LOC122362767 (LOC107561062)


Basic Information

Item Value
gene id LOC122362767
gene name LOC107561062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19938028 ~ 19940813 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264324.1
ATGTCTCTCACCTCTCTGCTCCTGGCCGAGCTTCTGCTGGTCACCACGGTAACAGCTTCACACTTCTATGGGGGCTCAATGACCTTCAACCCAAGAAGGAATAACGATGGATCTTACAAGgttGAGCTTTACTTCAAGACAACCTACCATTCCTGTTATGGATATGATTACTGGTCGTGCATCTCTGGAGACTGTGGAAATGATGTCAGTTCTGTGATTGGTCAAGTAGATTCGAGTCCAAATGGGGACGATTGGTGTCAGTCTGAGGGAGTGATAACAAAGATAGTTTCCACCAACAGCCCATTCCAGCTCctCAAAAGTGGttgctgctggatctacaacaCTGTCACAAATTCTGGAGACTGGAGTCTTCTCACTTACATTGACCTTGGTGTGAGATCAGACACCTCAGAGCCCAACCGATCACCAATAACAACCACCCTACCATTTGTCAGAGTTCCTCAAAACTGTCCCAGGAGGTACAACCTTTTAGCCTTTGATCCTGGTGGTGACCATGCCACATGCAGATTTGGACTCAGACAAAACCTGGAGTGTGGAATCTGCAACCAACCTGCTGGTTTTACATTGGATGAGCATAACTGCTCTTTGTCATATTCGCACACAATGGTCCGTGGAGTTTATTCTTTTGAGCTGGTGCTAGAGGATTTCCCCATTCACAAGATTGCTTTGTCCTACACCAACCAACCTTCAAAAGAAAAATTTCCTATCAGCTTCATCAGGAATCAACGTTCTATTAATTATTATGGAACTGGTGCTATAAAAGAGTTGGTAAAAACTGAGACAACCACAATGCAACCTGAGACAACCATCACATCACCTAAGACGACCACAACATCCAAGACAACCACAATTCCACTTGAGACAACCAAAACTTTGATTGAGATAACCACCACAACACTTGAGAAAATCACAACATCACCTGAGACAACCACAACACCATCTGAAACAACCACAACAACCGAAACAACCGCAACACCAACTGAGACAACCACCACACCTGAGGCAACCACAACACCATCTGAAACAACCACAACTGAGACAACCACAACAACTGAAATAACCACAACACCAACTGAGACAACCACCACAACAACTGAGACAACCACCACAACCACTGAGACAACCAACACTCCACTTGAAACCACCACATCTCCACCTGAGACCACCACCACACCATCTGAAACAACCACAACAACCGAAACAACTGCAACACCAACTGAGACAACCACCACACCTGAGACAACCACAACACCATCTGAAACAACCACATCTGAGACAACCACAACAACTGAAACAACCACAACACCAACTGAGACAACCACCATACTGGAGACAACCTCAACACCACCTGAGACAACCATAACATCACTTGAGACAACCACCACACCCGAGATAATCACAACATCACCTGAAGCAATCACAACAACACCTGAGACAACCACCACAACAACTGAGACAACCTCCACACCCGAGACAATCACAACATCACCTGAGACAATCACAACACCACCTGAGACAACCACCACCACACCTGAAACAATCACAATATCACCTGAGACAACCACCACCACACCTGAAACAATCACAACACCACCTGAGACAACCACCACCACACCTGAAACAATCACAATATCACCTGAGACAACCACCACCACACCTGAAACAATCACAACACCACCTGAGACAACCACCACAACACATGAGACAACCACAATGATAGCAACAACAACCAAGTCTGAACTTACTACAACCACAATAGCCACTACTACACAAACAACAACCACATTTCCAATAACATCCActgcagcaacaacaacaacaacttttattGAAGTATTGAAGTAGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107561062

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264324.1 True 1867 mRNA 0.45 5 19938028 19940813

Neighbor

gene id symbol gene type direction distance location
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding upstream 2269 19928226 ~ 19935759 (+)
LOC122323160 LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982 coding upstream 29806 19903146 ~ 19908222 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding upstream 36550 19885134 ~ 19901478 (+)
LOC122362762 LOC101886557 coding upstream 312416 19624212 ~ 19625612 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding upstream 334210 19600012 ~ 19603818 (+)
LOC122323149 LOC107561063,LOC107705779,LOC107686622,LOC107561062 coding downstream 4333 19945146 ~ 19954199 (+)
zdhhc7 zdhhc7,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043,LOC107662857,LOC108435925 coding downstream 40648 19981461 ~ 19988814 (+)
cog8 cog8,LOC107686577,LOC107573089,LOC107735343,LOC107600188 coding downstream 53776 19994589 ~ 19999743 (+)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC107662902,LOC105906547 coding downstream 76561 20017374 ~ 20055307 (+)
si:ch1073-390k14.1 LOC107600154,LOC107662899,LOC107736082 coding downstream 160816 20101629 ~ 20118432 (+)
G127637 golim4,LOC107662907 non-coding upstream 13226 19781765 ~ 19924802 (+)
G127632 NA non-coding upstream 311507 19626153 ~ 19626521 (+)
G127630 NA non-coding upstream 314746 19623013 ~ 19623282 (+)
G127617 NA non-coding upstream 361869 19575889 ~ 19576159 (+)
LOC122323166 NA non-coding upstream 369543 19487570 ~ 19568485 (+)
G127663 NA non-coding downstream 44928 19985741 ~ 19991636 (+)
G127766 iqsec3b,LOC107564909,LOC107705799,LOC107735425,LOC107662846,LOC108413205 non-coding downstream 261935 20202748 ~ 20215231 (+)
LOC122363139 NA non-coding downstream 280491 20221304 ~ 20224584 (+)
G127780 NA non-coding downstream 315899 20256712 ~ 20281295 (+)
G127785 NA non-coding downstream 384517 20325330 ~ 20383758 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 649472 19269611 ~ 19288556 (+)
G127500 NA other upstream 1096493 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 1285864 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 1374876 18559963 ~ 18563152 (+)
G127292 NA other upstream 1797775 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 62191 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 126865 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 605179 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 610335 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 648871 20589684 ~ 20600519 (+)

Expression


Co-expression Network