LOC122323160 (LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982)


Basic Information

Item Value
gene id LOC122323160
gene name LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19903146 ~ 19908222 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216839.1
CTTTAGCGCGCCGTTCATCCAGCATCAATGGGAAACCGCGTTATATTCCTTGTAAATAACTCAAATGCCAAAGGGACCTGCCAGAACCAACGGACATGTCCGAAAGTTCCTCTGGAGTGAACACCAGCAGTGAAAGTTTTCCCAAGTCTCACTCGCACTACTCCGAGTTAAGcgacacacacactcccttcTCGGTGGAACTGACTCCGGACTCTGGCGTTGTTGCCACTCCATTGCCGTCCAGCCGGTTCAGGTTTGCCTCGTGGCACTGGCTAGAGGAGCATGATGTGCGTGGAGACCAGCTCGCCTGCCCCAGGGTCAGAGAGGGGCCTGCAGAAGACGAGCTGTCCGTTAACAGTGAAGACATATTTCTCAGAGGAcgcaggaggaagaggagggaggATGAAGGACAGAAATGGGAGGAGAGACTCCAGGAGAACTGGGAGAACTGTGTGGTGCTGAACCTGTCTTATCAGGACCTGGGAGATCTGTACCAGCTGGAGAACTTCATCCGCATCCTGAGGAGACTGATCCGGGTGGAGCGGCTGCAGCTGGTGGATAACGCACTGAGAGATCTCAGCTCTGTCAGACTGCCAAGATGTAAAATCCTGAATCTTCACCGGAACAACTTGACGTCCATTCATCAGCTGCCAAAGGTTCCTGAGATCCAGCACTTGTGCCTGTCTGAAAACAGTATTTCGTCTCTGGGCGAGCTGTCCCTGCTGAGGAGCACACCGCTCCGATCTCTGACCCTCAAACGCAACCCCTGCCAGTTTCTGGACGACTACCGCTCACGTGTGTTCTCCTGTTTGCCAAAACTCCAAGTTCTGGACGGCATCCCAAAGCTACCGGAAGATTCCGTGCCTCCCTCTTCCCCGGCAGCGTCCAGATTTTGCACCATTCTCTGATGTTGAAACAACTGAACCTGAAGCCAAGATCCAGCGTACTGTACCGTCAGAGTGAACCGAAATGCACTTGTACATAGTTGCGTATTTACTCGCTCGAGCTCAGATTTATTTGTATGCCTtattaaagctatttttgtACCTCTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107561070

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216839.1 True 1052 mRNA 0.52 7 19903146 19908222

Neighbor

gene id symbol gene type direction distance location
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding upstream 1668 19885134 ~ 19901478 (+)
LOC122362762 LOC101886557 coding upstream 277534 19624212 ~ 19625612 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding upstream 299328 19600012 ~ 19603818 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding upstream 451935 19404321 ~ 19451211 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding upstream 514483 19380035 ~ 19388663 (+)
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding downstream 20004 19928226 ~ 19935759 (+)
LOC122362767 LOC107561062 coding downstream 29806 19938028 ~ 19940813 (+)
LOC122323149 LOC107561063,LOC107705779,LOC107686622,LOC107561062 coding downstream 36924 19945146 ~ 19954199 (+)
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding downstream 73239 19981461 ~ 19988814 (+)
cog8 cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188 coding downstream 86367 19994589 ~ 19999743 (+)
G127632 NA non-coding upstream 276625 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 279864 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 326987 19575889 ~ 19576159 (+)
LOC122323166 NA non-coding upstream 334661 19487570 ~ 19568485 (+)
LOC122323165 NA non-coding upstream 422925 19452530 ~ 19480221 (+)
G127663 NA non-coding downstream 77519 19985741 ~ 19991636 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 294526 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 313082 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 348490 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 417108 20325330 ~ 20383758 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 614590 19269611 ~ 19288556 (+)
G127500 NA other upstream 1061611 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1250982 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 1339994 18559963 ~ 18563152 (+)
G127292 NA other upstream 1762893 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 94782 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 159456 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 637770 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 642926 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 681462 20589684 ~ 20600519 (+)

Expression


Co-expression Network