plcg2 (plcg2,LOC107722471,LOC107738392,LOC107684680)


Basic Information

Item Value
gene id plcg2
gene name plcg2,LOC107722471,LOC107738392,LOC107684680
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23289516 ~ 23305338 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264329.1
TGCGACATGGATCAACCTGAAGTCTCCTCACTGAAATAAACGCGTTTCCCGCATTAAGATGTCGCGGTTTTGGTATAATTCACGTTTGCAGCAGGGCGCAAAAGTCTGACAGGGTAGTGCGCGCATCGCTCTCTCATCCCTGGGGATTTTGCATAGATAATTTTGCTtccggattttttttttttaattctcttaaCGTTCTCTTCACTTCCTTGTGTTTAGCGAATAGAGGAACTGACCACATTGTGACTAGACTGAtcatagattttattttatttaataattttttttaaaaaaagtactgcaTTGGGTTGTTTTTCCACGTTTAAATATGAGAATTAGTTTGGTTACAGCAGGTGTTTTTCGACGTGGTCATTGATTTTCTTCTCTAAACTTggTGTGCGACCGAAGGCAGCGATGGCGGGCCGTGTACAGCAGGGAGACCTGACCGAGTACAAGAAGAATCTCATTAAGCGCGACCTCGAGATGGGGATAGTGATGACCGTGTTCAGACAGAGGATGGAGAGGCTTACCGTGCAGGTCATCATGGAGACGCGACAGGTGGCCTGGTCGCGCACCGCCAACAAGACAGAaggagtgtTGGACCTTTTTGAGATCCGGGAAGTACGTGCAGGAAAAAACTCCAAAGACTTTGATCGATTGAAGGACAGCAAGGATAAAACTATAGACCCCAACTCATGCTTCACTATATTCTATGGCTCTCAGTTCGTTCTCAACACTCTCAGTCTGAGCGCTGATTCAGCGGAGGATGCAGAAAAATGGCTGACGGGACTGGAGTTACTCAGACAGGAGACACTGGCGGCTTACACGGACATTATAGAGAGTTGGCTGAGGAAGCAGATGTACTCTGTTgatcaaacaaagaaaaacagCATCACCCTGAAAGAGCTGAAGTGTCTGTTGCCACAAATGAACTTTAAAGTACCAGGTGGACGTTTTTTGAAGGACAGAGTTGCGGTGGTGGGAGCAAAGAAAGAAGTACTGGATTTTGAGCAATTTCACAAATTCTACAATCATTTGATGTTTGAAAACCAAAAGATAatTCTAGAGGAGTTTAAAAAGGAGTCCTGTGCTTTCATTATGGGcAACAACGATCAGCCTATTCAACTCTGCGATTTTCAAAGATTCCTTTTATTTCATCAGAGAGAGTCTTGGGCCAACAATGCAAATCAAGTCCGAGAGCTGATGACCACCTTCATCGACGACACAATGAGGAAGACCAACGATCCAGCCTTTACCGTTGAAGAGTTCCTCAGTTTTCTCTTCAAAGAGAACTCAATCTGGGATGACAAGTTCTCAGAGATTTGCCCACTGGACATGAACAATCCTCTTTCTCACTACTGGATCAACTCTTCTCACAACACATATTTGACTGGAGATCAACTGCGCAGTGAGTCCTCAACAGAAGCTTACGTGCGCTGCCTGAGGCTGGGCTGCGCTGTGTTGATGGACTGCTGGAATGGTCCAGAAGAACCTATTATATACCACGGCTGGACCAGAACCTCCAAGATAAAGTTTAAGGATGTGGTGAAGGCCATCAATGATCATGCTTTTGCAACATCTGATTATCCCGTGGTGCTGTCCATTGAAGAACACTGTGACGTCAAGCAACAAAAATGATGGCTCAGTGTTAAAGATGTTTTCCAAGACAAGATCCTAACCGAGCCGCTGGAACCAGATGCTGAACAACTGCCGTCCCCAACCCAACTGAAAGGCAAGATCATCATCAAGCACAAGAAACTGAACATTGATGAGATCTTTAGCAAAAAGGGCGTACGGAAAGGAGATACAGGAGAGCTCTTCATCTGGGATCAATTGATGAGATGGTACAAGCACTACTGCGTGATCGAGAATAAGACATTGTATTATGCTGAGAAAAACTGTGAAATCCACCTCTCCTCAGTCAACTCAGGCGGTACAGAGCTTCACCAGTTAGAGTCCTGGTTTCACGGGCGGATGTCGGAGGGCAGACAGACAGCCGAGAGGCTGCTGCAGGAACATTGTGCAGATTCGGGTGGAGTTGGACGGACATTTCTGGTGCGAGAGAGCGACACCTTCGTCAACGACTGCACCCTCTCGTTCTGGTAATGTAGGCCTCGCGGCGGCGGAGTTCAACATTGTCGAATCCGTTCCTGTTTAGAAGGAAGCCACACTGTTTATTTCCTCACAGACAACCTGCACTTCTCCAGTGTGTACACGCTTATCCAGTATTACAGAAACCCTCTTCGCTGTCAGGATTTCAACCTGCGCCTTACTGACCTTGTGCCTCGACCAGACCAGCACCTGCAGAAGGGTAAGTGGTTTTACAGTAACTTGAGTCGGGGTGCGGAAGACTATCTCATGAATCCTCGAGATGGAGCCTTCCTCATTAGACAAAGAGAAGATTCAGACTCATATGCCATCACCTTCAGAGGTGAGGGGATGGTGAAACACTGCCGGATACACAAAGATGGATCTATGTACGTGCTGGGCACCTCCAGCGAATTTGAGAGCTTGCTGGAATTGGTGGACTATTTCCGAAAGAAACCGCTGTACCGAAAAGATCAAACTACGCTACCGGTCACACCAGAACTGGTGGAGCGCTTCAGTTcgATAACCATATCTGCCTCACTTTATGATTCTAAACAGTACGTGGAGGCCAACGAGATAGAGCAAGTCTCTGCCCCACTTAGCACCCGTGAGGCCCTTTATGACTACAGAGCCATGCCGGATGAACTCACCTTTCATAAGAGGCGGCTGATCCATAACGTGACAAGGGCGCCAAGCGGATGGTGGAAAGGAGACTACGTTGGAAAACTGCAGCACCATTTCCCTTCAAATTATGTAGAAGAAGTTGCCAATGCATCTAGAGGCAGGTTACCAGAGCGATGTGGAAACCCATTAGGTGACTTATGCAAGGTAGTGGACATCTCGAAGTGTATAGCCGTTACGTTCAGCCAAACACTGCCCAGGACTGTGGTGGTGACCTTGCAGGATAAGAGAATAAAGACATGCGTTTGGTTGTACGGAGACCACGAGCTGTGCGAGTGGTATCGGTGGCACAGGACATTACACAGAGAAAACCAGTCGCCTCTTCAGTCTGAATGGAGCACAGGATATGTACTGCAGCCTGAGCTGATGCGCAGCGATTCATACGACCCTCATCGGAGAGAgaaaagattGATGTTTTTTGTTGATACTCAGGTGATAGGAGCAAGACATCTTCCCAAACCAAATGAAAACATTGCCAGTCCTTTGTGGAAGGAGGTCGAACTGTGTGGCCAAACAGAGGAAAACAAATTCAAGACTACCGTTTGCCATGACAACGGACTGAACCCTATATGGCAAGAGTCTTGGAGGCCGTTTACTTTCAGCATGTGTAGACCAGATCTCACCTTCCTGCGCTTTGTGGTTGAGGAAGACATGTTCTCGAACCCCAACTTCCTGGCCAGGCTACATTCCCCTACTAGTCGCTGCTTTGCAGGGTGCAGATCAGTCCCTCTAAACGGCTTCAGTGAAAACCTAGAGCTAGCGTCCCTTCTGGTGTACGTTGATATGCAGCAGGTGGAGCGCAGAAGGAGGGAACTTTACTCCTCCTCGAGACAGTTGCAAAAGAGAAACAGGCGGGAGTTAAACAGCGAGTTCTGCCTCTCGACCTCACTCCAACCTGCAGCGCAGCGCGGCGCCTGA

