ttc9b (ttc9b,LOC107756857,LOC107560155,LOC107662133,LOC107758251,LOC107657468)


Basic Information

Item Value
gene id ttc9b
gene name ttc9b,LOC107756857,LOC107560155,LOC107662133,LOC107758251,LOC107657468
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 891613 ~ 914612 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263906.1
GATCCACCAGTAGCAGCATCATCTCACGATTAATTCCTTCCCATAATGCCTCTCGCTAGTGCTCGCTGGCGCTGTCTGTGGTGCTGAAGCTGCTCTCGCCGGCGGCAAGAGTTCCCGTGCTCCAGCATCACCTCCGCGCAAAGGCGTTACGCGCTGGTCAGCGAGAGACAGCCGCGATCGCCTATTCCATCTGTCCCTTTAACGCGTTTTAATAGTCTGGAACCTCTAGCGTGTTTAGCTCCCCCCCTGGACCATACTCTCCGGTCGCGCTTGTGTTTTTCGGTTCCCGTTCGGCTCGCATCCTTTATGCACAGCACGCTGCTCCAGCCCTTAAAGAGAACACAGGCATCCGTGTCGGAACAGCATGGCTTCCTGAGCGAGATGGAAGCGAAGCAGCACTCGATCAAGAGCCTGAAAAGCTATCCGGAGGCTGGGGGCCGGAGTCTGGCGGCGGCGGCGGGTGGGGACGGCGGAGGTGGAGGGTATCGCGTCGGCGGCGCGGAGATGGAGATGGAGGCGAAAATACAGAAAGCGATCGACTTCAAACTGGAGGGTCACCGATGCTACAAGGAGAAGAAATTCCGGGAAGCTATTGGGAAGTATCACAGGGCGCTGCTGCAGTTGAAAGGGATCCACGTCGTCGACGGGACCACCGGATCCGAGGTGAACCTCCTGAACCAAGCCGCGGCCAAGCTGACGGAGGAGCAGCGGCGAGCGGTGGAGAGCACCGAGATCGAGTGCTACGACAGTCTGACAGCGTGCTTGCTGCAGTCTGAGCTGGTGAATTACGAGCGGGTTAAGGAATACTGTTTGAAGGTACTCGGACACCAGCAGGATCACTTTAAGGCCATGTATCGTGCAGGGATTGCCTTCTACCACCTGGGAGACTACGAGTGTGCCCTGCGTTACCTACGTGATGCCAAGTGCCGTGAACCCACAGACACAAACGTGCTGCGATACATCCAGCTGACAGAGATGAAGATGAGTAAGACCGGTCAGCAGGTGCGTGAGAGTGGGAAAGAGTCACTGGGTTAATTCAGCCCGACCCCCCTCTCCACGCCACACCCTAACCCTGATAGAAAACCTCTCTTCTCAAGTCTCTCCCCTTTTACCCACAATGCCCCCCTATCCCTTGGACAACCAGGATACACGTGCTGCGCCCCTCTCTGAAAGCGGACTCGAAACGGGCACAGCCACAGCACAGCACCCCGCGACTGTCTTTTCTCGCTCCGAGATTTCTCTGTCCCTTTAAATCCGACGTCCCCGGTGCTTTCGTTTCCCAGGTATTGAGAAATTGACCGATGAACAAAGAACACGAAGACGGAAAAAGAAGACATGCATCTGTTACAATGATATAAACAGCGGGGCTACggcattacagtttaaaattacaCGATCGAATGAGGATATGTTTTGAGTGGCAGAATTGAATCTGTTGGTAGAGAACAGAGTGAAGCACACGTATCAAAGCCACACTGCTACTTAAGCGCAGAAGATGAAGGTCAGTGATTAGGCTGGTGACCTTTGAACTCACTCTGATCCATTGAGAAGCAGTCTATCTACTCAATACAGAAGAGAAGCGGAGAGGTCGACGTTTAATTCAAGCTCATCTGCAAACGCCTGTTACTTTGtgtctcctttttctctctcttgaaTTTGGGCATATCTCAACTCAATTTCTGAACTGTTTCAATTCAAGGGCTAATTCAAGTGTTTGTGATTTGTCCTTTGATATCAATTTTGTTTTGCCTCTCGGTTTGCTGTACTATAGTGGTTTGAGCAAGTTGTTATCTGTCCCTTTTCTCAAAGGTACGACATCCTCTGTACTAATGTTAGCAGGTGTTTTGTGAACCTTGTTGTCCATTGCCCATGTACTGGACTGTCTCATAACCCCTCCCCCTTGAGAGAAGAGCGCATCCTGATGATGTCACAACGGTTACGCAGCCTGTTGGAATATTATTAACTAATGGAGCCATATCGAAAACTCCCGTGTTTCTGCAAGAAACAGGAAGAAGTGCTTGATAGAGGTCTGCTTAACCTACATAATATATCTATCCCAAAATATCAGTGTTACAAAACAGTGGTAAGTAAAAGGACAAAAATGCTCTGTCGACTCTGAGAATTGTAATTTTGACAACCATTAAGCATTACTCATTTGTCGTCTTCTCAACGTTATGCTTTTTTGAGCTTTGTTATGGAAGCCGCTGTTGTTTCGTTCTTCAAGGCAGCATCTCCGGTGGATTCATTTGAATGTGAAGACGCCTTTGACAGCACATGTCATTCTGAGTCTAGTTTGGATTAATGGCTTTGAGGAGATGGGGACAGACAGATGAAATTATCCATCTGACCTAATATAAGAGATTTAATTGTGTCAGTGGGACTCTGGGGACGTTGTGCCATGGTTTCAGATGAGAAGACACACTGATGAGATTCAGAACACATAGCAGACCGTACAACCAAATCTCTTTGTTGCAGTGACACTTGAGGCATACGGTGATCAAATAGGCTGCATTCAGttactctttctttcatttaaaaaaaagtttcatacATGCAGTGAGTAGAACTTTCAgtgaatataattaaaatgatgaatacTCACATGCTATTAAGACTCCAGTCATATCTTCTGATTTATTCCACATGGAGCCAGTGGCCTTCTCATGGGGCTTCCATGTCTAACAGTAATAAAGACAATGATATCGATAACAATAATTATTCGCTCACTATTATATAGTACTTTCTAGGTGCTCAAGGCACAAATGAATGGAGATGAAATGAACAGCGGATAATACACAAGCTTCATACATCCACACCAGTAGGTGTCAGTATATGCTTCTCTGGGATGAAAAAGAGCTGGTGAAACGTGAACAAAAAAACGTATTGAGTGCACCATTTAACACTCAAAACCACCTCTTGATAGTGTAGTCGTGAACGACAGGTTAGAGAAATCAAGTGATGTCTTTCTGTGCTGTTCTAACCCAATCTCATGAGGAAACGTAACTATTTTACGAAAAGTGCtgatttcacattcatttttaggATTGGCAAAGAGCGCaagatttttacaaaaaatgtccATGCCTAAACTCATTGAAAAACTAACCTTCAGCGAGACATAAGATGATCGGATGAAAAAGTAGAATTGAGATTTACCTACCAAACTGTCATAACAGCAAAATGTGAAATAGTTACGAATTTCCATGACAGTGCGTTGGCTCTTCTGAAGCTTTCCTCCTTTCCAGCTCTGTCTCTTGTCTCTGTTTTGTGGCAGTTCTCTCTCCACCTTACCTTTGATATGTTCCTTTGATTTCTGTAAATGGTAAAGGTCATTTTGTCTATAACAGAGCAATGCTGACAACACTGATGTCCCGTGAAGAATCTCGGTCATCACCTTTGCTTCTTTTAGCTGTGGTCCATATGTCCCCATGTGCTGGATCTCTTTCTACACAGACGGAGAATCATCAAATCTGACTGTTGTCAACAGACAACGACAAAAGCACAAACTGGTTTATGGACAAGCAAATAAACTTACTGTACTTTACTTTTTCTTGGATGTCACTTGAGGTATGTGTTTGTTGAATGTCAAAGTAGACTTGTGCGGTTTAAAGACATATTAAAATGGTTGTCGAAagctttactttattaaattgttttttatcGATATGTGAGAGAGCAAATGggaaaagacaaataaaagagatttatggaaaaatatatttaacattgtgAGGGGCAACTTTGTACCTGTGTATACGTTCAGTTTTCCTCTTGTATCTTGGATTATTTGTGATGTCTTAgccttgttttttgtttgattgcCAGTCTGAGGATTCGGGGTTTGCCCTTTGACCTCCAGAAAGTAATGTCTGGGGTGGGTCTGGAGAGAATGACAAGAGGGATTTTGCAGATGAAAAAGAAGGGGTGAGGGTACCCTACTGTCccgaaagagagagaaaatccactggtttctttttctttttttctcgcctgttctggagagagagagagactttgaCCCTCTGGTTGTTCTGGTTACtataatgttaatgcattacTGCGGTCATTCATTGCCTCTTTGGGAAGTACTGTACATACTTCCACCGGACATCAGAAGACCTGCAAAATGGTTATGTTTACCTGCAAGTCCAGGAATGCACTATTGATTGGTATTTGAAGTCtacaataaagtttaaaaagagaaaCCGTAA

