wfdc1 (wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154)


Basic Information

Item Value
gene id wfdc1
gene name wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23915929 ~ 23927588 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264258.1
GTGCTTTTCGTGTCAGTAGACACATTTAACCCTCTCCTCAGAATAACCGATGCATAGACAgctgtctctttttctctttctttttctttgactTCTCTTCCTCAATTTCCCTTTTGTAGGATTCTCTGCAGCTTTTGTTATCTTTATGGCTCTGGAAACTCTCCCTTAGAGGAATTTATGTAACTGCAACAGGACAGAGACACCTTAAGCACATACATGCTGGAGGAAGCCACAACATAAGCACCTTCAACGGGAACAACTTTAAAAGTCTGAGGATTGCTgggagagaagaagaagaacaatcAGGCTGAAAAAGCAGGACCATGCCGGGCTGTCAGATCTGGACTGGGTTTTTGCCGGTTCTGCTGGTCTTTCTGCTGTCTGCATCTGGTTCAGGGAATGCTCGCATGATCAGGAAGAGAGGACTCAACCAGAAGGACTACGAGTACCCCAACCATCCTCAGACGGCTCAGCACCAGAAGAACGACCGCTGTCCTCCTCCGCCGCAGATGCTGCCCGAGCGGGCCTGTGAGGTTCCGGGCTGCCGGTCCGATTCGGAGTGTGAGAGACACAAACGGTGCTGCTACAACGGCTGCATCTACGCCTGCCTGGAGTCAGTGCAACCTCCACCAGTGCTGGACTGGTTGGTGCAGCCCAAGCCGCGGTGGTTAGGAGGCAATGGCTGGCTTTTAGATGGACCAGAAGAAGTTCTGCAGGCTGAGGCCTGTAGTACCACGGAGGATGGAGATGAGCCTTTGCTCTGCCCAACTGGTTATGAGTGCCACATTATCAACCCGGGAAACCCTTCAGCTGGGATCCCAAACCGAGGCCAGTGCATCAAACAGCGTGGAAACTCAGATGGACGTAGCCTGAGACACAAGTCCTTCAAAGATTACAAGGATTATTTAGGAAGTAACTCCAACAATGCAGTGAGCTATGAGAAACATCAGCATAAGCATTTGGGCTGAGACAGGTTCGATTCTGGATGAGTGAAGTAACCAGTAACCACTGACCCTTATACCTGAACCACAACCGTTAAATCAAACAGAACTGCACAAGCCTTTCTCTTCAGCTTAAACCATAGATTGGTTCAAATCTGGTGCTCTTTTTCTTAAGTGCTTACGGTGTGACAAAGATGGCGTGACAAAAATGCAAAGTTAAAATTTCCTACCTCTCATGAAAGCCAAAAACAGACGACAGAAAGTATCAAAAAACTTGTACAATAACATGTCTAATACTTTGGGTAAAATGACAATTATCTATATGTGAGTTAAAGGAAACTATTTGGTGTGTGGTTTTTATGCTGCtgagtcagattttttttccccactttaAACATCAAAAACTAACTACTCTCATTTACCGTGCAGCTTTAACTTTTGGTATAGAAATGCTCCATAATCACTTTAATTTCATACCACACAATTATGTTTCTGCTTTagaatttttgttgttgtcgttgttgtttgttttcaaaaaaatcgTGTTTGGGTGCTTCTCTCAGCTAGTTCATTATAGCcaagaaaatgttaaattccTTCTGTGCTCTGTCACTGCAAgctatttgtttttcatatggTGCTCCAATCAATAactttggttgttgttgttgttgttgttgtttactcATGGTGCAGGTTTATGTTTTACTCCACTGCTCTCTGATAAGCTATAGAAATCTGACGAGTGGGATAAACCACAATACAGCTTTCagtgaaacaaaacatttgaaactggTGCTGCATATACTGCCTTGTAAttccaaataaaac
>XM_043264259.1
ATGTGCTTTTCGTGTCAGTAGACACATTTAACCCTCTCCTCAGAATAACCGATGCATAGACAgctgtctctttttctctttctttttctttgactTCTCTTCCTCAATTTCCCTTTTGTAGGATTCTCTGCAGCTTTTGTTATCTTTATGGCTCTGGAAACTCTCCCTTAGAGGAATTTATGTAACTGCAACAGGACAGAGACACCTTAAGCACATACATGCTGGAGGAAGCCACAACATAAGCACCTTCAACGGGAACAACTTTAAAAGTCTGAGGATTGCTgggagagaagaagaagaacaatcAGGCTGAAAAAGCAGGACCATGCCGGGCTGTCAGATCTGGACTGGGTTTTTGCCGGTTCTGCTGGTCTTTCTGCTGTCTGCATCTGGTTCAGGGAATGCTCGCATGATCAGGAAGAGAGGACTCAACCAGAAGGACTACGAGTACCCCAACCATCCTCAGACGGCTCAGCACCAGAAGAACGACCGCTGTCCTCCTCCGCCGCAGATGCTGCCCGAGCGGGCCTGTGAGGTTCCGGGCTGCCGGTCCGATTCGGAGTGTGAGAGACACAAACGGTGCTGCTACAACGGCTGCATCTACGCCTGCCTGGAGTCAGTGCAACCTCCACCAGTGCTGGACTGGTTGGTGCAGCCCAAGCCGCGGTGGTTAGGAGGCAATGGCTGGCTTTTAGATGGACCAGAAGAAGTTCTGCAGGCTGAGGCCTGTAGTACCACGGAGGATGGAGATGAGCCTTTGCTCTGCCCAACTGGTTATGAGTGCCACATTATCAACCCGGGAAACCCTTCAGCTGGGATCCCAAACCGAGGCCAGTGCATCAAACAGCGTGGAAACTCAGGAAGTAACTCCAACAATGCAGTGAGCTATGAGAAACATCAGCATAAGCATTTGGGCTGAGACAGGTTCGATTCTGGATGAGTGAAGTAACCAGTAACCACTGACCCTTATACCTGAACCACAACCGTTAAATCAAACAGAACTGCACAAGCCTTTCTCTTCAGCTTAAACCATAGATTGGTTCAAATCTGGTGCTCTTTTTCTTAAGTGCTTACGGTGTGACAAAGATGGCGTGACAAAAATGCAAAGTTAAAATTTCCTACCTCTCATGAAAGCCAAAAACAGACGACAGAAAGTATCAAAAAACTTGTACAATAACATGTCTAATACTTTGGGTAAAATGACAATTATCTATATGTGAGTTAAAGGAAACTATTTGGTGTGTGGTTTTTATGCTGCtgagtcagattttttttccccactttaAACATCAAAAACTAACTACTCTCATTTACCGTGCAGCTTTAACTTTTGGTATAGAAATGCTCCATAATCACTTTAATTTCATACCACACAATTATGTTTCTGCTTTagaatttttgttgttgtcgttgttgtttgttttcaaaaaaatcgTGTTTGGGTGCTTCTCTCAGCTAGTTCATTATAGCcaagaaaatgttaaattccTTCTGTGCTCTGTCACTGCAAgctatttgtttttcatatggTGCTCCAATCAATAactttggttgttgttgttgttgttgttgtttactcATGGTGCAGGTTTATGTTTTACTCCACTGCTCTCTGATAAGCTATAGAAATCTGACGAGTGGGATAAACCACAATACAGCTTTCagtgaaacaaaacatttgaaactggTGCTGCATATACTGCCTTGTAAttccaaataaaac

