kcnj5 (kcnj5,LOC107725067,LOC107558569,LOC107709561)


Basic Information

Item Value
gene id kcnj5
gene name kcnj5,LOC107725067,LOC107558569,LOC107709561
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14752182 ~ 14775393 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263957.1
CAGTTGCGTAAATCTCAGCCCGCAGAATGCAACTCGTTGTGCGCTAGGATGCTTCCACGCACACGCAAGTACGGAAAGGACAAATCCTGCGAGGGGAGACGGAGGAGCAGGGGGCTGTGGGGGAGGAAACATCCTCTCATGCTCACTTTCacatccctccctctctctctttctctcactcgcTTGCATCCTCCAGGAGAGCGAGGTAAGGAGGTGGTGGAGCGCTGTGTGAGCCGAGGCAGTGAGGCAGCTGAGATGAGCACATCAGAGCTGGAGTCAGAACAGAGCGCAGCTGCCCTAACATGCTTCCCTTGACACTGCACAGCTACCTCTGCGCTCGAATGAAGGTTTGCAGTCGAAGCTGAGGATGGCAGGAGATTCTCGCGTCCACATGGACCACGACATGGAGATTGGAGTAACTCCAAGAGAGCAGGTGAAGAAACTCCCCAAGCACCTGAGGGAAGCACAAATACCCACAGATCGCACCCACCTCATCTCTGATCCTGTTAAGAAACCCCGCCAGCGCTACGTACAGAAAGACGGCAAGTGCAATGTTCATCACGGAAACGTTCAAGAGACCTATCGTTATCTCAGCGACCTCTTCACAACACTGGTCGACTTACGCTGGCGCCtcagtttctttattttcacCTTGGTCTACGTGGTCAACTGGCTCTTCTTTGGGTTTTTGTGGTGGCTTATCGCGCTAATACGAGGAGATCTTCTACACGCAGATGAAGAGGGCTGGACCCCTTGTGTTGAAAACCTCAACAGCTTTGTCTCGGCTTTTCTCTTTTCCATCGAAACTGAGACCACCATTGGTTACGGCTATCGTGTCATCACGGAGAAGTGCCCAGAAGGGATTATACTTCTATTGGTGCAGGCCATCTTGGGGTCCATCGTCAATGCCATGATGGTgggctgcatgtttgtaaagaTCTCGCAGCCCAAGAACCGAGCAGAGACGCTGATGTTCTCCCACAAGGCTGTGATCTCGGTGAGGGATAACAAGATGTGCCTGATGTTCAGAGTGGGTGACCTGCGCAATTCGCACATTGTGGAAGCGTCAATCCGTGCCAAACTCATTCGTTCACAGCAGACGAAGGAGGGCGAGTTCATACCTCTCAACCAGACGGACATCAACATTGGCTTTGACACAGGAGACGATCGCCTCTTCCTGGTATCGCCTCTTATTATCTCTCACGAGATCAATGAGAAGAGTCCTTTCTGGGAGATGTCCCGGGCACAGATGGAGAAGGAAGAGTTCGAGATTGTCGTCATCTTGGAGGGCATGGTCGAAGCTACAGGCATGACGTGTCAAGCGCGCAGCTCCTACCTGGACTCGGAAGTGCTGTGGGGCTACCGCTTCACCCCGGTGCTTTCTCTGGAAAAGGGCTTCTACGAAGTCGACTACAACAACTTCCACGACATTTACGAGACCAACACCCCAACCTGTAGCGCTAAAGAACTGTCCGCTCGATTAAAAGAGAGCCCTCTCCTGCCTCACCTGCCTCTCCTCAGCCCCGACCTCAGGCAGCACACAGACCCCTTCTCCAGCCAGACCACACAGGACGAGCGGGAGAAAGACGACGAGAAGCCCGCGGAGACCAACAACGGCTCTGCCAACCGCTTGGAGGAGAACCCTTGAAGGAAACCCTGCTCCGAACTGACTCAAGGACTCAGTCTGTAGAGACTGGCAAGCTTCTTTCCCCTCGCATGGAGAAATATCCTTGCAATAGCCATGCAATATGACCCCCGATTCCTCTAGAGAGCCGAGCTGATGTGTAGATCGAGGTTAGACGCACAAACAGATGAGAATccgtatatatttatacacctaCGCATACTACACatattttagctttataaaCTCTGTTGTGCAGATTTTCATGGTATCAGTCAACGCCCTGTACCTCAAGGACAAAATAGTAGCCATATACTGTATGACCCAGAGGTCAAACCCCTTAATCTAACCATAGCAAATCAGCTTTAATAGAATCCCAATGCAAAGACTCTTAGGAGCCGAACACAGTGCTTGCGTGATTAACCACCGCGAAGGCCCGCGACGTTGGTTCCTTTAAGCTATTCTATTGTATGTTTTATCTGCattataattatgcattataattatcGATTTCCCCCTCATATTGAAGTGCAtgtgtttgaatttgatgcaaGAGTGATGCTGGAAAACGCACCAGACTAAAGCACAACCGCTGCAGAGGCAGATGTATGGTTTGAAAGCCTGCAGTGCACTAAAATAGCGGCGACGAATGGAAATATCGCACATGCATTGTCTCTGTGAAGTTCAATCTTGCCCGGTCCACGCTCCTGGACTCGTATTTCGTCTCTATCACATTTGATTTGTGTGCAAGTTTGAGGCCACGCGCGTGAGACTGTCAGTCGCAATTTCCAAGCGGCCCAAAGAACTGCGTTTCAAAAGCATGAACCCTAAGGCAAGTTCTACACACTTTCTAAACAGGGTATTTTCTAAGGCATGCAGACTTCAAAAACTCAAACACTTTCTACAAACAATTGTACAGTTAAATTCTGGGTTAAGGTGAGGAGAGAGCTCCATTCACAGCAGAGACAACGGTGCAGTattttaaagatgcattttaGAGGAAACTCACCTATGACAAGTCATTTTCACAGAATAATATTATATGCAGgctatttacataaataaaataaataaagaaactta

