ptprq (ptprq,LOC107705767,LOC107662847,LOC107564908,LOC107564907,LOC108413201,LOC107683214)


Basic Information

Item Value
gene id ptprq
gene name ptprq,LOC107705767,LOC107662847,LOC107564908,LOC107564907,LOC108413201,LOC107683214
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20160121 ~ 20197815 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263955.1
ATCTCACAGTGACAGCTGTCACGTCCAGTCGGATTGCATTGTGTTGGACTGCCCCCGATTCTACCCGTAATGCTCGTTTTGAGCACTTCATTTTACACTGGGTGGATCTAGTCTCTGGCAGAGGCCATGCCATTCGCTTGGACAAGATGAATCGGAGCGCTGTGATTGGTGGGTTGGCAGCGTATCATGCTCACAGGATCACAGTTGTGTCCGTCACGGCTCAAGGTGTGGAAAGCTCTGACAGTCGGTCCGTGACTGTTATCACAGaGGTTAGTCCTCCACGCCGGGTCTCGGTTGATGCTGTGGGGCTGGAGAACATGACTGTGTGCTGGTGGCCTTCACTGGACGAAGATGTTGGCAAATATTACATTCGGCTCCACCCACAAACAAATCAGGCTCAGACTGGTGAATTCTGGATAAATGGCTCCACCTGCATCTCGCTTACACAGCTCAAGTCAGGCGGGACATATGAAGTGGGAGTGGCTGCAGTGAAGGGAAGAAACATGAGCGTAGTGACAACCATACAACAGACTTTAAAACCTGATAGCATCCGGATAGCTGTCCCTTACAAAGTTGGCACACACTCTGTGGAGCTCTTTGTGCAGATGCCcagaaacagcatttatgaCGGCATCACCCTTACTTACCAGAATAATAAATTGTGGAGGCCAGTGTCAAAAGACAGCACTAAACTGTTAGTCGACAACCTGAATCCAGGAACGCAGTATgactttaatgtgtttgtgacCAGCAGAAACACCAGCAGTGAAGCCTATGCACTGCCACCTGTGAGGACCTGTTTGGCTCCTCCCACTCATGTGCGCGCTGGTGTTGTGACTGACAGCTCTGTAGAGCTCCTTTGGGATGGGGCTGAGGGGGCGGGCCATCATTATGAGGCGCTGTGTACGAACTGCGCTGATACTGTCATGGTGCAGAAGGTAGTCCACACTAGAGCAATTTTTAAAGATGTGACTGCAGGAAACCTATGCAACTTTTCAGTCCGAACCGAGAAGGAGTTTTTCAGAGACAGTCTGGCTGTGTTTATCACCATAAGATCTGCTCCCAGCCCGGTCACCTTGTTGCCAGTGCAGAGGACATCAGCGTCTCTCAGCGTGCGCTGGAGGGCCGGCCGGGGGGTCTGTGACTCATTTATCCTGTCCATAAGAAACTCAACCTTTATCCTGCAGACCAGTCAAAGTGCGTCTGATGACAGaACGTATCGCTTTGACAACCTGTTGCCTGGAAGTGTGTATACTGTTGAAGTGAGGAGTGTTAGCGGAGAAAGGCGAAGTTTACCCGCTGCTGTAAACACTAACACACTTCCAGAACCTCCTGATGACCTCACTTTCATTGAACAGGAAGTGAGCAGCATGTATGTGATGTGGACACGCCCACCGGGCAAAGTGGACGGTTACAGGCTTCAATATGGCTTTGCGGGTGACCTCCCTCTGCAGCACCAGGTTGATCGTCATGGCAACAGTGTCAGGATTCATGACCTGACCCCAGGAAGTGATTACAGGTTTGAGATCCAGTCCTTCCTGGGCTCAGATTTCAGCAAGACCACATCTCAAAACATCTCTACTAggcCAGCAGGTTTATGTTCACTCTCTGTGTCTGACATCAATGGGACGTCTGCAACAGTGTCATGGAAATCAGCCACTGGTCACTTTGATTTTTATAGAGTCGTGGTCAGTAACAGCTCTCATGTCTGGACATTAGATGTGAGTCCACACTCGCAGCAGGTCACTGTCAGCAGCCTATGGAACGGCTGCTCGTACAACATCACTGTACAGCGCTTCAGAAACAACGTCAGTGGAAACGCCGCCACAGTCACCATACATACAGtCCCTGAGAGTCCTGAGGGGTTGCGAGTGATAAGCATGTCATCTCGTGCTTTTTCACTCCACTGGTTGGCATCACCTGGATGTGATAAGAAGTACATGGTCCAACTGCATCCTGAACACGGCAATATCAGCATCTCCACCACCACAGCAGACGGCGGTGTCCAGGCTCAAGTGTCCAGTGTAACCCCTGGAACGTCATACACTGTGACGGTCAATGCGATGGCCTCGTCAGGGTTCAGCTCACCTGTCAGCCGAATACTCGTCACCACTAATGAATCCTTACCTGCGGCCCCCTCTAAGCCAGAAGGTGAACGGGTCGGTTCCACTGGGATCCTGCTGTCCTGGCGGATGCCTCTCGACCCCTCAATTCACTCATTTGTCATCAGATACAAGGAAATGTGTCCATATCCCGACCCTACCTTCACTGAGGTCACCAAGAGCCTGGATATCCCAGAAACCCTGCTGAACACACTCACCCCTGGAGCGACGTACAACATCAAGGTTGCAGCAGTAAACAAGGCAGGAATTGGACCTTTTAGTCAGTCTCTGTACTACAAAACAGCAGAGGCCCCTCCTGGTCTGGTGTCAAACCTCACAGCGTTCGCCGAGGATCACACGTCGGTGTTAGTGACATGGTTTCTTCCCGTACGCATTAATGGTCTCATTACTAAGTTTGCAGTGAAAGTCAAACATGCTCGAACCGGCATGATCGTTCGCACGCTCGAGCTTAACGCAGAGGACATCATGAACGGAGCCCTGCCTCACTGCAACGATGCAGCAGACATCTTATCTCGTGGAACTCCAAGCCCGTCTCAGTCTTCCCAGCTGACCTCTGCCGTGCTGCCCACTGTTACTCTCTCAGCCGTACCTCCCGCCTCCATCTGGAGTGTTCCAATCAGCGTGAAGATTGATGAACTCCGCCCCTACACTCCCTATGTGTTTGAAGTCTCCGCCTTCACCAGTGATGGCGAGGGCCAGATCGCCAGCACTATGGTCCGCATGCCAGAGGCTGCCCCCGAAGACCCGcctcaaaatgtaattttcacaaACATCACTTCTAAATCTCTGTCTCTAACTTGGGAAACTCCAAAGATCACCACAGGAAGGTTCAGTTACGTCATCCAGCTCCACAGCTCTGAAGggatTATTAGTGAGAACAGCACAATCGAACTGGCATTTATGTACACTGGACTTACTCCATACACCAAATACTATATCCATGTGATGGCCAAATCAGCAGGGGCCACAGGACCGGAAGCAGTGGTCAACATTACAACACTAGCAGAAGCTCCGAGTGCTGTGTCTCATCTGACAGCAGAGGCTGTGGACTCCACTGCAGTCCGTCTGTCCTGGAGACCTCCGAGCCAACCGAACGGACTAATCACACACTATCGGATACGAGTGTTATACCGCATTACTCTTGTACAGGACATCACCCTGCGAGGACAGAATCCTCCACTTCGTCGCAATGCAAGGTCACTTGACATCACCACATCATCTGCGTTCATTCTCACCAACACTGATACGgaactgacctctgacctccctCTGACCCCGAGCACCCCTCACACACCTCCACCCTGGCTCACAGTGACCCACGACAGAACTGATGTATCTGTTGAAGCTGTGACTGAGGAACCGGTCACTATAGGAACTGATGAAGCACCATTGGTTAATTTAAGCCCCTCCCCGGCCCGCCGTTTCACTAGGGCGGTGGCCACAGACTCCACCCAGCAGCAGACCAATCCCCCAACGAGAGCTGCCACCACTATTGGAATAGAGGTCCTACCTGCCACTGAGGAGACAGCAGACCTGTCATCTGACCACATCATGTATGTAGTTAGAAGACTGAGTCCTTTCACTGAGTACACATTTAGCGTGACAGCAAAAAACACCATTGGAGAAGGGCCTTCCACAGAAGTTAAAGTGAAAACAACTGAACAAGTGCCCAGCTCTGTTCAGAATGTGTCCTATCAGAACCTGACCTCCACCTCCATCCGTGTTACTTGGGAGCCGCCACTGAACCCTAATGGCAAGATAACTCACTACACTGTATATGCCCAAAATCTCCTTACAAAGCAGCAATTACAACAGATGGCGAACACCACCACTGCAGTGCTCACAGGTCTGGACAAGCACAGCAGTTATAAGGTGTGTGTGACCGCATCTACTGCCGTGGGGGAAAGTCCACTAACTAATGAAGACTACATCTTCGTCATGACACTAGAGGATGAACCGGATTCTCCCCCGCAGAACCTGACAGTCATAAAAACCACTTCCTCCACTTCTACTCTCACCTGGTTTCCGCCAGAGAAACCCAACGGCATCATCCGCCTGTATGAGGTCTCCTACACCAACGGCACATACAGCAACACAGTCAACAGCACATCACCTACTGCCACACTGCGCTACCTGAAGCCACACACACGCTACAATGTGACTGTCCGTGCGTTTACGCTACACGGACACGGGAACCAGATTTCTGATACTCTACAGATGCTGTCGGGGGAGGATGTGCCTGGCAGCCCCCCTTATGATTTGACCTATGAGAACATCGGATCCAGCGAGGTGAATGTGTCATGGTCGCCGCCGCTTCTCGCAAATGGCATCATCTTGTTCTACAACGTGGAATACTGGAACGCCACACACAGTCTGAACCAAACCACACACGTGCCTTATGTCATCCTGTCCAACCTTCGGAAGTATGCACGCTACCGTATCAGCGTACAGGCCGCCACACAGGTGGGCTTGGGAAACCACACGAGTGAGATCCTGAACATCACCACGCTGGAGGACGTGCCGAGTGGTCCCGTCCACAACCTGACTGCTGCAATCTATAGCTCTACGGCTGTAGTGATCAGCTGGGATCCTCCTCTGGAGCCCAACGGCAGAGTCTTCTATCAGCTGAGCCTCCAAGAGGCGGGTATGACCCACTCGTCCATCAACCGCACGGTCAACATCACCATCACCAAAACTACCACGGACAACATTTACCTCTTTACCAAGCTCAGGAAGTATTTTCCCTACACCATAAAAGTCACCCCAGCAACCAGCGCAGGGTCGGCCGTAAACCACACTGCAATGCAGCACCTGCGAACAGATGAAGATGTCCCAAGTTCTCCTCCGTTGCCTGGAGCTAGTAAGAATCTCTCCAGCACCTCCATCCATGTGTCATGGTTCCCTCCTGTGGAAGCCAATGGCGAGATCATAGATTATGCTGTAGTTTTACAGGGTCCTGGGACCATCAACAAAACATACACCACTGAAACACACCTAATGCTCTCAGAACTCACTTCATTTACACCTTATAATCTCTCCATCGCTGCAGTCACCCGTATAGGTGTTGGGCCTTCCGTGATTATTCCACTGCATACTGATGAAGCAGTCCCAATGTCTCCACCACGCaatctgattatttttaacCACACTGTGAATTCAGTGTGGCTTCAGTGGGAACCAAGTCCAGAGCCAAATGGAGTCATCCAGCACTACGGATTCCGAATACTTGAACTGAACACATACACTTTCAGCTATCAGAACTCATCAGATGCATCCACACAAGCAGAACTGAGTGACTTTAAACCTCATAATTCATATGAAATCAGCGTGTGTGCATTCACTAGAGCAGGGAATGGGGATCAGTATAGCATGCCTGTCATATTCACCACCAATGAATCAGTGTCAGATGCCGTCGGGAATCTGACCTGCTCTGGATTGGATTGGAATTCAGTGTACATGGAATGGGAGCTTCCGATTCATCCTAACGGAGAGATTCTGTACTACCTCATTCGCTCTGGAGATCTAGAGGAGGAGGCTCATCCTCTCGTGCTCACAGACACGGTGGCACACACATTCATCGGCCTGTCGCCTAATGTTTTCTATGTCATCAGCGTGGCTGCAGTTAATTCAGCCGGAACAGGGGAAGAAGCCAACTGCACCGCACACACTCCACCAGAGTCAGTCCCTGGTCCGCCCCAGTCCCTGACCATAATGGATGTGACCTCTGACAGTGTGTTTTTAAGCTGGCAGCGTCCCGTCCATGTTCCTGGTCTGTTGCAAGGATATAATGTAGAGATTCAGCAACTGGCAAGAAGTTGTGAGCCAGAGCAGCACAAGGAGTCCTGTGTGGACAGTGAGCTTGTGGAGTGGGTTGAAGGAGAAGCCAGTGGGGTCACGCTTTCCCCTCTGATGAAATACAGAGAGTACCGTATCAGACTGGTTGCCTTTACCAGAGCCGGAGCCGGAGAACCCTCCAAATGGatccacacacagacactcgcAGGAAACCCCGATGCCCCCCCTGGTGCCATATCAGTGGTTCCTTCTCCCACTGGGTTAAAGATTGTGTGGAACGAACCATCAGTAATCTCAGGTCCCACCTCATACCTCATTGACATCACTGCTTTGGATGGTTCGGGATATAACATAAGTCTTGTACGGTATTCAGAGGAGATCAGGGCGGTGGTAGTCGGGAACCTCACTGCATTTACCTTGTACTCTGTTATCATTACCGCCTTCACGGGGCAGCTTTCCAACGCTCGCACAGACGGCAAAGCATCCAAAGCCATCCTCGTCAGAACCCTGGAGGATGAACCCAAAGACCCTCCCAAAAACGTGACATTGACGGTGATCCCAGAGGAAGTGACACGTGTTTATGTAACATTCTCTCCACCGAATGAGCCGAACGGAAACATCAGTGCCTATCACGTCGCCATCTATCGAAATGGACAACTGGACTTCTACATTAACAGCCTGTCTGTGATCAGCAATCCTAATAACACTATGACAGCCATTATAGATGGTCTGAAGGGTGGATTCAATTACAGCATAAGGATTGCAGCTGTGAATGGAGCCGGTTTAGGACCAAGTTCGGAGGTTCAGGTCACCACAGGTGTGAAAGCACCACCAAAACCATCCCGGATGCCCCGGGCTGCTCTGAACAACGCAGGTGTCATCATCTCTACTTCAAAGACCATCACCATTGAAATGCCTGAATGCTTCTTCACTGATGACCATGGACCAATCCAAAAAGTCCAGGTCATTGTTTCTGAACCGGcagTGATGGACTACGGGAATCTGTCCAACTGGAAGAGTGTTTTCCTCTACCCTACTGCGCCATACCTGACCGACGAGGGCTTCGTGAACCCAAAGTGCTCGGAGAAAGCAGAGCGCATGAGCACAAACACTAACACATACGTTATAGGAGCAGATGATAGCTGCCTGTCTGAACAGGCCAAGACACTTTGTAACGGTCCCCTCAAACCCAAAACATATTATGTgtTCAAATTTCGGGCAACAAACATCCGTGGGCAGTACACAGACTCTGAGTACTCAGACAGGGTCAGAACTGCAGATGACCGCCTGCTGACCAGAGATGAGCAGATCATTCTTGGGGTCCTGCTGTCATTTTTCCTggcattgtttttaattctgCTTATATACGGGTCTGTGAGGATCCACCGCAGGCAGAAGGAAGGTGGGACGTACTCTCCACGCGAGGCTGAGATCATTGAGACCAAGTTCAAGCTAGATCAGCTCATTGCAGTGGCCGACCTAGAGCTCAAAGAGGAGAAGATTAACCGGTATTCCTCTTTTTTCTATAGAAGGAAGGAGATTTTTGTCATCCAGCTGCTAAGTTACAGGAAATCTCTCAAGCCAATCAGTAAGAAATCTTTTCTTCAGCATGTGGAAGATCTTTGTGCCAACGACAATGCCAAGTTTCAAGAGGAGTTTGCTgagctGCCGAAGCTGCTTCAGGATCTGGCCACATCAGACGCTGACCTGCCGTGGAATCGCTCCAAAAATCGCTTCACAAACATTAAACCctatAACAATAACCGAGTGAAGTTACTGTCTGAGCCAGGAATGCCGGGGTCTGACTACATCAATGCCAGCTTCGTCTCCGGCTATCTGTGTCCTAATGAGTTTATAGCCACTCAGGGTCCTCTGCCTAGTACTGTCGCAGACTTCTGGAGGATGATTTGGGAGACCGGGACCAAAACCATCGTCATGCTCACTCAGTGCTTTGAGAAGGGccggATCCGCTGTCATCAGTATTGGCCAGAAGACATAAACCCGTCACTGTTTTTGCTGACATCATAATCACTAAACTCACAGAGGATGTGCATCCTGATTGGACGGTCCGGGTGCTCAGAGTG

