arfgap2 (arfgap2)


Basic Information

Item Value
gene id arfgap2
gene name arfgap2
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 12990848 ~ 13000860 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264725.1
CTGTATTTTTCCACCGACGTCACTTCCGGCCGGTCTTTTAATCTTCTCTGGTTTCTGTTTTCGCTCTGCTCAGTTGGCAAGATGGCGTCGGAACCGAACAAGACAGAAATTCTCACCATTTTTAAACGTTTGCGCTCCATACCCACAAACAAGGCCTGCTTTGACTGCGCTGCTAAAAACCCGAGTTGGGCCAGTATTCCCTATGGAGTGTTTCTTTGCATCGACTGTTCTGGGATACATCGCTCGTTGGGAGTGCACTTGAGCTTTATCAGGTCCACAGAGCTGGATTCCAACTGGAGCTGGTTTCAGCTGAGATGCATGCAGGTTGGAGGAAATGCCAACGCGATGGGGTTTTTCCGCCAACACGGCTGTACCACCAATGACACCAATGCGAAGTATAACAGTCGTGCGGCTCAGATGTACAGAGAGAAGATTCGTCAGCTTGCCAACGCCGCGCTTTCCAAGTACGGCACTGATCTGTGGATTGACAACTCAGGCTGCACTCAGCAATCACCTGTAGAGAAAAGAGAGACCGACTTCTTTGACGAGCACACACAGCCGGCCAACAGCTGGAACATGGCGTCCCCATCCCTAACAGATGAGAATGGAGCCGTGACCCCTCAACTGGAGCAGAGCAATCCTAAGAGTTCAGAGAGCGGTACTCAGTCCGAAGACGGTCCAAGCATCGAAGGACTGAGCACAAGTCCTAAAGCCACAATagACGACTCAATGAGATTGACGGCTGAAGAGTCTCCTAAAGAAGTGAAACCCTCCATTATCGGAAAGAAGAAGCCAGCCGCTGCGAAGAAAGGGCTTGGTGCTAAAAAGGGTCTAGGTGCCCAGAAGGTGAGCAGCAAGAGCTTCACTGAGGTGGAAAAACAAGCCCAGGTGGcagagaaaatgagagaggAACAGGCCGCCGAGGCCAAGAAACAAGCCGAAGAGTCCATAGTGGCCTCGATGCGACTGGCCTACAAAGAGCTGGAGATTGACAGGAAGATGGAGGAGAAGAAACTGAAGAACCTTGAGGGCAAGAAGAAGGAACAGGCAGAGAGGCTGGGCATGGGGTTTGGCAACAGGAGTGCCGTGTCTCATTCCGTGATGGCTGAGATGCAGGTGATCGAGCAGGAGACCCCGGTCGGAGTCAAATCCTCTTCTCGCTCTAAACTGGACATGTTTGATGAGCCTGGCTTCGCCTCCGGACCACCTAAGTACAAGGACAACCCTTTCACTTCAGGAGACAGCTTTGGCTCGCGGTGGGACAATGATGGAGCATCATCGTTCTCTTCCTGGGCTCTGGAGAAGGAGGAGCCTAAAGAGAGTGAGGTCACCATCTCAAGCATCCAGCCAATCGGAGAAAGGTTGCCCAGCCGACGGAAGCCTGAGGTCTCTGTGCCAGTCACAGAGTCCAGCGAAGCACGACAGAAGTTTGCCAACGCTAAAGCAATCTCATCAGACATGTTCTTCGGCCGTGAGAGCAACCCAGAGtATGAAGCGAAGACTCGTCTAGAAGGCATGTCTGGAAGCACCTCCATCAGCTCTGCTGACCTGTTTGGGGACGGCAGCGTCCGTTCCTCTGGCTCATCAGGATTCGACAGCGTGCTTCCCTCCGGTCCCGACATCGCTCAGTTCAAGCAAGGTGTGAAGACGGTTGCCGGGAAGATGGCAGTGCTGGCCAACGGAGTTATGAACACCATTCAGGATCGCTATGGATCTTACTGAAAGGACTGCATTTGAACGAAACGGAAGTTGCATTACAGGACGCACCTCACTGCTGATTGGCTCTGGTCTGTCTTTCCTACATGAACACGCAtccgagagagagaaaggccaAGGAGCTCCCAATCTCTCCCCAGACCACTGTAGACACTCTTGCTGAcagtattttaatttctttttgagGACTCTcgttttattttcagataaCCGCAGAAGCACTGGGAAGAGTGTAAAGTTTGTTTTGAGAATCGCAGTGCTTTCTGTTCAAACTAACAGTCCTGTTTTCTACGCCGTGTACTGGTCTTTGATTTCAAATAGATATGGATTTGAAAAGTATTCTGTCTGGAATTAAATGTATAACTAAACCTAGAGCTCTAATTTGTTCTTACGgctttctttttgtattttatcgGCATCCGAAGACCTCGGTTCATTCGGTGAACAAGGAAAGGGAAACCCATatgttgtatttatacatttggaATATTTTGAGCCCGTTTCCTAAATGCAGTCCATCACGATTATGTTATGAcaaagtgagtaaatgacggTAATATTGTGCAATACGTCTTGGCATGTCGAGGACGAGTTCTTGAGGCTTTTTGTGGATGCGGATGCGCGAGTGATTCCCAGATCCCAGTTTGTTTTGCATGCCAGCATAAGCCGAAGACACTGGTGCTGTATCCGATTTCCAGCATTCGCTCTTACTTACGAAGAAAGTGTTCGAGAAATCAAGCGGGCTGAGGAGGTTTACAGCGACGTGATTTAATCAGCGGAAATTTAATAAGACGCCCTCAGTTTAGAAGATAAAATGACAGCTGACAAACTAgatactttatttaaagttcaCCCACTGTCGTCCGTTTTCTGGTAATCTGCATGTGCGATACTGTTTCCTAGTACATGCGTTACAgcctttctttccttttttcttttgggGTTTATGCCAGACCGGGGAGCTGGCGAATGGTATTTGTCTGCCTGTCCGTTTGTATCCCAATgctaaatttgaaaataaagaacaacAATCCAACTACAGTCTGgaataaaaagctatttattgTAGCCTGTTGAGAAGAATCTATTGAGATTTGTGTGAATAAAGATTGAATTCCCTGCAA
>XM_043264726.1
CTGTATTTTTCCACCGACGTCACTTCCGGCCGGTCTTTTAATCTTCTCTGGTTTCTGTTTTCGCTCTGCTCAGTTGGCAAGATGGCGTCGGAACCGAACAAGACAGAAATTCTCACCATTTTTAAACGTTTGCGCTCCATACCCACAAACAAGGCCTGCTTTGACTGCGCTGCTAAAAACCCGAGTTGGGCCAGTATTCCCTATGGAGTGTTTCTTTGCATCGACTGTTCTGGGATACATCGCTCGTTGGGAGTGCACTTGAGCTTTATCAGGTCCACAGAGCTGGATTCCAACTGGAGCTGGTTTCAGCTGAGATGCATGCAGGTTGGAGGAAATGCCAACGCGATGGGGTTTTTCCGCCAACACGGCTGTACCACCAATGACACCAATGCGAAGTATAACAGTCGTGCGGCTCAGATGTACAGAGAGAAGATTCGTCAGCTTGCCAACGCCGCGCTTTCCAAGTACGGCACTGATCTGTGGATTGACAACTCAGGCTGCACTCAGCAATCACCTGTAGAGAAAAGAGAGACCGACTTCTTTGACGAGCACACACAGCCGGCCAACAGCTGGAACATGGCGTCCCCATCCCTAACAGATGAGAATGGAGCCGTGACCCCTCAACTGGAGCAGAGCAATCCTAAGAGTTCAGAGAGCGGTACTCAGTCCGAAGACGGTCCAAGCATCGAAGGACTGAGCACAAGTCCTAAAGCCACAATagAAGTGAAACCCTCCATTATCGGAAAGAAGAAGCCAGCCGCTGCGAAGAAAGGGCTTGGTGCTAAAAAGGGTCTAGGTGCCCAGAAGGTGAGCAGCAAGAGCTTCACTGAGGTGGAAAAACAAGCCCAGGTGGcagagaaaatgagagaggAACAGGCCGCCGAGGCCAAGAAACAAGCCGAAGAGTCCATAGTGGCCTCGATGCGACTGGCCTACAAAGAGCTGGAGATTGACAGGAAGATGGAGGAGAAGAAACTGAAGAACCTTGAGGGCAAGAAGAAGGAACAGGCAGAGAGGCTGGGCATGGGGTTTGGCAACAGGAGTGCCGTGTCTCATTCCGTGATGGCTGAGATGCAGGTGATCGAGCAGGAGACCCCGGTCGGAGTCAAATCCTCTTCTCGCTCTAAACTGGACATGTTTGATGAGCCTGGCTTCGCCTCCGGACCACCTAAGTACAAGGACAACCCTTTCACTTCAGGAGACAGCTTTGGCTCGCGGTGGGACAATGATGGAGCATCATCGTTCTCTTCCTGGGCTCTGGAGAAGGAGGAGCCTAAAGAGAGTGAGGTCACCATCTCAAGCATCCAGCCAATCGGAGAAAGGTTGCCCAGCCGACGGAAGCCTGAGGTCTCTGTGCCAGTCACAGAGTCCAGCGAAGCACGACAGAAGTTTGCCAACGCTAAAGCAATCTCATCAGACATGTTCTTCGGCCGTGAGAGCAACCCAGAGtATGAAGCGAAGACTCGTCTAGAAGGCATGTCTGGAAGCACCTCCATCAGCTCTGCTGACCTGTTTGGGGACGGCAGCGTCCGTTCCTCTGGCTCATCAGGATTCGACAGCGTGCTTCCCTCCGGTCCCGACATCGCTCAGTTCAAGCAAGGTGTGAAGACGGTTGCCGGGAAGATGGCAGTGCTGGCCAACGGAGTTATGAACACCATTCAGGATCGCTATGGATCTTACTGAAAGGACTGCATTTGAACGAAACGGAAGTTGCATTACAGGACGCACCTCACTGCTGATTGGCTCTGGTCTGTCTTTCCTACATGAACACGCAtccgagagagagaaaggccaAGGAGCTCCCAATCTCTCCCCAGACCACTGTAGACACTCTTGCTGAcagtattttaatttctttttgagGACTCTcgttttattttcagataaCCGCAGAAGCACTGGGAAGAGTGTAAAGTTTGTTTTGAGAATCGCAGTGCTTTCTGTTCAAACTAACAGTCCTGTTTTCTACGCCGTGTACTGGTCTTTGATTTCAAATAGATATGGATTTGAAAAGTATTCTGTCTGGAATTAAATGTATAACTAAACCTAGAGCTCTAATTTGTTCTTACGgctttctttttgtattttatcgGCATCCGAAGACCTCGGTTCATTCGGTGAACAAGGAAAGGGAAACCCATatgttgtatttatacatttggaATATTTTGAGCCCGTTTCCTAAATGCAGTCCATCACGATTATGTTATGAcaaagtgagtaaatgacggTAATATTGTGCAATACGTCTTGGCATGTCGAGGACGAGTTCTTGAGGCTTTTTGTGGATGCGGATGCGCGAGTGATTCCCAGATCCCAGTTTGTTTTGCATGCCAGCATAAGCCGAAGACACTGGTGCTGTATCCGATTTCCAGCATTCGCTCTTACTTACGAAGAAAGTGTTCGAGAAATCAAGCGGGCTGAGGAGGTTTACAGCGACGTGATTTAATCAGCGGAAATTTAATAAGACGCCCTCAGTTTAGAAGATAAAATGACAGCTGACAAACTAgatactttatttaaagttcaCCCACTGTCGTCCGTTTTCTGGTAATCTGCATGTGCGATACTGTTTCCTAGTACATGCGTTACAgcctttctttccttttttcttttgggGTTTATGCCAGACCGGGGAGCTGGCGAATGGTATTTGTCTGCCTGTCCGTTTGTATCCCAATgctaaatttgaaaataaagaacaacAATCCAACTACAGTCTGgaataaaaagctatttattgTAGCCTGTTGAGAAGAATCTATTGAGATTTGTGTGAATAAAGATTGAATTCCCTGCAA

