 ~ 19988814 (+)
LOC122323149 LOC107561063,LOC107705779,LOC107686622,LOC107561062 coding upstream 40390 19945146 ~ 19954199 (+)
LOC122362767 LOC107561062 coding upstream 53776 19938028 ~ 19940813 (+)
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding upstream 58830 19928226 ~ 19935759 (+)
LOC122323160 LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982 coding upstream 86367 19903146 ~ 19908222 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding downstream 17631 20017374 ~ 20055307 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding downstream 101886 20101629 ~ 20118432 (+)
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding downstream 121913 20121656 ~ 20154452 (+)
LOC122362491 LOC107736106 coding downstream 155723 20155466 ~ 20160178 (+)
ptprq ptprq,LOC107705767,LOC107662847,LOC107564908,LOC107564907,LOC108413201,LOC107683214 coding downstream 160378 20160121 ~ 20197815 (+)
G127663 NA non-coding upstream 2953 19985741 ~ 19991636 (+)
G127637 golim4,LOC107662907 non-coding upstream 69787 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 368068 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 371307 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 418430 19575889 ~ 19576159 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 203005 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 221561 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 256969 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 325587 20325330 ~ 20383758 (+)
G127800 NA non-coding downstream 374111 20373854 ~ 20375835 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 706033 19269611 ~ 19288556 (+)
G127500 NA other upstream 1153054 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1342425 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 1431437 18559963 ~ 18563152 (+)
G127292 NA other upstream 1854336 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 3261 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 67935 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 546249 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 551405 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 589941 20589684 ~ 20600519 (+)

Expression


Co-expression Network