LOC122362691 (LOC107719968,LOC107671151,LOC101886608)


Basic Information

Item Value
gene id LOC122362691
gene name LOC107719968,LOC107671151,LOC101886608
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20970092 ~ 20972842 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264247.1
TTGAGCCTTGAAAACAACCGTGCATGATCTACCAAAACAACAGGCTGGGTTTATCCTGCATCCACCATGGAATGACATGGCCTTGGCTGAGATTGTGagtcaggattttttttaaaaagacagtcTAAATGCAGCATTTTAACTGCATTCATATTGCAGCTGAAAGGGCGTATGAAACCTTTAAGTCGTACAAGTACTAGAGTATTCTACCTAAATGGGAACATGGCTAATCTATGGCAGGTTATAGTCATGACATTAATGTACCTTTGCACATGGCTGAAAAGAAGTTTAAACTGGATTCAGTTCAGAGAGGCAGTTTCTGACACTGTCCAAGAGGAGTCTGATAACCTACAGTCAGAAGTCTGGAGAACAAATCAAGAGTACAGGACCTATCAACAACAGAGCAATGGACCAATGGTAATGGTGCAAACCAGCACGCATACTTTCCAAGTGGATCTGGAGAAACTTGCAGACTGCAGCGAGTATTTTAAGGCTCTTTCCCACTCCTGCATGAGAGAGACATCTGAACAGCTGGTGCACCTTGAACATGTTCCCTCTCCAGTCTTCCACAACCTTCTACAATTCTGCTTCCTACAGCGGTTCTGTGTTCCTGAAGACTTGTTTGTGGAGCACCTACAGGTGAGCACCTACCTGCTTGCTTCGGGATTCACTGATCGTCTACTGATAGCCCTCTCTCAGACCCTAACGGAGTGCACCTGCTTGGGCTATCTACAGCTGGCTGAGGAACTCTGCAGTGAGGAGCTCCAACAGACTGTGCTAACCTACCTGAGCAAGTACCTACTGGAATATCCACACCTGAGCAAGGGCTTGGATCCACACCTTAAAGCAGAGATTCTCAGATTAAGGTCAAAGGGAAGTCTACACTTATGCTGCTTGAGGAAGGAGAACTTAACCTCAAGGAATGATCCGGAAACAGATGTTGCTAGAAAGCTCTTCAGGCTAGAGGAAGATGGAGATTATGTTAAATGGAGTTCTCTGACAGATCTTCCTTTTTATGCAGATAAGTGGTGCTTCACCACAGCGGTTCTCTATAATTACCTCTATCTCATAGGGGGCTATAGACATCGTGTAAAGAAGGGTTATGAGTTCAAGATGGCTTCCTTCCGCTACAACCCTTTTACCAATCAATGGGTATCAACAGCTCCTCTGATTAAGCACAGGCGTCACTTCAGTGCAGCTGTTTGTGAAGGGAGAATCTTTGCTGTGGGTGGCTGGTATCTGGATTCCCTTGTGACTCCTGACTCCAGTACAGGCGTCTACACTGCTGTGGAGAGGTACGATCCCTGGATAGACGCCTGGGAATTTGTTTCGTCTCTTCCTCTGACAGACTTCCAGTTCAGCCTGTCCCTTTCCCATGATTCCCCACTCACAACCAGCCTGGGACACTGCCTCTATGTACTGGGAAACATCCAGAGAACTGGAGAAAAACTTGTGCTGCGTTACGATACTACACAAGATTGCTGGTGTGAACTGCTCCCCACACTAACCCGCTCCAGTGCAGACCTCCCCATCCTGCACTTCCTGGGTGCTGCCAATAGTCAATTGGTTGTAATTGGTGGGAATAACTCTGAAACCATGGTGACATCTTTCTGTGTGGACTCTCAAAAGTGGGGCCCTATCAGAGCAATAGAGAAGACCACTTTAATTGGCCAGGGTACCATTCTGCATAACGAGGTCTACATGTCAGGGATGAAGGACAATGCTGTAGTTAAACTGAACCTGCATTCATTGTCCCTCTGTCCTCTTCCTTCACTTCCTGTCACCACCTGCTACGAGAGCCTTTTCCACCTCTACTTCTGACCTTTTTTTCTAGttatacaataaaatgtgaactgaatatttctcattttgtatAAAAGTACACCACTTTGTGAAAACCTGTTATTGTGGAACAATGTTTCTTTGgcataaataaaagtttagttcactccaaaa
