gnb5b (gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270)


Basic Information

Item Value
gene id gnb5b
gene name gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10196804 ~ 10209150 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264594.1
TGCGCTAACGTCAGCGCATCATAGGCTGTGCTGCTGTATCAGTTCTGGCTCGTAATAAAGAGCATATTAATCGACACATCCGTCATCCGTCTGTGTTTTCTTAAAGATGGCCTGTCAGGGACTAGCGAAGGGGGAAACCATCAACACGCTGAAAGCGGAGTCTGAGTCTTTGAAAGCCAAGCTAGAAGAGGAAAGAGCTAAACTACACGACGTCGAGCTGCATCAAGTGGCAGAGAAGATAGAGGCTCTGGGACAATTTGTCATGAAGACAAGGAGAACCCTAAAAGGACATGGAAATAAAGTGCTGTGCATGGACTGGTGCCGCGACAAAAGAAGAATCGTCAGCTCCTCTCAGGATGGAAAAGTCATCGTGTGGGACGCATATACAACCAATAAGGAGCATGCGGTCACTATGCCCTGCACCTGGGTCATGGCTTGTGCTTATGCCCCTTCTGGCTGCGCTGTGGCTTGTGGTGGTTTGGATAATAAATGCTCCGTCTATCCACTTTCTTTGGATAAAAATGAGAACCTGGCAGCTAAGAAGAAATCTGTGGCCATGCACACCAACTATCTGTCTTCCTGCAGCTTCACCAACTCTGACAtgcagatTCTGACATCAAGCGGTGATGGGACATGTGCCTTATGGGATGTTGAGAGTGGGCAGCTGCTGCAGAGTTTCCATGGTCACTCAGCTGATGTTCTTTCATTAAACCTCGCGCCCTCTGAAACAGGAAACACCTTTGTATCAGGGggctGCGATAAGAAGGCCAATGTGTGGGACATGCGCTCGGGACAGAATGTTCAGTCCTTTGAAACGCATGAGTCTGACATCAACAGTGTGAAGTATTACCCTAGCGGAGATGCGTTTGCAACTGGATCTGATGATGCTACGTGTCGTCTGTACGATCTGCGAGCTGACCGTGAGGTTGCCATCTACTCTAAAGAAAGCATCATATTTGGAGCCTCTAGTGTGGACTTTTCCCTCAGTGgcCGATTGCTCTTTGCAGGATATAATGACTACACCATTAACGTATGGGATGTCCTGAAAGGTACCAGAGTGGCAATTCTCTTTGGCCACGAAAATCGGGTCAGCACCGTCAGAGTGTCCCCTGATGGGACAGCGTTCTGCTCAGGATCATGGGACAACACTTTGCGGATCTGGGCTTGAAGAGTTATTCTGCACCGGTGTGAGAAGATCTGTACTTTTGCTTGTCAAAATCACAGCACACAGTGGGGCTGATCTATAGAAAtacagattttcttttgttattttatcacAATTAAATGTCTCTTTTCCATGGCTTCtcaccaaaaaatatataatagtaataatatataaaatacactatTTGAAAAGGATTGCCGTTCAATAATtagtttgtaaaatatttttttaaattaaaaacagaatgttttaatataattatctaTACTTTTGTAGGTATATTTTATGGTAATGATTTAAAGAGAATTGATTTCAGTAGGCCTACTTGTACATTTGGTCTAGATCAGATCTGTATCTAGAAATCTAAAAATTACTGTCATGAATGAGTTTTGCTTGCactagaattaaaaaatatatatagataagtGTTTAAAGTGCGTGCGTTTTCATATCAAGTGTAAtataatcaacatttattaatcagTGTTTGTCCACATCAGTATTAGCAGTGTCCTGAAAATATACGCTATATGTTATGTTTACTATTGCTTGGTGTTTATAAGTGTGAAATATTGCCACTGTATTCAGGaggattaaaaatattttcctgtt

Function

symbol description
gnb5b Predicted to enable signaling receptor complex adaptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and dopamine receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be part of heterotrimeric G-protein complex. Predicted to be active in cytoplasm. Is expressed in cardiovascular system; cranial ganglion; neurons; and visual system. Orthologous to human GNB5 (G protein subunit beta 5).
gnb5 Enables G-protein gamma-subunit binding activity and chaperone binding activity. Contributes to GTPase activator activity. Involved in dopamine receptor signaling pathway; negative regulation of voltage-gated calcium channel activity; and positive regulation of GTPase activity. Located in cytosol.

NR:

description
PREDICTED: guanine nucleotide-binding protein subunit beta-5-like

GO: NA

KEGG:

id description
K04539 GNB5; guanine nucleotide-binding protein subunit beta-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264594.1 True 1777 mRNA 0.42 11 10196804 10209150

Neighbor

gene id symbol gene type direction distance location
LOC122362596 NA coding upstream 3644 10190770 ~ 10193160 (+)
LOC122362557 NA coding upstream 35878 10148075 ~ 10160926 (+)
LOC122363015 myo5a,myo5aa,LOC107746947,LOC107712751 coding upstream 395233 9751257 ~ 9801571 (+)
arpp19a arpp19a,LOC107704273,LOC107676482,LOC107712699,LOC107550627,LOC107588548,LOC108413875 coding upstream 447021 9744904 ~ 9749783 (+)
fam214a fam214a,LOC107676484,LOC107704272,LOC107550636,LOC107588549 coding upstream 457398 9709204 ~ 9739406 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding downstream 203 10209353 ~ 10214486 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding downstream 88347 10297497 ~ 10320648 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding downstream 119792 10328942 ~ 10335753 (+)
acadl acadl coding downstream 143425 10352575 ~ 10361312 (+)
LOC122363031 LOC107692742,LOC107738533 coding downstream 535237 10744387 ~ 10761544 (+)
LOC122323099 NA non-coding upstream 61716 10133971 ~ 10135088 (+)
G125254 NA non-coding upstream 134024 10057741 ~ 10062780 (+)
G125253 NA non-coding upstream 141747 10054812 ~ 10055057 (+)
G125240 NA non-coding upstream 158876 9802919 ~ 10037928 (+)
G125243 NA non-coding upstream 408701 9786260 ~ 9788103 (+)
G125341 mapk6,LOC107550634,LOC107704268,LOC107747613,LOC107588533,LOC107700590 non-coding downstream 38990 10248140 ~ 10249308 (+)
G125344 NA non-coding downstream 75488 10284638 ~ 10288340 (+)
G125347 NA non-coding downstream 77577 10286727 ~ 10341585 (+)
G125352 NA non-coding downstream 132617 10341767 ~ 10343454 (+)
G125353 LOC107700587,LOC107746952,LOC107588544,LOC107588531,LOC107747623,LOC107704264 non-coding downstream 135619 10344769 ~ 10348696 (+)
G125192 NA other upstream 831316 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 1649081 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 1659856 8176353 ~ 8536948 (+)
si:ch73-103b9.2 LOC107675000,LOC107667976,LOC107719884,LOC107711755,LOC107567296,LOC101883751 other upstream 1664732 8168865 ~ 8532072 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other downstream 206863 10416013 ~ 10425840 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other downstream 423327 10632477 ~ 10718085 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other downstream 615824 10824974 ~ 10837276 (+)
G125496 snrpd2,LOC106612977 other downstream 758935 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 1016963 11226113 ~ 11233814 (+)

Expression


Co-expression Network