Function

symbol description
kcnj5 Predicted to enable inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in atrium and cardiac ventricle. Human ortholog(s) of this gene implicated in atrial fibrillation; long QT syndrome 13; and primary hyperaldosteronism. Orthologous to human KCNJ5 (potassium inwardly rectifying channel subfamily J member 5).

NR:

description
G protein-activated inward rectifier potassium channel 4-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K04999 KCNJ5, KIR3.4; potassium inwardly-rectifying channel subfamily J member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263957.1 True 2707 mRNA 0.49 4 14752182 14775393

Neighbor

gene id symbol gene type direction distance location
fli1 fli1,LOC107692484,LOC107656981 coding upstream 24295 14704160 ~ 14727887 (+)
smtla LOC107709547,LOC107590731,LOC107692520,LOC107656966 coding upstream 168928 14578170 ~ 14583254 (+)
barx2 barx2,LOC107670639,LOC107692488,LOC102779973 coding upstream 604995 14130499 ~ 14147187 (+)
rbm7 rbm7,LOC107755678,LOC107739154 coding upstream 625338 14123396 ~ 14126844 (+)
LOC122323172 LOC107560134,LOC107692493,LOC107733301,LOC107670597,LOC107717611,LOC107602107 coding upstream 878917 13870029 ~ 13873265 (+)
bmp16 LOC107566293,LOC107692530,LOC107709563,LOC107577119,LOC107725066 coding downstream 67818 14843211 ~ 14850376 (+)
ppp1r37 ppp1r37,LOC107692481,LOC107566290,LOC107709550 coding downstream 96375 14871768 ~ 14901407 (+)
shkbp1 shkbp1,LOC107692479,LOC107724139,LOC107656962 coding downstream 135651 14911044 ~ 14921023 (+)
si:ch211-136a13.1 LOC107727474,LOC107566284,LOC107692514,LOC107722278,LOC108264834,LOC108435511,LOC106580732 coding downstream 276651 15052044 ~ 15064838 (+)
yif1b yif1b,LOC107566288,LOC107564401 coding downstream 291469 15066862 ~ 15072223 (+)
LOC122323060 NA non-coding upstream 8738 14740786 ~ 14743444 (+)
G126285 NA non-coding upstream 281167 14470760 ~ 14471015 (+)
G126262 NA non-coding upstream 309679 14375565 ~ 14442503 (+)
G126251 NA non-coding upstream 631332 14120193 ~ 14120850 (+)
G126243 NA non-coding upstream 683311 14068604 ~ 14068871 (+)
G126347 NA non-coding downstream 156928 14932321 ~ 14984748 (+)
G126345 ltbp4,LOC107724163,LOC107566282,LOC107692515 non-coding downstream 161532 14936925 ~ 14937634 (+)
G126458 NA non-coding downstream 290953 15066346 ~ 15066577 (+)
G126591 NA non-coding downstream 985570 15760963 ~ 15820330 (+)
G126605 NA non-coding downstream 1050034 15825427 ~ 15828353 (+)
G126146 gramd1bb other upstream 810813 13940095 ~ 13941369 (+)
G126175 NA other upstream 839382 13909564 ~ 13912800 (+)
lbhl lbhl other upstream 882850 13861871 ~ 13869332 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other upstream 1046068 13670289 ~ 13706114 (+)
gemin7 NA other downstream 51395 14826788 ~ 14828292 (+)
LOC122322993 LOC107709552 other downstream 131223 14906616 ~ 14910157 (+)
LOC122362588 NA other downstream 259990 15035383 ~ 15047893 (+)
LOC122362954 LOC107740354 other downstream 1175589 15950982 ~ 15953653 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other downstream 1271676 16047069 ~ 16055627 (+)

Expression


Co-expression Network