Function

symbol description
ptprq Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 73 and autosomal recessive nonsyndromic deafness 84A. Orthologous to human PTPRQ (protein tyrosine phosphatase receptor type Q).

NR:

description
PREDICTED: phosphatidylinositol phosphatase PTPRQ-like

GO: NA

KEGG:

id description
K16910 PTPRQ; receptor-type tyrosine-protein phosphatase Q

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263955.1 True 8002 mRNA 0.51 48 20160121 20197815

Neighbor

gene id symbol gene type direction distance location
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding upstream 5669 20121656 ~ 20154452 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding upstream 41689 20101629 ~ 20118432 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding upstream 104814 20017374 ~ 20055307 (+)
cog8 cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188 coding upstream 160378 19994589 ~ 19999743 (+)
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding upstream 171307 19981461 ~ 19988814 (+)
wash1 wash1,LOC107564895,LOC107686618,LOC107662897 coding downstream 32339 20230154 ~ 20238801 (+)
fkbp4 fkbp4,LOC107686573,LOC107705800,LOC107564896,LOC107662895,LOC107735478 coding downstream 52587 20250402 ~ 20256447 (+)
b4galnt3b LOC107705801,LOC107686572,LOC107564911,LOC107735491,LOC107662894 coding downstream 61954 20259769 ~ 20278496 (+)
c2cd5 c2cd5,LOC107686569 coding downstream 88650 20286465 ~ 20311133 (+)
lmf2a lmf2a,LOC107564898,LOC107686567,LOC107600131,LOC107662891,LOC107735523,LOC107705770 coding downstream 113964 20311779 ~ 20321200 (+)
G127663 NA non-coding upstream 168485 19985741 ~ 19991636 (+)
G127637 golim4,LOC107662907 non-coding upstream 235319 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 533600 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 536839 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 583962 19575889 ~ 19576159 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 4933 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 23489 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 58897 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 127515 20325330 ~ 20383758 (+)
G127800 NA non-coding downstream 176039 20373854 ~ 20375835 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 66520 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 144415 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 871565 19269611 ~ 19288556 (+)
G127500 NA other upstream 1318586 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1507957 18646362 ~ 18652164 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 348177 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 353333 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 391869 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 437030 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 2203129 22400944 ~ 22411957 (+)

Expression


Co-expression Network