LOC122362522 (LOC107670367,LOC107559271,LOC107673148,LOC107738440,LOC556054,LOC108414180,LOC108264794,LOC101481124)


Basic Information

Item Value
gene id LOC122362522
gene name LOC107670367,LOC107559271,LOC107673148,LOC107738440,LOC556054,LOC108414180,LOC108264794,LOC101481124
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 22241472 ~ 22261969 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264010.1
CAGCCGGTCAGAGGATGGAGGCGAGCTGAAAACACGTCTCATTGGCTCCCGCTGCTCCATTTAAAGGAATCCAACTGGTTTGTCCTTTAAGATCGTTCAGCATCTCGTAAGGGCAACTTTAAACGTTCGCTATTATCTGAATGGGAGCGTGCGTTTTGGAAGATCCGATTTTGAGCCACTTTTCTATACAGTCTACGTAAGAGAAGCTCATCGATGATCGACGAACGATTTAAGAGCAGCAAAAAGCAGTGTTTCTTGCCTCGCTGAAGTACCGGGCTGTGATAAAGAGAAAGATTTCCGGGGCGCGCGAAGGATCTTTAAAGCGTTACTTAAAGGGACTTTATTCCAGATCTAAAGGATGGAGATATAAATGATTAACACTTATATCGATCGGCTGATCTAATAGCCTATTACTCGAGTCGTGGAGCGATGGGGCGCTTTTTTATAAGTACATGATATTTTCCCACGATGTGGAGAGTTCGCCATGCGCTCCTTTGGGAACCGCTGCTGTCGGTAACTTTTATACCATGGATGCAGGAGGGCTGTCAACAAGTTTTAGGGCTCGTTTATCTTCTGGAACGTGATTCGAATCGATTCAGCGTTTGTGTGAGGCAATTAGGCGAAGGCTGCGGGATTTCTGAAGACTTTTGAGCAGGTTTTTGGCCATTCATTTATCGCAGGATCCGGAGAAGATATCGTCGGCTCTTATGGGAATTAAACACTCCTCCCGCTGTTTGCTCCTCAGGAGAAAAATGGCGGATGCGGAGAGCACTGAGCAACAGCCCCTGAGTGCCGCCCCATCCCAGTCGGTCCAGCCATCTCCTCTGCCCAAACCAGTATCATCGGTCCATCATGCCCAGAGGCCTACACACCCGTCCCACGCGCCTCACACCCCTCACTCAGCCAGCTTACCCAGCTGCCCCGGCAGAGGAAAGATGGCCAAGTTCCTCAACCCCGACGAGATGACCTCCAGGGATTACTATTTTGACTCGTACGCCCACTTCGGCATTCATGAGGAAATGCTAAAGGACGAAGTGAGGACGTTGACATACAGGAACTCCATGTACCATAACAAACACATCTTCAAGGACAAGATCGTGCTGGACGTGGGGAGTGGTACTGGCATCCTCTCCATGTTTGCTGCCAAGGCCGGAGCCAAGCACGTGTACGGGATCGAATGCTCAAGCATATCAGAATACTCTGAGAAAATCATCAAGGCCAATCACCTGGACAGTGTTATAACCATCTTTAAAGGGAAAGTGGAAGAGACAGAGCTGCCGGTAGATCAGGTGGACATTATCATCTCAGAGTGGATGGGTTATTGCCTTTTTTATGAGTCCATGCTCAACACGGTCATCTACGCCAGAGATAAATGGCTGAAACCCGGAGGTCTGATGTTCCCAGACAGGGCTGCTCTGTACGTGGTGGCCATTGAAGACAGGCAGTACAAGGACTTCAAGATTCACTGGTGGGAGAACGTTTATGGTTTTGACATGACCTGCATCAGAAACGTAGCTATGAAAGAACCACTGGTGGACATCGTGGACTCAAAGCAAGTGGTATCCAACGCATGCCTGATCAAGGAAGTGGACATCTACACGGTGAAGCCAGAGGAGCTGTCCTTCACCTCCTCCTTCTGTCTGCAGGTCCAGAGGAACGATTACGTCCACGCTCTGGTCACCTACTTCAATATTGAATTCACCAAGTGTCATAAAAAGACTGGCTTCTCCACAGCACCAGACGCCCCGTACACACACTGGAAGCAGACAGTGTTTTATCTGGAGGAATATCTGACTGTGAAAAGAGGAGAGGAGATAGTCGGCACCGTCAGCATGAAGCCAAACGAGAAGAACGCACGTGATCTGGATTTTACCTTCGAGCTGGATTTTAAAGGTCAGCTATGCGAGGCCGCTATCGCTCACGACTACAAGATGCGCTAAGTGTCCAGCAGCGGCGAGAGACGGTTCGTGACGGCACTCAGAGAAGCAGAGGCAGGGGCCGCCCCGGATCACGGCTACAGCCCTGCTGCTGGAAAAAGACGGAAACGGAGAGAAAGACCAGCACACAAGTTGTTATCTCTGGGAGTCTTGCCAACGTTTTTGGAGCGGGGTGGCACTTCTAGCAATAGCGGCCTTGCCTTCGCCGACTCTAGCCTGCACTAGTACGCCATCTCTCCGACCCGACTGTTCTGGGGCCAGCTGACTACACCCCGCTGCAAACAAAAGAATGTCATGCTCTTATGAATGTTAAGTGTTAGTGTACGGTTACTTTGCTTTTGCATTAGGAGCGTGGGATGAGATAATTACTATTGAAGGTTGTGCTTCCACGTCCCAGGCATTAAAATATCTCAGTTTAATATTAGATTGTGATAATTCATTTGCTGGACTTTTCAAACTATTTCTCAATGCAGTAAAGTAAGAGATATCATAGATTTAAATCAGGTTTTAACGAAACCCAggtcattttcagaaaatagtactttttattttgcgcTAAAAATAATTCACTGCTTACTTAAATATCATCGGCCAACGCTAAGAACAATAGgttattttttctgtaaagcattaataatgtttttttgtgtgtggtttttttgttGGCAAATACAACTGATGCTTTAagaaactaatataaataaatacataaatattgagtctattaaaataataagtctattaaaaaaaaatgtgattgtgatttttaatggccaaaaaatttgatttttaatcaCCAAAATATTTTACCAAAAAGATCAATTATGTTTAATTGCCATggaatcatttctttttatttatttttttaactgatcaATTATATATAGACCACAGAAGTATATTTGAATTTCGATTAAagctacattttatatattgatatgaATGGGGGGCATCCGAATTGGAATCAAATTGCATGACAGTTTCAtactgctataaaaaaaaaaaaacttatataaaatatcatttatgttttattttaaaaggtacgTGAATTACACACCAAATGCAATCAAATCATTAGGTTCTGCATCCtattaactatatataatacatagaGAAAAGTCCAccaattataaaatgtaagatCTGGGGCATCGCTAACGGTtctaaaccaataaataaataaataatcgatattaaaaaagacaaaagagtgACTGCAATACAGCgacgtgataaaaaaaaatgttttctagtAACTTTATGAGACTGCAATATTTAGTGTTAGTATTACGTATGATTCTATGCGTGTGAAATTACATTTCCACTTACATGATAGAAAGATGGAAGAAaagatgaaaacagaaaaagagaaacaacacATGATACATATCAAAATATAGACGGCGTGTAGGTTCAGTCTGCGGTGAGATCTTGATAAGCCGGACTCAGATGGCACCTGCTGCTCTTCACCTGTGCTCTTATTCGAGTCTTTGCCAAGGCCATGACTGGGACCGTCCCAGTCCATCTGTGACCCCCAAGTCACAGCTGACTGTACTGTTCAAGTCCTCACCAAAGACATTCGGTTCACATGCAAAGCACATTGTTCGTTATGCGATATATTAATTGTCCATAGTTTGTTTTTACTATAGGTATTTATCTGATTCCTCTGTgaaatattgtgcaatattgGGAAGTGTGAATAACTACAGTATGTTCTCTGTGCAAGGAATGTTTTCCTCATCCATTATGGTATTTTATGGGTGTTTGGTATtggaatttgtttaaaaacttgATTATTCTGCCATGATTTGAGCATCTGTCAACATAACggtaaataaaatagtaattaaaactAGGTAAAATGTTTATAGGTGTACAATAGCATGCCTTTGAAAGCGTTTGTGGctgttaaagaaataaagacatgTTGCTGTTGtgataaaaacatgaaagtgaaacaaaaaagaCTTGTTGGTGATGTAAGCTGGTAAAgcaaataaaagtcatttgttcGTCAA

