si:dkey-103i16.6 (si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161)


Basic Information

Item Value
gene id si:dkey-103i16.6
gene name si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24338891 ~ 24350157 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264268.1
taacaaaaaaaaaaacaataacatgcagCATTTAGAATACCCTTCTTcattttccacagaagaaatatgAAATGGTCTTCAAAGAATCAAGAATCTAGGGTGGGACCAGACACAGAAAACAAGGTGAAAGGTTGGCAATAGACATGGGCTTCAACCCAAAAAGCACTGGCACAGAACAAGGCGGACCAGTTTACTCTGTCAACAAAAAGCAACCTGCAACACCCTGTCAGCATTACAAACAGACAGACTGGACTATTTAAgctcaaataaaattattgcaCATTAGATTCTCCATACcaaagtttaaaaatagtttgaagcAATAATTTGAACGAGATAACAGACTATCACACTAAAATTATAAATCCTTATTTTCATTATCAAACCGTAATATTAAGATTATTGGGTAATTAAgaaatcataattaaatattagcaCACAGCAGATGCAATATGAAACACTGTAATGCAATATCCAATTTAATCATTTACTGTCCTGAAGTCTAAAGTAGCTAAAGGAACATTACCATGGacaataaagataaaatagaGCTGTATTTTGAGCTGTATTTTATTACGTGTTACACGTAAGCAACAACTATACTTGTGGAAACGAGTGAATGAATCAGGGTCTTGGGTCAGCTTTATGAGGTAACGAACCAAAGCATTATTAATATCAAGTCTGTCCTAAAGCGAACTTTAGTAAAGGAAGGTCAGACTCGTATCATTGAATCGATTCTTTCGCATTTAAAAGAACCGGTTCGAAAGCAAGAATAGATTCATCGACTCTTTTAAATCTTAGCAAAAATAGCTAGCgcgtttacattttttcatttattagatTACTAGTATGTGTAAAACTGCAATATCAAGTCACACACATACTTGCAGTGAGTTCATTTGCAACATTTCTCATAACATAATACCTTTGAGTGTGAAACACGATAGTCTACCATTTCGAAAGAAGAAGATTGAGGGAATCGTTTTATCCGAGTTTGTGAACAGTTCTAAACGACTCATTAAAACGATACAAACGAATGATTCATTCGTGAACCGAACATCGTAATAAACCTTAGATGTTTCTAAATATGACGTGGCGCTTATGGGAGAAGTGTTTTCTTTCCCtcgtaataattaataatagtgaTAATCTGGGCATGTATTAACTCCAATTCACACTACACGTACACGTTAGGTGAGAAAGAACAATAACAAGAGCCTATATAGTAACCTTTACGACACGAAGAAAACATGTTAACCCAGCGAAAGGAACTTCGATTTaggaaactaaaaaaaacaggcagatgTTGCTTTGAAGATGATTGCGTGAAAATAAGACGGCAGCCCATCAAACGACATGACGTTAGGTGTGAACATGAGCAAGGCGAAGTCGAGTAGGGACCGAAGAATCGCTCCACTCGGCGTCTCAAGGGTGACTCGCAGTTCTAATAACCCTCAGGAATGTCAGCGCTCTAAACCCACAGATTCAGGCCTGGTTGATGACCTCAGCCTCATGAGCGTGAGTGAACAGCAGGCCTCATTAGCACGGAAAGGGAAGAGTCCATCTCTCAGCACCAAAGCCGTCCTCTCCTCGCCGTCTGGCAGCTCTGTCCCGCGCGGGGCTTTGGAAACTGTCGGCCGGCTGATGAAGCTGGGCCGGGTTCGAAACATTGTGGTGGTTGCTGGAGCAGGTATCAGCACGGCCAGCGGTATACCAGACTTCAGGACACCAGGGACGGGTCTTTATGCTAACCTTGCGAAGTATGACATCCCTTACCCAGAGGCCATCTTTAACATTGACTACTTCTCTGACAACCCTCATCCTTTCTTCTCATTGGCTAAAGAGCTGTACCCTGGACATCACCGTCCAAACTACGTTCACTATTTCGTCCGTATGCTGCATCAGAAGGGCCTGCTGCTCCGCATGTACACTCAGAACATTGATGGGCTCGAAAAACTGTGCGGTATCCCGGATGACAAGCTTGTGGAGGCTCATGGGAGTTTTGCCACTGCTGCCTGCCATCTCTGTTACACACCTTATCCTGCCGAGGAAGCCAAGCAAGCTATAATGAATGGCAGTGTTCCCATCTGTACATTTTGTGCCGGGGCTGTCAAACCCAATGTTGTGTTCTTTGGTGAGGATCTGCCAGAAAAGTACTTTCAACATGCTGAAGATTTCCCAAAAGCTGACCTTCTTATGATCATGGGCACTTCTTTAAAGatcGAGCCTTTCGCCAGCCTGGTCAACACGGTGAAGTCCACAGTTCCTCGTCTGCTGCTGAACCGCTATCCAGTCGGGCCCTTTGAACGTAGGCCCCTGAGAAGGGCTGACTACATGGAGCTGGGAGATCTCTCCGATTCTGTCCAAAAGCTTGCCGAGATCCTGGGATGGCACACTGAGATCCATGACCTCATGAACAGCCATGAAAATGGGCTTTCTTACACCGACCCCAGCAATAGCAGCGGTGAGAACAGTGACTCCTCAGAGACCGACAGCATGCACTAATGTCATTATCAGCCGTGCtttgtatgtttaaaatatcacaGAGTATGACGATGGACACCTGGCAAGGCTTCAAAACCCACAGTGATGTTTATGTATATCGTTACGTCTGAATGTTTTAGGATGTCATTGTTCTTACCAGTAGTAACAGCTGGCTTTACCGTATGCGGGCAGATAATCTGCAGCCATGTTGGATCAGACAGGGAAACTTGACCTTGTCTCTGGCGGGATTAGActcttatttttcagttttaaataattcttcatAATGTCTGCTGCTCATGTTGACTGAAAACCTGCATCTAGCTTTCGTCTAAATTCTAGCACTTATACTCTTTATGGAAAGCCCAGATGAATAAGCATAGAACTGTAATTACATCAAAACTGCACATCTTGATTCAGAGATACAGACCTGTTCAGACTGACTATTTTTAGGTAAAAGTACGTTTTTATCAGACCCTTAAATGTGGCACTTATTTTGTTAAAGACCACTAATTATTTTTGGACAGCGTTCTACTAACTACATTCAAACTGTATTTAAGATTTGGATCTTTATTTGGAAAGGTTGGTAGTGTGCAGAGTTAATATGTAAAATTGGaagtatgtttgtatataaatgtttgcTAGTAAATCGTTTGGTATCCAGCAAGTCACGGTTTGGCCCCATCAAGTGAACGGTGCTAAATTAGTATGGGAGGCGTGACCTCCCAAGTGTGCAGTGCCcccactgtgtgtgttttcacaggcGCTGCAGCCTCTAAGCAGGAGCTCCAACCCCCCCCCAAAACCCTAATAAATGTCTTTGGTCAGCAACAAAGAACCCCAATATCCTGCTgctgtttatgtatgtgtgtgtgtgtgtaaggtttTGCGTATGAGAACAGTTGTGAGTGcaatttttgatttttgcaCAGGGTCAGTGAAGTAGCTGGTTATTATCACACTGCTGTAATCATACCGGTTCATGTCCCTCAGGGATTGTGgcacattttaagaaatatggACAGCCAGAATGCCTACTAAATGTTTCGGGccatctcattttttttttttttcaatcattgTTTCTGAATCATAGAATGGTTTTGTTTAAAACTGGACCCTCTTGGCTCTATATGATTGTTAGTAGTTAAagctttttggttttctttgcaaTTTGTAGTtctgaataataaaatgctgcttttttatcATGTTAATAAAGATTGCTTAtggtatttaataaatgta
>XM_043264269.1
ATGACGTACTTCCTGCATTGTCAAGCGGCTTGTAATGTTTTGCGGGAACGCAGGACTTGCATAGAATCAAACATGACATTCATTTTCGAGTAGATATCACGTTGATGTATTTGTGGTTCCCGGTCTGTTATTCTGTCGCGAGGGATATCGTCGAACCGCCGCTGTTCGTTTTGACTGTCTTCCCTCCTTCCTCAGTCTGGTAAACAAATACAGAGGTGTGAACATGAGCAAGGCGAAGTCGAGTAGGGACCGAAGAATCGCTCCACTCGGCGTCTCAAGGGTGACTCGCAGTTCTAATAACCCTCAGGAATGTCAGCGCTCTAAACCCACAGATTCAGGCCTGGTTGATGACCTCAGCCTCATGAGCGTGAGTGAACAGCAGGCCTCATTAGCACGGAAAGGGAAGAGTCCATCTCTCAGCACCAAAGCCGTCCTCTCCTCGCCGTCTGGCAGCTCTGTCCCGCGCGGGGCTTTGGAAACTGTCGGCCGGCTGATGAAGCTGGGCCGGGTTCGAAACATTGTGGTGGTTGCTGGAGCAGGTATCAGCACGGCCAGCGGTATACCAGACTTCAGGACACCAGGGACGGGTCTTTATGCTAACCTTGCGAAGTATGACATCCCTTACCCAGAGGCCATCTTTAACATTGACTACTTCTCTGACAACCCTCATCCTTTCTTCTCATTGGCTAAAGAGCTGTACCCTGGACATCACCGTCCAAACTACGTTCACTATTTCGTCCGTATGCTGCATCAGAAGGGCCTGCTGCTCCGCATGTACACTCAGAACATTGATGGGCTCGAAAAACTGTGCGGTATCCCGGATGACAAGCTTGTGGAGGCTCATGGGAGTTTTGCCACTGCTGCCTGCCATCTCTGTTACACACCTTATCCTGCCGAGGAAGCCAAGCAAGCTATAATGAATGGCAGTGTTCCCATCTGTACATTTTGTGCCGGGGCTGTCAAACCCAATGTTGTGTTCTTTGGTGAGGATCTGCCAGAAAAGTACTTTCAACATGCTGAAGATTTCCCAAAAGCTGACCTTCTTATGATCATGGGCACTTCTTTAAAGatcGAGCCTTTCGCCAGCCTGGTCAACACGGTGAAGTCCACAGTTCCTCGTCTGCTGCTGAACCGCTATCCAGTCGGGCCCTTTGAACGTAGGCCCCTGAGAAGGGCTGACTACATGGAGCTGGGAGATCTCTCCGATTCTGTCCAAAAGCTTGCCGAGATCCTGGGATGGCACACTGAGATCCATGACCTCATGAACAGCCATGAAAATGGGCTTTCTTACACCGACCCCAGCAATAGCAGCGGTGAGAACAGTGACTCCTCAGAGACCGACAGCATGCACTAATGTCATTATCAGCCGTGCtttgtatgtttaaaatatcacaGAGTATGACGATGGACACCTGGCAAGGCTTCAAAACCCACAGTGATGTTTATGTATATCGTTACGTCTGAATGTTTTAGGATGTCATTGTTCTTACCAGTAGTAACAGCTGGCTTTACCGTATGCGGGCAGATAATCTGCAGCCATGTTGGATCAGACAGGGAAACTTGACCTTGTCTCTGGCGGGATTAGActcttatttttcagttttaaataattcttcatAATGTCTGCTGCTCATGTTGACTGAAAACCTGCATCTAGCTTTCGTCTAAATTCTAGCACTTATACTCTTTATGGAAAGCCCAGATGAATAAGCATAGAACTGTAATTACATCAAAACTGCACATCTTGATTCAGAGATACAGACCTGTTCAGACTGACTATTTTTAGGTAAAAGTACGTTTTTATCAGACCCTTAAATGTGGCACTTATTTTGTTAAAGACCACTAATTATTTTTGGACAGCGTTCTACTAACTACATTCAAACTGTATTTAAGATTTGGATCTTTATTTGGAAAGGTTGGTAGTGTGCAGAGTTAATATGTAAAATTGGaagtatgtttgtatataaatgtttgcTAGTAAATCGTTTGGTATCCAGCAAGTCACGGTTTGGCCCCATCAAGTGAACGGTGCTAAATTAGTATGGGAGGCGTGACCTCCCAAGTGTGCAGTGCCcccactgtgtgtgttttcacaggcGCTGCAGCCTCTAAGCAGGAGCTCCAACCCCCCCCCAAAACCCTAATAAATGTCTTTGGTCAGCAACAAAGAACCCCAATATCCTGCTgctgtttatgtatgtgtgtgtgtgtgtaaggtttTGCGTATGAGAACAGTTGTGAGTGcaatttttgatttttgcaCAGGGTCAGTGAAGTAGCTGGTTATTATCACACTGCTGTAATCATACCGGTTCATGTCCCTCAGGGATTGTGgcacattttaagaaatatggACAGCCAGAATGCCTACTAAATGTTTCGGGccatctcattttttttttttttcaatcattgTTTCTGAATCATAGAATGGTTTTGTTTAAAACTGGACCCTCTTGGCTCTATATGATTGTTAGTAGTTAAagctttttggttttctttgcaaTTTGTAGTtctgaataataaaatgctgcttttttatcATGTTAATAAAGATTGCTTAtggtatttaataaatgta