Function

symbol description
wfdc1 Predicted to enable peptidase inhibitor activity. Predicted to be involved in regulation of cell growth. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human WFDC1 (WAP four-disulfide core domain 1).

NR:

description
PREDICTED: WAP four-disulfide core domain protein 1-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0030414 peptidase inhibitor activity molecular_function

KEGG:

id description
K23635 WFDC1; WAP four-disulfide core domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264258.1 True 1772 mRNA 0.44 7 23915931 23927588
XM_043264259.1 False 1723 mRNA 0.44 6 23915929 23927588

Neighbor

gene id symbol gene type direction distance location
si:dkey-246g23.4 si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435 coding upstream 3947 23899926 ~ 23911982 (+)
kcng4a kcng4a,kcng4,LOC107749318,LOC107553964,LOC107738382,LOC107684667,LOC107670163 coding upstream 23764 23859036 ~ 23892165 (+)
si:dkey-246g23.2 si:dkey-246g23.2,LOC107749300,LOC107553994,LOC107684666,LOC107670153,LOC107738383,LOC108415329 coding upstream 62654 23818053 ~ 23853275 (+)
zgc:173742 zgc:173742,LOC107553995,LOC107684664,LOC107749320,LOC108415671,LOC106560872 coding upstream 101189 23789393 ~ 23814740 (+)
plcg2 plcg2,LOC107722471,LOC107738392,LOC107684680 coding upstream 610591 23289516 ~ 23305338 (+)
utp4 utp4,LOC107749295,LOC107553989,LOC107748774,LOC107583899 coding downstream 702 23928290 ~ 23936310 (+)
vps9d1 vps9d1,LOC107749294,LOC107553982,LOC107670156,LOC107748773 coding downstream 9412 23937000 ~ 23952211 (+)
spata2l LOC107670151,LOC107748780 coding downstream 30573 23958161 ~ 23961023 (+)
uri1 uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840 coding downstream 35440 23963028 ~ 23970059 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding downstream 206825 24134413 ~ 24181542 (+)
G128725 NA non-coding upstream 128766 23785024 ~ 23787163 (+)
G128699 NA non-coding upstream 556372 23358451 ~ 23359557 (+)
G128696 NA non-coding upstream 578840 23335791 ~ 23337089 (+)
G128476 NA non-coding upstream 835619 23068310 ~ 23080310 (+)
G128475 NA non-coding upstream 848861 23066812 ~ 23067068 (+)
G128753 NA non-coding downstream 100901 24028489 ~ 24029817 (+)
G128770 NA non-coding downstream 129132 24056720 ~ 24063271 (+)
G128772 NA non-coding downstream 130765 24058353 ~ 24066103 (+)
G128803 NA non-coding downstream 369521 24297109 ~ 24297333 (+)
G128804 NA non-coding downstream 370021 24297609 ~ 24297845 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 179081 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1477250 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 1503972 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3274870 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3315410 20589684 ~ 20600519 (+)
G128858 NA other downstream 522177 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 656257 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 1367155 25294743 ~ 25309740 (+)
mt2 NA other downstream 1418804 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1993679 25921267 ~ 26174156 (+)

Expression


Co-expression Network