Function

symbol description
arfgap2 Predicted to enable GTPase activator activity. Predicted to be involved in COPI coating of Golgi vesicle. Orthologous to human ARFGAP2 (ADP ribosylation factor GTPase activating protein 2).

NR:

description
PREDICTED: ADP-ribosylation factor GTPase-activating protein 2 isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264725.1 True 2840 mRNA 0.48 17 12990848 13000860
XM_043264726.1 False 2801 mRNA 0.48 16 12990848 13000860

Neighbor

gene id symbol gene type direction distance location
fam118b fam118b,LOC107669270,LOC107565084 coding upstream 12214 12968956 ~ 12978634 (+)
ilvbl ilvbl,LOC107758073,LOC107669134,LOC107753009,LOC107670636 coding upstream 24354 12956613 ~ 12966494 (+)
b3gnt2l LOC107758074,LOC107669052,LOC107554988,LOC107670608,LOC107753015,LOC107565088 coding upstream 59680 12926685 ~ 12931168 (+)
ehd2b ehd2,ehd2b,LOC107565090,LOC107668886,LOC107670629,LOC107554987 coding upstream 76535 12905342 ~ 12914313 (+)
bicra gltscr1,LOC107758076,LOC107565091,LOC107554986,LOC107670631,LOC107668814,LOC107714538 coding upstream 86265 12891984 ~ 12904583 (+)
large2 gyltl1b,LOC107670633,LOC107670096,LOC107554994,LOC107602128,LOC107758043 coding downstream 51108 13051968 ~ 13165194 (+)
cngb1a cngb1a,LOC107717637 coding downstream 272337 13273197 ~ 13299638 (+)
kifc3 kifc3,LOC107670565,LOC107670616 coding downstream 301676 13302536 ~ 13337442 (+)
eif3m eif3m,LOC107602127,LOC107671036 coding downstream 361687 13362547 ~ 13366713 (+)
prrg4 prrg4,LOC107670609,LOC107671204,LOC107758038,LOC107717603 coding downstream 370842 13371702 ~ 13376207 (+)
G125784 NA non-coding upstream 349412 12641192 ~ 12641436 (+)
G125783 NA non-coding upstream 354465 12636156 ~ 12636383 (+)
G125760 NA non-coding upstream 400904 12579725 ~ 12589944 (+)
G125753 NA non-coding upstream 578603 12411865 ~ 12412245 (+)
G125750 NA non-coding upstream 596116 12393511 ~ 12394732 (+)
G125855 si:ch211-71n6.4,LOC107758068,LOC107753016,LOC107670624,LOC107578946,LOC105902995 non-coding downstream 9014 13009874 ~ 13012900 (+)
G125877 NA non-coding downstream 336894 13337754 ~ 13339066 (+)
G125879 NA non-coding downstream 345818 13346678 ~ 13346937 (+)
G125881 wt1b,LOC107717629,LOC107670615,LOC107758040,LOC107602104,LOC107575657,LOC107673204 non-coding downstream 349631 13350491 ~ 13351730 (+)
G125886 NA non-coding downstream 366556 13367416 ~ 13369511 (+)
glb1l2 glb1l2,si:dkey-224e22.2,LOC107554970 other upstream 34903 12946841 ~ 12955945 (+)
napab napab,LOC107668964,LOC107758075,LOC107670630,LOC107714540,LOC107565089,LOC108413256 other upstream 65380 12917226 ~ 12925468 (+)
G125836 NA other upstream 106236 12880588 ~ 12884612 (+)
G125830 NA other upstream 168067 12809450 ~ 12822781 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other upstream 1645051 11330221 ~ 11345797 (+)
LOC122362547 LOC107672480,LOC107758042,LOC107554971 other downstream 215624 13216484 ~ 13222148 (+)
rpl35a rpl35a,LOC107673417,LOC107670602 other downstream 426184 13427044 ~ 13430765 (+)
daw1 daw1,LOC107727686,LOC107576612,LOC107717604 other downstream 669429 13670289 ~ 13706114 (+)
G126132 foxa3,LOC107717614,LOC107692498,LOC107602118,LOC107727696,LOC107575381,LOC107670595 other downstream 678185 13679045 ~ 13682571 (+)
lbhl lbhl other downstream 861011 13861871 ~ 13869332 (+)

Expression


Co-expression Network