>XM_043264248.1
TTGAGCCTTGAAAACAACCGTGCATGATCTACCAAAACAACAGGCTGGGTTTATCCTGCATCCACCATGGAATGACATGGCCTTGGCTGAGATTGTGagtcaggattttttttaaaaagacagtcTAAATGCAGCATTTTAACTGCATTCATATTGCAGCTGAAAGGGCGTATGAAACCTTTAAGTCGTACAAGTACTAGAGTATTCTACCTAAATGGGAACATGGCTAATCTATGGCAGGTTATAGTCATGACATTAATGTACCTTTGCACATGGCTGAAAAGAAGTTTAAACTGGATTCAGTTCAGAGAGGCAGTTTCTGACACTGTCCAAGAGGAGTCTGATAACCTACAGTCAGAAGTCTGGAGAACAAATCAAGAGTACAGGACCTATCAACAACAGAGCAATGGACCAATGGTAATGGTGCAAACCAGCACGCATACTTTCCAAGTGGATCTGGAGAAACTTGCAGACTGCAGCGAGTATTTTAAGGCTCTTTCCCACTCCTGCATGAGAGAGACATCTGAACAGCTGGTGCACCTTGAACATGTTCCCTCTCCAGTCTTCCACAACCTTCTACAATTCTGCTTCCTACAGCGGTTCTGTGTTCCTGAAGACTTGTTTGTGGAGCACCTACAGCTGGCTGAGGAACTCTGCAGTGAGGAGCTCCAACAGACTGTGCTAACCTACCTGAGCAAGTACCTACTGGAATATCCACACCTGAGCAAGGGCTTGGATCCACACCTTAAAGCAGAGATTCTCAGATTAAGGTCAAAGGGAAGTCTACACTTATGCTGCTTGAGGAAGGAGAACTTAACCTCAAGGAATGATCCGGAAACAGATGTTGCTAGAAAGCTCTTCAGGCTAGAGGAAGATGGAGATTATGTTAAATGGAGTTCTCTGACAGATCTTCCTTTTTATGCAGATAAGTGGTGCTTCACCACAGCGGTTCTCTATAATTACCTCTATCTCATAGGGGGCTATAGACATCGTGTAAAGAAGGGTTATGAGTTCAAGATGGCTTCCTTCCGCTACAACCCTTTTACCAATCAATGGGTATCAACAGCTCCTCTGATTAAGCACAGGCGTCACTTCAGTGCAGCTGTTTGTGAAGGGAGAATCTTTGCTGTGGGTGGCTGGTATCTGGATTCCCTTGTGACTCCTGACTCCAGTACAGGCGTCTACACTGCTGTGGAGAGGTACGATCCCTGGATAGACGCCTGGGAATTTGTTTCGTCTCTTCCTCTGACAGACTTCCAGTTCAGCCTGTCCCTTTCCCATGATTCCCCACTCACAACCAGCCTGGGACACTGCCTCTATGTACTGGGAAACATCCAGAGAACTGGAGAAAAACTTGTGCTGCGTTACGATACTACACAAGATTGCTGGTGTGAACTGCTCCCCACACTAACCCGCTCCAGTGCAGACCTCCCCATCCTGCACTTCCTGGGTGCTGCCAATAGTCAATTGGTTGTAATTGGTGGGAATAACTCTGAAACCATGGTGACATCTTTCTGTGTGGACTCTCAAAAGTGGGGCCCTATCAGAGCAATAGAGAAGACCACTTTAATTGGCCAGGGTACCATTCTGCATAACGAGGTCTACATGTCAGGGATGAAGGACAATGCTGTAGTTAAACTGAACCTGCATTCATTGTCCCTCTGTCCTCTTCCTTCACTTCCTGTCACCACCTGCTACGAGAGCCTTTTCCACCTCTACTTCTGACCTTTTTTTCTAGttatacaataaaatgtgaactgaatatttctcattttgtatAAAAGTACACCACTTTGTGAAAACCTGTTATTGTGGAACAATGTTTCTTTGgcataaataaaagtttagttcactccaaaa