Function

NR:

description
PREDICTED: protein arginine N-methyltransferase 8-B-like

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K11439 PRMT8; type I protein arginine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264010.1 True 3958 mRNA 0.42 10 22241472 22261969

Neighbor

gene id symbol gene type direction distance location
ttc38 ttc38,LOC107722483,LOC107673144,LOC107738443 coding upstream 215015 22016312 ~ 22026457 (+)
mical3a LOC107673136,LOC108414616,LOC108264267,LOC106573174,LOC106561386 coding upstream 226016 21954303 ~ 22015456 (+)
lepa NA coding upstream 318799 21920107 ~ 21922673 (+)
LOC122323126 LOC107738418,LOC107723941,LOC107672595,LOC107563412,LOC100334116,LOC107673134,LOC107559839 coding upstream 559637 21656321 ~ 21681835 (+)
LOC122363109 cacna2d1,LOC107672590,LOC107738419,LOC107673139 coding upstream 603150 21550145 ~ 21638322 (+)
LOC122363070 mical3a,LOC107559327,LOC107673136,LOC107672585,LOC108414616 coding downstream 112619 22374588 ~ 22399236 (+)
LOC122362770 cotl1,LOC107559813,LOC107722478,LOC107684658,LOC107666224,LOC107738394,LOC107587015 coding downstream 154813 22416782 ~ 22421246 (+)
si:ch211-260p9.3 LOC107587040,LOC107666218 coding downstream 190477 22452446 ~ 22467259 (+)
LOC122362804 cmip,LOC107684659,LOC106560887,LOC106573687 coding downstream 236288 22498257 ~ 22524172 (+)
LOC122362807 srgap1a,srgap1,LOC107670373,LOC108264626 coding downstream 321948 22583917 ~ 22622188 (+)
G128329 tspan9a,LOC107559293,LOC107738414,LOC107587031,LOC107672591,LOC107084745,LOC108414266 non-coding upstream 131014 22109473 ~ 22110458 (+)
G128318 NA non-coding upstream 172519 22033671 ~ 22068953 (+)
LOC122323089 NA non-coding upstream 406451 21694446 ~ 21835021 (+)
G128251 NA non-coding upstream 599843 21638410 ~ 21641629 (+)
G128216 NA non-coding upstream 772919 21466778 ~ 21468553 (+)
LOC122363071 NA non-coding downstream 125630 22387599 ~ 22388615 (+)
G128377 NA non-coding downstream 272497 22534466 ~ 22535424 (+)
G128379 NA non-coding downstream 274806 22536775 ~ 22543533 (+)
LOC122362809 NA non-coding downstream 276413 22538382 ~ 22539895 (+)
G128385 NA non-coding downstream 288476 22550445 ~ 22551614 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 1600413 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 1640953 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 1684845 20551148 ~ 20556627 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other upstream 1692115 20545992 ~ 20549357 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 2147871 20067678 ~ 20093601 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 138975 22400944 ~ 22411957 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other downstream 172837 22434806 ~ 22438679 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 1195131 23457100 ~ 23736848 (+)
G128858 NA other downstream 2187796 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 2321876 24583845 ~ 24588337 (+)

Expression


Co-expression Network