Function

symbol description
si:dkey-103i16.6 Predicted to enable NAD+ binding activity and NAD-dependent histone deacetylase activity. Predicted to be active in nucleus.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006476 protein deacetylation biological_process
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0070403 NAD+ binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264268.1 True 3732 mRNA 0.41 7 24338891 24350157
XM_043264269.1 False 2581 mRNA 0.45 7 24342924 24350157

Neighbor

gene id symbol gene type direction distance location
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding upstream 23911 24308176 ~ 24314980 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding upstream 47432 24287138 ~ 24291459 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding upstream 52116 24277282 ~ 24286775 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding upstream 157349 24134413 ~ 24181542 (+)
uri1 uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840 coding upstream 368832 23963028 ~ 23970059 (+)
slc17a8 slc17a8,LOC107553956,LOC107672209,LOC107686235,LOC107583818 coding downstream 110759 24460916 ~ 24472951 (+)
nr1h4 nr1h4,LOC107749275,LOC107686236,LOC107672305,LOC107740216 coding downstream 124080 24474237 ~ 24488921 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding downstream 143776 24493933 ~ 24502864 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding downstream 161975 24512132 ~ 24522487 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding downstream 177054 24527211 ~ 24534508 (+)
G128804 NA non-coding upstream 41046 24297609 ~ 24297845 (+)
G128803 NA non-coding upstream 41558 24297109 ~ 24297333 (+)
G128772 NA non-coding upstream 272788 24058353 ~ 24066103 (+)
G128770 NA non-coding upstream 275620 24056720 ~ 24063271 (+)
G128753 NA non-coding upstream 309074 24028489 ~ 24029817 (+)
G128854 NA non-coding downstream 81011 24431168 ~ 24431809 (+)
LOC122363046 NA non-coding downstream 83434 24433591 ~ 24446100 (+)
G128855 NA non-coding downstream 84917 24435074 ~ 24435380 (+)
G128841 NA non-coding downstream 85881 24436038 ~ 24440532 (+)
G128856 NA non-coding downstream 92216 24442373 ~ 24443159 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 602043 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1900212 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 1926934 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3697832 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3738372 20589684 ~ 20600519 (+)
G128858 NA other downstream 99608 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 233688 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 944586 25294743 ~ 25309740 (+)
mt2 NA other downstream 996235 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1571110 25921267 ~ 26174156 (+)

Expression


Co-expression Network