Function

symbol description
plcg2 Predicted to enable phosphatidylinositol phospholipase C activity. Predicted to act upstream of or within intracellular signal transduction and phospholipid catabolic process. Human ortholog(s) of this gene implicated in familial cold autoinflammatory syndrome 3. Orthologous to human PLCG2 (phospholipase C gamma 2).

NR:

description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0009395 phospholipid catabolic process biological_process
GO:0004871 obsolete signal transducer activity molecular_function
GO:0004435 phosphatidylinositol phospholipase C activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264329.1 True 3690 mRNA 0.47 51 23289516 23305338

Neighbor

gene id symbol gene type direction distance location
meak7 tldc1,LOC107587014,LOC107722463,LOC107738391,LOC107684679 coding upstream 1453 23283862 ~ 23288063 (+)
cotl1 cotl1,LOC107559813,LOC107722478,LOC107684658,LOC107666224,LOC107738394,LOC107587015 coding upstream 13046 23271267 ~ 23276470 (+)
zgc:56622 zgc:56622,LOC107666229,LOC107738396,LOC107587047,LOC107722465,LOC107559805 coding upstream 23391 23262358 ~ 23266125 (+)
tat tat,LOC107666226,LOC107559814,LOC107587016,LOC107684657 coding upstream 31067 23250875 ~ 23258449 (+)
LOC122362508 LOC107559815,LOC107722485,LOC107684656,LOC107666231,LOC107738399 coding upstream 39380 23244537 ~ 23250136 (+)
zgc:173742 zgc:173742,LOC107553995,LOC107684664,LOC107749320,LOC108415671,LOC106560872 coding downstream 484055 23789393 ~ 23814740 (+)
si:dkey-246g23.2 si:dkey-246g23.2,LOC107749300,LOC107553994,LOC107684666,LOC107670153,LOC107738383,LOC108415329 coding downstream 512715 23818053 ~ 23853275 (+)
kcng4a kcng4a,kcng4,LOC107749318,LOC107553964,LOC107738382,LOC107684667,LOC107670163 coding downstream 553698 23859036 ~ 23892165 (+)
si:dkey-246g23.4 si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435 coding downstream 594588 23899926 ~ 23911982 (+)
wfdc1 wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154 coding downstream 610591 23915929 ~ 23927588 (+)
G128476 NA non-coding upstream 209206 23068310 ~ 23080310 (+)
G128475 NA non-coding upstream 222448 23066812 ~ 23067068 (+)
G128470 NA non-coding upstream 229575 23057387 ~ 23059941 (+)
G128469 NA non-coding upstream 232294 23057020 ~ 23057222 (+)
G128467 hipk2,LOC107722467,LOC107568633,LOC107587022,LOC107684678 non-coding upstream 234987 23053402 ~ 23054529 (+)
G128696 NA non-coding downstream 30453 23335791 ~ 23337089 (+)
G128699 NA non-coding downstream 53113 23358451 ~ 23359557 (+)
G128725 NA non-coding downstream 479686 23785024 ~ 23787163 (+)
G128753 NA non-coding downstream 723151 24028489 ~ 24029817 (+)
G128770 NA non-coding downstream 751382 24056720 ~ 24063271 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 850837 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 877559 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 2648457 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 2688997 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 2732889 20551148 ~ 20556627 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 151762 23457100 ~ 23736848 (+)
G128858 NA other downstream 1144427 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 1278507 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 1989405 25294743 ~ 25309740 (+)
mt2 NA other downstream 2041054 25346392 ~ 25348594 (+)

Expression


Co-expression Network