Function

NR:

description
PREDICTED: kelch-like protein 42

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264247.1 True 1956 mRNA 0.45 4 20970092 20972842
XM_043264248.1 False 1860 mRNA 0.45 5 20970092 20972842

Neighbor

gene id symbol gene type direction distance location
chkb chkb,LOC107686538,LOC107710386,LOC107719962,LOC107559534,LOC107671153 coding upstream 391 20963128 ~ 20969701 (+)
arsa arsa,LOC107710387,LOC107599918,LOC107560065 coding upstream 36659 20928515 ~ 20933433 (+)
rabl2 rabl2,rabl2a,LOC107559580,LOC107710389,LOC107686543,LOC107662875,LOC107600941 coding upstream 298255 20666753 ~ 20671837 (+)
odf3b odf3b,LOC107686589,LOC107710372,LOC107559895 coding upstream 312269 20654532 ~ 20657823 (+)
zgc:77752 zgc:77752,LOC107710390,LOC107686544,LOC107559595,LOC107736252 coding upstream 316422 20648300 ~ 20653670 (+)
cpt1b cpt1b,LOC107686536,LOC107599889,LOC107671150,LOC107710383,LOC107559523 coding downstream 673 20973515 ~ 20980699 (+)
impdh1a impdh1a,LOC107559456,LOC107665545,LOC107710381,LOC107599814,LOC107671158,LOC108442450 coding downstream 163964 21136806 ~ 21154598 (+)
si:dkey-5i3.5 LOC107710366,LOC107671161,LOC107559433,LOC107665548,LOC107599782 coding downstream 194673 21167515 ~ 21174321 (+)
tmem243a tmem243a,LOC107560025,LOC107665549,LOC107710379 coding downstream 201749 21174591 ~ 21176792 (+)
elapor2a LOC107729994,LOC107671159,LOC107665539,LOC107559856,LOC565175 coding downstream 204075 21176917 ~ 21193969 (+)
G127935 NA non-coding upstream 32650 20894777 ~ 20937442 (+)
LOC122362840 NA non-coding upstream 82977 20869875 ~ 20887115 (+)
LOC122363025 NA non-coding upstream 322384 20641765 ~ 20647708 (+)
G127873 LOC107686547,LOC107710394,LOC107559637,LOC107600002,LOC107662879,LOC107735654 non-coding upstream 381229 20586051 ~ 20588863 (+)
G127860 NA non-coding upstream 397782 20562083 ~ 20572310 (+)
G128148 NA non-coding downstream 107927 21080769 ~ 21081291 (+)
G128149 NA non-coding downstream 155711 21128553 ~ 21129033 (+)
G128157 LOC107559445,LOC107665544,LOC107710380 non-coding downstream 189044 21161886 ~ 21162751 (+)
G128158 NA non-coding downstream 192430 21165272 ~ 21166073 (+)
G128216 NA non-coding downstream 493936 21466778 ~ 21468553 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 329033 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 369573 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 413465 20551148 ~ 20556627 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other upstream 420735 20545992 ~ 20549357 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 876491 20067678 ~ 20093601 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 1428102 22400944 ~ 22411957 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other downstream 1461964 22434806 ~ 22438679 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 2484258 23457100 ~ 23736848 (+)
G128858 NA other downstream 3476923 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 3611003 24583845 ~ 24588337 (+)

Expression


Co-expression Network