elapor2a (LOC107729994,LOC107671159,LOC107665539,LOC107559856,LOC565175)


Basic Information

Item Value
gene id elapor2a
gene name LOC107729994,LOC107671159,LOC107665539,LOC107559856,LOC565175
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 21176917 ~ 21193969 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264856.1
TAACTCCTTTGTGACGTAATTTCTAAGACTTCAAACCGGCTCCGTCGGATGACGTTCTGCGTTGACGTCGCTCGCCGATATGACGGGACGGTCCCGTTATTCCTCTCCGCGAGCGATGGAGCGCACGAGGAAGACCGCGGTCCTCCACCGAAGCCGTTTAGCGCCGGAACACGCGGCGtggatgtgttttgttttcatcctGAACGCGTCCGCGGCGTGCGCCGTTCACCTGCGCCCGTGTAAAGAGGCGGACTACTACTTTCAGTACACGGAGTGTGACAGCACCGGGTCCAGATGGAGGGTGGCCATTCCTCTGAATCCAGGAGAGTGTACTGAACTACCAGAACCTGTGCAGGGCGCCGACTGCACATTCTCGTGCAAAGCGGGGGAGTTTCTGGAGATGTCTGCTCAGGAGTGCACTCAGTGTGCGGCTGGCACTTACTCGCTGGGCAGCGGCCTGCGTTTGGATGAGTGGGACGACATCCCTCCTGGATTCAGCAGCCTGGCGACCAGCCCTGATAACACACGCAGCGGACAGAATGTGTCCACCTGCAGCAGcgcAAAGTGGGTCGCTCAGGGCACGTATCTGGAGTCTAGCAGAGATGAGTGTACTGTGTCTCTGATCTACACTGTACACTTGAAGAAGCCGGGGTCAGCGTCCTTTGAGTACCAGTATGTGGATAACAGCATCTTCTTTGAGTTCTTTattcAGAACGACCAGTGTCAAGAGATGGACCaggattcaaataaaaaatggatCAAATTAACGACTCACGGAGAGTGGGGAACACACAGTGTGAATCTGAATTCTGGCACTAATATTCTGTATTGGAGAACCACTAGAGTCACACTCGGCTCTAAAGCAGTCAAGCCTGTGCTCCTGAAGAACATACGAATTGAAGGTGTGGCGTATACATCGGAGTGTTTTCCATGTAAGCCTGGGACGTTCAGTCGCACCCCAGGCTCGTCCTCCTGTGAGCCCTGTCCACGGGACACGTACTCCGGCCGAGGGGCCAGCTCCTGCACACCTtgtaacacaaaaacacactacGCCTCAGAAGGCTCTGCCATGTGCAAAAGTAGACCTCCATGCTCAGAAAAAGACTACATCCAGACGTACACCACCTGTGATAAAGATGGaaagACTCAGGTCATATATAAGTGGGTAGAACCTCAGATTTGTTTGGCATCTGCTGCTGGCGCAGTAACACTGCCCCCTTCCGGTCAGCGCCAGCCTTGTCCGCCCTGTAATCCTGGTTTCTATAACAACGACACTGCCACCTGTTCTCCCTGTCCACCCGGGACGTACTCCGATGGGGTCAAAGCATGCCGGCCCTGTCCAGCTGGCACAGAGCCTGTCCTCGGCTATGAGTACAAGTGGTGGAACATGCTGCCTGCCAACGTGAAGACATCCTGCTTCAACGTGGCCAACAACAATTGTGATGGATTGAATGGTTGGGCGGTGGCGGGTGATCACGTACAATCAGGAGCAGGTCGATCAGATAACGATTATCTCATATTAACTCTCACTGTGCCTGGATTCAAGTTGCCTGTGTCAGTTCGAGGAGCATCCGGCGGTGAGTACGGCCGGATCACTTTTGAGTTTGAAACCAGCTGCTCGGCTGACTGTGAGTTCTACTTCATGACGGATGTAAACAAAAGGAGCACAAATGTCATTGAATCGTGGGAGGGGAGTAAAAGCAAACAGAGTTACACACACATCATGGCTGAAGACTCTCCTGTTGCGTTCACCTGGGCTTTTCAACGCACCAGTCAGGCTAGTGACGTGCGTCGGTATGTAAACGACCTGGTGAAGATTTACTCTGTGACTGTCACTAATGCCATGGACGGGGTGGCATCAGCGTGTCGGCCGTGTGCCCTGCAGTCTCAGCAGGCCGGCTCCTCCTGTGTGCCCTGTCCGGCTGGACACTACATTGATAAAGACACCAACCGGTGCCAGGAGTGCCCTCCTAACACCATCCTGTCAGGGCATCGCATCTACGGCAAAGAAGCGTGCCAGCCGTGTGGGCCAGGCAGCAAAAGCAACAAGGAGCACAGCGTGTGTTTTAGTGACTGTTTGTTCACATACACTGACCAGAATCGGACACTTCGGTATGACTTCAGTGCTCTGAACTCCGCTGGCTCTATCATGAACGGGCCCAGCTTCACTGCAAAAGGCACAAAGTATTACCACCTCTTCAATATCAGCCTGTGTGGAGCTGAGGGTCACAAGGCTGCGGTCTGCAGAGATAATGTCACAAACCTGCCCAATGAGGACGCTGAAGGCGGTCAGCTGGGCAGTTCAGTGGAGGCTTTTCTCTGTCAATCAACAATTATTCCATCTGATGGGCGGGGCTTAAGAACAGCTCTTTCCTCTCAGTCTATTAGCCTGGCTGACACTTTTCAGGGAGCCACAGTAGAGAAAACTCAACTTAACGGAATAACCACCAGACCAGAACTATTTCCATCTGCATCCGAGAGAATCCCAGATGTCCACTTCTTCTATCGATCTTCGCAGGTCACAACCTCGTGTCCGAGAGGCAGGAATGCAGTGGTTTCACTGCGCTGTAACCCAGAGAAAACAATGAGAGGAGACATATCTGTgcccagCGAGTGTCCTGCAGGGACCTGCGACGGCTGTACGTTCCACTTCCTGTGGGAGAGCTCTAGTTCCTGCCCGCGCTGCACCGCTGTCGACTACCACGCCATTGAAGGAGCCTGTAAGGCAGGAGTGCAGGACACAGTGTTTGTGTGGACTGAACCTCGGCTGTGTACTGGAGGGCTGACTCTCCCGCTCACGAGAACGTCCTCATGTGAGGCGATTGATTTCTGGCTGAAGGTGGGCGCTGGGCTTGGAGCGTTCTCTGCTGCTCTGCTCGTCTCTCTGACCTGCTACTTCTGGAAGAAGAACAAAAAGCTGGAGTATAAGTATTCCAAACTCGTGATGTCGGCCAATAAAGAGTGCGAGTTACCTGTGGCAGACAGCTGCGCCATAATGGAAGGAGAAGGAGAGGAGAATGAGGAGGAAGAAGTGGTTTATGCCAACAGGTCTTCTCTTCTGGCTAAGCTAAAGGCTATTGCTACTAAGGGCAACAAGACGAGCGGAGAAGCTGTCCAACTGCAATTCTCCAATACAGAAAAGTCTGTGTGGGGATAGAAGAGGGATGCGGAAAAGAAAGGGATGAATGGAAGTCCCATATCACACGTAGTGGCCTTAAGAAAACAAGGGTACGGGTGCCCGAGGAAGGAAGATTGGTTAAACAAACGAGCCTGCGACGCCTCAGGAACCCGGATGGACTTGTTTTTACGAATATTCCTGTCGAGATTTGTCACTATGCAGTTGTGTATGTGTATCGTAAATGCGTGAAAATTCCCTCCCTCTCCAGTGCCTGGGCTTCTCTAGAAGCTTTTTGGAGCGACAGGCGCGACTTTACACGAGTCCTAGCTTGTCAGAGCGAATGTAGCCAAGGGTCACACAAATACACTCAGACGTTAAGCTTTACTGACAGACGCTTCCAATCCCGGCTAAACAGCACTGGAAAGCCATGTAAAGTGTTGTGTTCGAGTGCAGCCAAAATagactgtttttctttctttctttttttttttttagttaagtaACCTATTTGACTGTGACGGTGACATTCCAAATGAAATACGACATGAATAAAGTCTATGAATAAAGAGATTACAGCAAAGCAGGAGTCATTTCTGTACagctatttttatgatttttcgACATACCTCTGTGTTAATCTGGCTTACAGTATCAAGACAAACACGGGAGATTTCAGGAGAAAAGGATTCCTTCAGAACTGTGACTGCAGACTGAGGTGATGAAACATTTGCAGTCTAATTAAGGAACTTAATGAACTGCCGGTGGgctttttgttcataaaatTTTAAGAGCCATCGACATGAAATCTGGGGAAATGATCTGCAGAGACCCGTATTGATTCTGGATTGAGGTGTAAACCTGTGGTTTACTGTGCCGTTGGGATGTAGTTGTTTTGTTCGGTCCACTACTACTCTGAAGTGTTAGATATACTGTAGGCAATATTATTCACATGAGTAATTCAGTGATTTTtctcattctgtgtgtgtgtgtgtgtgtgtgtttgtgaaattaACTTGTAACTGTGTTCAACTGATGTCAGTTCTTGATAAAATTTGTTTTGATATTGTGTATAATAAATTATCGTTTGCACTCTCAAA
>XM_043264859.1
TTGGGTAACTCCTTTGTGACGTAATTTCTAAGACTTCAAACCGGCTCCGTCGGATGACGTTCTGCGTTGACGTCGCTCGCCGATATGACGGGACGGTCCCGTTATTCCTCTCCGCGAGCGATGGAGCGCACGAGGAAGACCGCGGTCCTCCACCGAAGCCGTTTAGCGCCGGAACACGCGGCGtggatgtgttttgttttcatcctGAACGCGTCCGCGGCGTGCGCCGTTCACCTGCGCCCGTGTAAAGAGGCGGACTACTACTTTCAGTACACGGAGTGTGACAGCACCGGGTCCAGATGGAGGGTGGCCATTCCTCTGAATCCAGGAGAGTGTACTGAACTACCAGAACCTGTGCAGGGCGCCGACTGCACATTCTCGTGCAAAGCGGGGGAGTTTCTGGAGATGTCTGCTCAGGAGTGCACTCAGTGTGCGGCTGGCACTTACTCGCTGGGCAGCGGCCTGCGTTTGGATGAGTGGGACGACATCCCTCCTGGATTCAGCAGCCTGGCGACCAGCCCTGATAACACACGCAGCGGACAGAATGTGTCCACCTGCAGCAGcgcAAAGTGGGTCGCTCAGGGCACGTATCTGGAGTCTAGCAGAGATGAGTGTACTGTGTCTCTGATCTACACTGTACACTTGAAGAAGCCGGGGTCAGCGTCCTTTGAGTACCAGTATGTGGATAACAGCATCTTCTTTGAGTTCTTTattcAGAACGACCAGTGTCAAGAGATGGACCaggattcaaataaaaaatggatCAAATTAACGACTCACGGAGAGTGGGGAACACACAGTGTGAATCTGAATTCTGGCACTAATATTCTGTATTGGAGAACCACTAGAGTCACACTCGGCTCTAAAGCAGTCAAGCCTGTGCTCCTGAAGAACATACGAATTGAAGGTGTGGCGTATACATCGGAGTGTTTTCCATGTAAGCCTGGGACGTTCAGTCGCACCCCAGGCTCGTCCTCCTGTGAGCCCTGTCCACGGGACACGTACTCCGGCCGAGGGGCCAGCTCCTGCACACCTtgtaacacaaaaacacactacGCCTCAGAAGGCTCTGCCATGTGCAAAAGTAGACCTCCATGCTCAGAAAAAGACTACATCCAGACGTACACCACCTGTGATAAAGATGGaaagACTCAGGTCATATATAAGTGGGTAGAACCTCAGATTTGTTTGGCATCTGCTGCTGGCGCAGTAACACTGCCCCCTTCCGGTCAGCGCCAGCCTTGTCCGCCCTGTAATCCTGGTTTCTATAACAACGACACTGCCACCTGTTCTCCCTGTCCACCCGGGACGTACTCCGATGGGGTCAAAGCATGCCGGCCCTGTCCAGCTGGCACAGAGCCTGTCCTCGGCTATGAGTACAAGTGGTGGAACATGCTGCCTGCCAACGTGAAGACATCCTGCTTCAACGTGGCCAACAACAATTGTGATGGATTGAATGGTTGGGCGGTGGCGGGTGATCACGTACAATCAGGAGCAGGTCGATCAGATAACGATTATCTCATATTAACTCTCACTGTGCCTGGATTCAAGTTGCCTGTGTCAGTTCGAGGAGCATCCGGCGGTGAGTACGGCCGGATCACTTTTGAGTTTGAAACCAGCTGCTCGGCTGACTGTGAGTTCTACTTCATGACGGATGTAAACAAAAGGAGCACAAATGTCATTGAATCGTGGGAGGGGAGTAAAAGCAAACAGAGTTACACACACATCATGGCTGAAGACTCTCCTGTTGCGTTCACCTGGGCTTTTCAACGCACCAGTCAGGCTAGTGACGTGCGTCGGTATGTAAACGACCTGGTGAAGATTTACTCTGTGACTGTCACTAATGCCATGGACGGGGTGGCATCAGCGTGTCGGCCGTGTGCCCTGCAGTCTCAGCAGGCCGGCTCCTCCTGTGTGCCCTGTCCGGCTGGACACTACATTGATAAAGACACCAACCGGTGCCAGGAGTGCCCTCCTAACACCATCCTGTCAGGGCATCGCATCTACGGCAAAGAAGCGTGCCAGCCGTGTGGGCCAGGCAGCAAAAGCAACAAGGAGCACAGCGTGTGTTTTAGTGACTGTTTGTTCACATACACTGACCAGAATCGGACACTTCGGTATGACTTCAGTGCTCTGAACTCCGCTGGCTCTATCATGAACGGGCCCAGCTTCACTGCAAAAGGCACAAAGTATTACCACCTCTTCAATATCAGCCTGTGTGGAGCTGAGGGTCACAAGGCTGCGGTCTGCAGAGATAATGTCACAAACCTGCCCAATGAGGACGCTGAAGGCGGTCAGCTGGGCAGTTCAGTGGAGGCTTTTCTCTGTCAATCAACAATTATTCCATCTGATGGGCGGGGCTTAAGAACAGCTCTTTCCTCTCAGTCTATTAGCCTGGCTGACACTTTTCAGGGAGCCACAGTAGAGAAAACTCAACTTAACGGAATAACCACCAGACCAGAACTATTTCCATCTGCATCCGAGAGAATCCCAGATGTCCACTTCTTCTATCGATCTTCGCAGGTCACAACCTCGTGTCCGAGAGGCAGGAATGCAGTGGTTTCACTGCGCTGTAACCCAGAGAAAACAATGAGAGGAGACATATCTGTgcccagCGAGTGTCCTGCAGGGACCTGCGACGGCTGTACGTTCCACTTCCTGTGGGAGAGCTCTAGTTCCTGCCCGCGCTGCACCGCTGTCGACTACCACGCCATTGAAGGAGCCTGTAAGGCAGGAGTGCAGGACACAGTGTTTGTGTGGACTGAACCTCGGCTGTGTACTGGAGGGCTGACTCTCCCGCTCACGAGAACGTCCTCATGTGAGGCGATTGATTTCTGGCTGAAGGTGGGCGCTGGGCTTGGAGCGTTCTCTGCTGCTCTGCTCGTCTCTCTGACCTGCTACTTCTGGAAGAAGAACAAAAAGCTGGAGTATAAGTATTCCAAACTCGTGATGTCGGCCAATAAAGAGTGCGAGTTACCTGTGGCAGACAGCTGCGCCATAATGGAAGGAGAAGGAGAGGAGAATGAGGAGGAAGAAGTGGTTTATGCCAACAGGTCTTCTCTTCTGGCTAAGCTAAAGGCTATTGCTACTAAGTATCAAGACAAACACGGGAGATTTCAGGAGAAAAGGATTCCTTCAGAACTGTGACTGCAGACTGAGGTGATGAAACATTTGCAGTCTAATTAAGGAACTTAATGAACTGCCGGTGGgctttttgttcataaaatTTTAAGAGCCATCGACATGAAATCTGGGGAAATGATCTGCAGAGACCCGTATTGATTCTGGATTGAGGTGTAAACCTGTGGTTTACTGTGCCGTTGGGATGTAGTTGTTTTGTTCGGTCCACTACTACTCTGAAGTGTTAGATATACTGTAGGCAATATTATTCACATGAGTAATTCAGTGATTTTtctcattctgtgtgtgtgtgtgtgtgtgtgtttgtgaaattaACTTGTAACTGTGTTCAACTGATGTCAGTTCTTGATAAAATTTGTTTTGATATTGTGTATAATAAATTATCGTTTGCACTCTCAAA

Function

NR:

description
PREDICTED: UPF0577 protein KIAA1324-like homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264856.1 True 4215 mRNA 0.50 22 21176922 21193969
XM_043264859.1 False 3541 mRNA 0.51 22 21176917 21193969

Neighbor

gene id symbol gene type direction distance location
tmem243a tmem243a,LOC107560025,LOC107665549,LOC107710379 coding upstream 125 21174591 ~ 21176792 (+)
si:dkey-5i3.5 LOC107710366,LOC107671161,LOC107559433,LOC107665548,LOC107599782 coding upstream 2596 21167515 ~ 21174321 (+)
impdh1a impdh1a,LOC107559456,LOC107665545,LOC107710381,LOC107599814,LOC107671158,LOC108442450 coding upstream 22319 21136806 ~ 21154598 (+)
cpt1b cpt1b,LOC107686536,LOC107599889,LOC107671150,LOC107710383,LOC107559523 coding upstream 196218 20973515 ~ 20980699 (+)
LOC122362691 LOC107719968,LOC107671151,LOC101886608 coding upstream 204075 20970092 ~ 20972842 (+)
sema3d sema3d,LOC107559401,LOC107723940,LOC107672594,LOC107729993 coding downstream 102129 21296098 ~ 21328330 (+)
sema3ab sema3ab,sema3a,LOC107665547,LOC107672583 coding downstream 184959 21378928 ~ 21408841 (+)
sema3e sema3e,LOC107665550,LOC107723938,LOC107563409,LOC107738421,LOC107559846 coding downstream 234758 21428727 ~ 21466593 (+)
pclob LOC107559387,LOC107723935,LOC107672584,LOC107665542,LOC107738431,LOC107563410 coding downstream 283359 21477328 ~ 21546134 (+)
LOC122363109 cacna2d1,LOC107672590,LOC107738419,LOC107673139 coding downstream 356176 21550145 ~ 21638322 (+)
G128158 NA non-coding upstream 10844 21165272 ~ 21166073 (+)
G128157 LOC107559445,LOC107665544,LOC107710380 non-coding upstream 14166 21161886 ~ 21162751 (+)
G128149 NA non-coding upstream 47884 21128553 ~ 21129033 (+)
G128148 NA non-coding upstream 95626 21080769 ~ 21081291 (+)
G127935 NA non-coding upstream 239475 20894777 ~ 20937442 (+)
G128216 NA non-coding downstream 272809 21466778 ~ 21468553 (+)
G128251 NA non-coding downstream 444441 21638410 ~ 21641629 (+)
LOC122323089 NA non-coding downstream 500477 21694446 ~ 21835021 (+)
G128318 NA non-coding downstream 839702 22033671 ~ 22068953 (+)
G128329 tspan9a,LOC107559293,LOC107738414,LOC107587031,LOC107672591,LOC107084745,LOC108414266 non-coding downstream 915504 22109473 ~ 22110458 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 535858 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 576398 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 620290 20551148 ~ 20556627 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other upstream 627560 20545992 ~ 20549357 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other upstream 1083316 20067678 ~ 20093601 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other downstream 1206975 22400944 ~ 22411957 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other downstream 1240837 22434806 ~ 22438679 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 2263131 23457100 ~ 23736848 (+)
G128858 NA other downstream 3255796 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 3389876 24583845 ~ 24588337 (+)

Expression


Co-expression Network