Function

symbol description
ttc9b Orthologous to human TTC9B (tetratricopeptide repeat domain 9B).

NR:

description
tetratricopeptide repeat protein 9B-like

GO: NA

KEGG:

id description
K24930 TTC9; tetratricopeptide repeat protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263906.1 True 4211 mRNA 0.45 3 891613 914612

Neighbor

gene id symbol gene type direction distance location
c18h19orf47 si:ch211-160d20.3,LOC107657470,LOC107662134,LOC107758250,LOC107560146 coding upstream 2657 882948 ~ 888956 (+)
fosb fosb,LOC107757073,LOC107657472,LOC107560154,LOC107758249,LOC107662135,LOC108433461 coding upstream 11320 874687 ~ 880293 (+)
capn12 capn12,LOC107657473,LOC107757007,LOC107554500,LOC107560139,LOC107758230 coding upstream 29597 841411 ~ 862016 (+)
znf296 LOC107657474,LOC107554501,LOC107757154,LOC107758245,LOC107662139,LOC107560153 coding upstream 56263 824825 ~ 835350 (+)
siae siae coding upstream 78218 807366 ~ 813395 (+)
sipa1l3 sipa1l3,LOC107687359,LOC107554497,LOC107662132,LOC107758252,LOC107746578,LOC107560140 coding downstream 37286 951898 ~ 1019298 (+)
qpctla qpctla,LOC107758254,LOC107554496,LOC107746558,LOC107687360 coding downstream 108795 1023407 ~ 1028531 (+)
tbcb tbcb,LOC107687357,LOC107662130,LOC107758256 coding downstream 125524 1040136 ~ 1045127 (+)
nucb2b nucb2b,LOC107746563,LOC107656849,LOC107657662,LOC107554560,LOC107739429 coding downstream 454881 1369493 ~ 1376040 (+)
lmo2 lmo2,LOC107554475,LOC107746581,LOC107656846,LOC107739430,LOC107554555 coding downstream 494729 1409341 ~ 1413595 (+)
G123312 NA non-coding upstream 361994 529398 ~ 529619 (+)
G123301 ryr1b,LOC107676751,LOC107596888,LOC107758351 non-coding upstream 378981 511298 ~ 512632 (+)
G123282 LOC107676751,LOC107758351 non-coding upstream 415212 464104 ~ 476401 (+)
G123257 NA non-coding upstream 528577 361393 ~ 363036 (+)
G123472 yap1,LOC107758259,LOC107662128,LOC107746561 non-coding downstream 108493 1023105 ~ 1051430 (+)
LOC122323124 NA non-coding downstream 181851 1096463 ~ 1129331 (+)
G123491 NA non-coding downstream 317154 1231766 ~ 1236921 (+)
G123493 NA non-coding downstream 328750 1243362 ~ 1250048 (+)
G123511 NA non-coding downstream 462205 1376817 ~ 1379899 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other upstream 67938 814751 ~ 823675 (+)
G123243 NA other upstream 782781 108369 ~ 108832 (+)
tmem123 NA other downstream 130582 1045194 ~ 1054735 (+)
G123568 NA other downstream 650814 1565426 ~ 1571931 (+)
G123664 NA other downstream 1087174 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 1292587 2207199 ~ 2240260 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other downstream 1387146 2301758 ~ 2319140 (+)

Expression


Co-expression Network