LOC122362491 (LOC107736106)


Basic Information

Item Value
gene id LOC122362491
gene name LOC107736106
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20155466 ~ 20160178 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263956.1
TTGCTCTTATGACCACAAAGACTGTTTTAGGATGCTGCTGAAGTTTGACTGACCATACTATTGTAGTGTAGGTTATTATTACAGTGCGAGCTGCAAGGCTAAAGAGCGTAGCGTTTTGCTTTAAGGATATGATGCCGTCTATGGATACTGGAATTATGGGATGGAGCTCCATGGACAAAGTTCTGGCATTGTTTTGGCAACTTCTGCACTTCTTTCAGGCTTTCAGCCTTCCATGTTCCAGAAGTCCATCCTCTGTCCATGTGCAGGTGGCATTTCAGTGTTTTCCATCCCGGACAGATcatttttatacactttttttggGAAACAAGGTTCTGAGCAGTACAGCAGTGTGTGaagatgtgtgtgaatgtgtgatgAAGTTCAGGGTACCACAAGTTTCTGAGAAGCTGGAATTCAGTCTACAGTCACACAATGGCACAGAACTGCTGGATGCCAAGACTTTCCACTTTGCTCCTCTCATGACATCCTCTTTACGCATGAATGTCTCATCCACGACTGCCGTGCTCAGCTGGCCTACTTTAGATGACGGAGATGTCTTGGATGTGTGTTTGGATAAGCACTGTTGGGTTGTGTCCCGTTTTCAGCCATTCCACCAGGTTACAGGGTTACAGCCTGGCCGTCGTTACAATGTCAGTGTGgcaaagaaaacattcatcccTCATCTCCAAATTAATGTCACACAAAGCCATCAGCTGGGTATAAAGACAGGTCTGTGTCCCGCTGGCTGGCATGCTGTGGGATGGAGCTGTTATAAGGTGAACCTGATGTTCCTGCCATGGTCTGGAGCGAAGCAAGAGTGTGAAAGATCAACCCCAGGGTCGCATCTGGCCAACACAAAGACAGATGCAGAGTTTCTATCTGTCATATCCTTCTTAGAATCCTATAACCATCTTCAGCTGTTGTGGACAGCTTTAAATGACCGTGAGACAGAAGGTGATTTCCGCTGGTCTGATGGCTCAAcctataatttaaatattgaaatgacATCATCGCTTGCATCCAATCAAACGGGCTGTGTTGCGATGCAGAAGAATGCGACCGAGTGGGATTCTTCTTCACTGCTTTCCTGTGTTCCCTGCAGTTCCCCTATATTTGTCAAGAAGAGTTGTCGCAGAGCAGCGGTGAATGGCTGTAtttggagagtgtgtgtgagacagaagCAGTGTTTATCTGGTCAGATGTATCTCACCTGGATTTATCTGCTGGTTTTACGCTTGCTCTACAATCAGAAGATGATTCAAAGGATCCAACCGTCTCACGTGTGGTGCTCACAAACACTCAAGACATAGTGAGAGTTCAAGGTCTCTCTCCTGGACACGTCTATCATTTCTCACTGGTTCTTAAACGGCCCAGTGGGGTGTCTCAGACACTTGGGCCCATTTTTATTGCCAATACAAAGCCGAATCCTCCTCAGAATCTCACAGTGACAGCTGTCACGTCCAGTCGGATTGCATTGTGTTGGACTGCCCCCGA

Function

NR:

description
PREDICTED: titin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263956.1 True 1494 mRNA 0.46 8 20155466 20160178

Neighbor

gene id symbol gene type direction distance location
otogl otogl,LOC107736094,LOC107686601,LOC107662850 coding upstream 1014 20121656 ~ 20154452 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding upstream 37034 20101629 ~ 20118432 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding upstream 100159 20017374 ~ 20055307 (+)
cog8 cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188 coding upstream 155723 19994589 ~ 19999743 (+)
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding upstream 166652 19981461 ~ 19988814 (+)
wash1 wash1,LOC107564895,LOC107686618,LOC107662897 coding downstream 69976 20230154 ~ 20238801 (+)
fkbp4 fkbp4,LOC107686573,LOC107705800,LOC107564896,LOC107662895,LOC107735478 coding downstream 90224 20250402 ~ 20256447 (+)
b4galnt3b LOC107705801,LOC107686572,LOC107564911,LOC107735491,LOC107662894 coding downstream 99591 20259769 ~ 20278496 (+)
c2cd5 c2cd5,LOC107686569 coding downstream 126287 20286465 ~ 20311133 (+)
lmf2a lmf2a,LOC107564898,LOC107686567,LOC107600131,LOC107662891,LOC107735523,LOC107705770 coding downstream 151601 20311779 ~ 20321200 (+)
G127663 NA non-coding upstream 163830 19985741 ~ 19991636 (+)
G127637 golim4,LOC107662907 non-coding upstream 230664 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 528945 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 532184 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 579307 19575889 ~ 19576159 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 42570 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 61126 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 96534 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 165152 20325330 ~ 20383758 (+)
G127800 NA non-coding downstream 213676 20373854 ~ 20375835 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 61865 20067678 ~ 20093601 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other upstream 139760 20003004 ~ 20015706 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 866910 19269611 ~ 19288556 (+)
G127500 NA other upstream 1313931 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1503302 18646362 ~ 18652164 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 385814 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 390970 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 429506 20589684 ~ 20600519 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other downstream 474667 20634845 ~ 20641059 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 2240766 22400944 ~ 22411957 (+)

Expression


Co-expression Network